| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is cysK [H]
Identifier: 66044828
GI number: 66044828
Start: 1777829
End: 1778803
Strand: Direct
Name: cysK [H]
Synonym: Psyr_1583
Alternate gene names: 66044828
Gene position: 1777829-1778803 (Clockwise)
Preceding gene: 66044826
Following gene: 66044829
Centisome position: 29.17
GC content: 60.62
Gene sequence:
>975_bases ATGAGCCGTATCTACGCTGATAACGCCCATTCCATCGGTAATACGCCGTTGGTGCAGATCAACCGTATCGCGCCGCGCGG TGTCACCATTCTGGCCAAGATCGAAGGGCGTAATCCGGGCTATTCCGTCAAGTGCCGTATCGGCGCCAACATGATCTGGG ACGCCGAAAGCAGCGGCAGGCTCAAACCGGGCATGACCATCGTCGAGCCGACCTCTGGCAACACCGGCATCGGTCTGGCC TTCGTTGCCGCTGCCCGTGGCTACAAGCTGATGCTCACCATGCCCGCTTCCATGAGCATAGAACGTCGCAAGGTCCTCAA GGCACTGGGCGCAGAACTGGTGCTGACCGAAGCGGCCAAGGGCATGAAAGGCGCGATTGCCAAGGCCGAAGAACTGCTGG CAGGCAACCCCGGGAAATATTTCATGCCGGCGCAATTCGAAAACCCGGCCAACCCGGCCATCCATGAAAAAACCACTGGC CCGGAAATCTGGGCAGACACCGACGGTGCCATCGATGTCCTGGTGGCAGGCGTAGGAACTGGCGGGACTATCACCGGTAT CTCCCGGTATATCAAGCACACCGAAGGCAAACCGATCCTGTCGGTCGCGGTCGAGCCGGACGGTTCGCCGATCATCACCC AGGCGATGGCCGGTGAAACGATCACGCCCAGCCCGCACAAGATTCAGGGCATCGGCGCCGGCTTCATCCCGAAAAACCTC GACCTGTCGATTGTCGACCGGGTGGAGCGTGTCACCGATGAAGAGTCCAAGGCCATGGCGCGGCGTCTGATGCAGGAGGA GGGCATTCTCTGCGGTATTTCGTGCGGCGCGGCAATGGCGGCGGCCGTCCGTCTGGCTGAAAAGCCGGAGATGCAGGGCA AGACGATCGTGGTGGTCCTGCCGGACTCCGGCGAACGTTACCTGTCGAGCATGCTGTTCAGCGATCTGTTTACCGATCAG GAGCTTTCCCAGTAA
Upstream 100 bases:
>100_bases GATTGACTGCTCGCGCCGTCATCCGTTCGGTCAGACTGGACGCCCCACAGTTGGCGGCATAGGCTTTGGATCTTTAACCG ATGTGCACAAGGACACCCTC
Downstream 100 bases:
>100_bases CACATCTTCGCAAGCGCGCACTTCATGCGGGCAACGCAAGGGTTTATGATGGCCAGCTTACGACTCGCCGGACGATCAGC GCTGTCCGCCCGGCGCTCCA
Product: cysteine synthase K/M:cysteine synthase A
Products: NA
Alternate protein names: CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine sulfhydrylase A; Sulfate starvation-induced protein 5; SSI5 [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSRIYADNAHSIGNTPLVQINRIAPRGVTILAKIEGRNPGYSVKCRIGANMIWDAESSGRLKPGMTIVEPTSGNTGIGLA FVAAARGYKLMLTMPASMSIERRKVLKALGAELVLTEAAKGMKGAIAKAEELLAGNPGKYFMPAQFENPANPAIHEKTTG PEIWADTDGAIDVLVAGVGTGGTITGISRYIKHTEGKPILSVAVEPDGSPIITQAMAGETITPSPHKIQGIGAGFIPKNL DLSIVDRVERVTDEESKAMARRLMQEEGILCGISCGAAMAAAVRLAEKPEMQGKTIVVVLPDSGERYLSSMLFSDLFTDQ ELSQ
Sequences:
>Translated_324_residues MSRIYADNAHSIGNTPLVQINRIAPRGVTILAKIEGRNPGYSVKCRIGANMIWDAESSGRLKPGMTIVEPTSGNTGIGLA FVAAARGYKLMLTMPASMSIERRKVLKALGAELVLTEAAKGMKGAIAKAEELLAGNPGKYFMPAQFENPANPAIHEKTTG PEIWADTDGAIDVLVAGVGTGGTITGISRYIKHTEGKPILSVAVEPDGSPIITQAMAGETITPSPHKIQGIGAGFIPKNL DLSIVDRVERVTDEESKAMARRLMQEEGILCGISCGAAMAAAVRLAEKPEMQGKTIVVVLPDSGERYLSSMLFSDLFTDQ ELSQ >Mature_323_residues SRIYADNAHSIGNTPLVQINRIAPRGVTILAKIEGRNPGYSVKCRIGANMIWDAESSGRLKPGMTIVEPTSGNTGIGLAF VAAARGYKLMLTMPASMSIERRKVLKALGAELVLTEAAKGMKGAIAKAEELLAGNPGKYFMPAQFENPANPAIHEKTTGP EIWADTDGAIDVLVAGVGTGGTITGISRYIKHTEGKPILSVAVEPDGSPIITQAMAGETITPSPHKIQGIGAGFIPKNLD LSIVDRVERVTDEESKAMARRLMQEEGILCGISCGAAMAAAVRLAEKPEMQGKTIVVVLPDSGERYLSSMLFSDLFTDQE LSQ
Specific function: Cysteine biosynthesis. [C]
COG id: COG0031
COG function: function code E; Cysteine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cysteine synthase/cystathionine beta- synthase family [H]
Homologues:
Organism=Homo sapiens, GI295821202, Length=326, Percent_Identity=42.9447852760736, Blast_Score=225, Evalue=4e-59, Organism=Homo sapiens, GI295821200, Length=326, Percent_Identity=42.9447852760736, Blast_Score=225, Evalue=4e-59, Organism=Homo sapiens, GI4557415, Length=326, Percent_Identity=42.9447852760736, Blast_Score=225, Evalue=4e-59, Organism=Escherichia coli, GI1788754, Length=325, Percent_Identity=69.5384615384615, Blast_Score=440, Evalue=1e-125, Organism=Escherichia coli, GI2367138, Length=314, Percent_Identity=40.7643312101911, Blast_Score=216, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17535051, Length=308, Percent_Identity=50.974025974026, Blast_Score=283, Evalue=6e-77, Organism=Caenorhabditis elegans, GI115535073, Length=309, Percent_Identity=55.3398058252427, Blast_Score=281, Evalue=4e-76, Organism=Caenorhabditis elegans, GI17562970, Length=330, Percent_Identity=45.7575757575758, Blast_Score=266, Evalue=1e-71, Organism=Caenorhabditis elegans, GI32566674, Length=314, Percent_Identity=46.4968152866242, Blast_Score=256, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17561720, Length=324, Percent_Identity=46.6049382716049, Blast_Score=240, Evalue=9e-64, Organism=Caenorhabditis elegans, GI32566672, Length=232, Percent_Identity=45.6896551724138, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17534315, Length=320, Percent_Identity=41.5625, Blast_Score=167, Evalue=6e-42, Organism=Caenorhabditis elegans, GI25147552, Length=324, Percent_Identity=37.6543209876543, Blast_Score=156, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17561716, Length=131, Percent_Identity=43.5114503816794, Blast_Score=92, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6321594, Length=326, Percent_Identity=38.9570552147239, Blast_Score=196, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6321449, Length=336, Percent_Identity=34.8214285714286, Blast_Score=143, Evalue=4e-35, Organism=Drosophila melanogaster, GI24643623, Length=320, Percent_Identity=40.9375, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI20129101, Length=320, Percent_Identity=40.9375, Blast_Score=182, Evalue=3e-46,
Paralogues:
None
Copy number: 2820 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001216 - InterPro: IPR005856 - InterPro: IPR005859 - InterPro: IPR001926 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =2.5.1.47 [H]
Molecular weight: Translated: 34330; Mature: 34199
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00901 CYS_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIYADNAHSIGNTPLVQINRIAPRGVTILAKIEGRNPGYSVKCRIGANMIWDAESSGR CCCEECCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCEEEEECCCCCC LKPGMTIVEPTSGNTGIGLAFVAAARGYKLMLTMPASMSIERRKVLKALGAELVLTEAAK CCCCCEEEECCCCCCCCHHHEEHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEHHHHC GMKGAIAKAEELLAGNPGKYFMPAQFENPANPAIHEKTTGPEIWADTDGAIDVLVAGVGT CHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCC GGTITGISRYIKHTEGKPILSVAVEPDGSPIITQAMAGETITPSPHKIQGIGAGFIPKNL CCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEHHHCCCCCCCCCCEEEECCCCCCCCCC DLSIVDRVERVTDEESKAMARRLMQEEGILCGISCGAAMAAAVRLAEKPEMQGKTIVVVL CHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCCCCCEEEEEE PDSGERYLSSMLFSDLFTDQELSQ CCCCHHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure SRIYADNAHSIGNTPLVQINRIAPRGVTILAKIEGRNPGYSVKCRIGANMIWDAESSGR CCEECCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCEEEEECCCCCC LKPGMTIVEPTSGNTGIGLAFVAAARGYKLMLTMPASMSIERRKVLKALGAELVLTEAAK CCCCCEEEECCCCCCCCHHHEEHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEHHHHC GMKGAIAKAEELLAGNPGKYFMPAQFENPANPAIHEKTTGPEIWADTDGAIDVLVAGVGT CHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCC GGTITGISRYIKHTEGKPILSVAVEPDGSPIITQAMAGETITPSPHKIQGIGAGFIPKNL CCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEHHHCCCCCCCCCCEEEECCCCCCCCCC DLSIVDRVERVTDEESKAMARRLMQEEGILCGISCGAAMAAAVRLAEKPEMQGKTIVVVL CHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCCCCCEEEEEE PDSGERYLSSMLFSDLFTDQELSQ CCCCHHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]