| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044834
Identifier: 66044834
GI number: 66044834
Start: 1788750
End: 1789145
Strand: Direct
Name: 66044834
Synonym: Psyr_1589
Alternate gene names: NA
Gene position: 1788750-1789145 (Clockwise)
Preceding gene: 66044831
Following gene: 66044835
Centisome position: 29.35
GC content: 52.27
Gene sequence:
>396_bases ATGAAAAATCGTTTTAAACTGTTTGTAGGCACTACGGCCTTGATCCTCTCTGCGAGCGCGCTGGCCAAGCCAGTACTGCA CACGGCGACCATCGACCAGCACGGCAATATCGTTGCTCAGTCGTCGCCCTGGATCAAGTCTGTAAGTTACAGCAGCCAGA AAGACTACTTCGCGACGTATAAAGTGCTCTTCAAGGAAGGGCAGTTTAAAAAGTCTCCAGGGTTCTGCTCGGTGTCTTCC ATTGATACCAGTGATCATGAGCGGCTGTTCTACGGGCACGCCAAGTTGGGCGGCGCTGCGACAACAGAACAGGTCAATGT ATTGGGACTTATGGTCGGTAAGCGGGGGGCTTCGGGTGACTCCTCAATGAGTTTCCAGTTGGCCTGCAGTAATTGA
Upstream 100 bases:
>100_bases GTATCCAGACATTAAACGTTTTTTGATGATCCCAGATAATTAATCCAGACCGACCGCCGAATCGAGGCGGTCTGATACGA TAATGAGCAAAGGAATGACT
Downstream 100 bases:
>100_bases TTCAATGAACCCCGCCTGGTGCGGGGTTTTTTACGGCGGTCTGATCTGGAGGCGCACCTTCCGGCTTTCCATCCAGCGCA TTTGCGCAGATCATTCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MKNRFKLFVGTTALILSASALAKPVLHTATIDQHGNIVAQSSPWIKSVSYSSQKDYFATYKVLFKEGQFKKSPGFCSVSS IDTSDHERLFYGHAKLGGAATTEQVNVLGLMVGKRGASGDSSMSFQLACSN
Sequences:
>Translated_131_residues MKNRFKLFVGTTALILSASALAKPVLHTATIDQHGNIVAQSSPWIKSVSYSSQKDYFATYKVLFKEGQFKKSPGFCSVSS IDTSDHERLFYGHAKLGGAATTEQVNVLGLMVGKRGASGDSSMSFQLACSN >Mature_131_residues MKNRFKLFVGTTALILSASALAKPVLHTATIDQHGNIVAQSSPWIKSVSYSSQKDYFATYKVLFKEGQFKKSPGFCSVSS IDTSDHERLFYGHAKLGGAATTEQVNVLGLMVGKRGASGDSSMSFQLACSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14100; Mature: 14100
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRFKLFVGTTALILSASALAKPVLHTATIDQHGNIVAQSSPWIKSVSYSSQKDYFATY CCCEEEEEECHHHHHHHHHHHHHHHHHEEEECCCCCEEECCCCCEEECCCCCCCCHHHHE KVLFKEGQFKKSPGFCSVSSIDTSDHERLFYGHAKLGGAATTEQVNVLGLMVGKRGASGD EEEECCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCC SSMSFQLACSN CCEEEEEEECC >Mature Secondary Structure MKNRFKLFVGTTALILSASALAKPVLHTATIDQHGNIVAQSSPWIKSVSYSSQKDYFATY CCCEEEEEECHHHHHHHHHHHHHHHHHEEEECCCCCEEECCCCCEEECCCCCCCCHHHHE KVLFKEGQFKKSPGFCSVSSIDTSDHERLFYGHAKLGGAATTEQVNVLGLMVGKRGASGD EEEECCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCC SSMSFQLACSN CCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA