Click here to switch to the map view.

The map label for this gene is copB [H]

Identifier: 66044815

GI number: 66044815

Start: 1764819

End: 1765727

Strand: Reverse

Name: copB [H]

Synonym: Psyr_1570

Alternate gene names: 66044815

Gene position: 1765727-1764819 (Counterclockwise)

Preceding gene: 66044816

Following gene: 66044814

Centisome position: 28.98

GC content: 64.58

Gene sequence:

>909_bases
ATGAGGACCTTGATGTTGAGCAGAACGCTGAATTCGCCCCGCCTGCCGATGCTGTTGCTGGCCGCCGGGCTGACCGCCAC
GCCGTGGGCCTCGACCTTGGCCGCCGGAATGGAGGGCATGGACCACGACAGCCATGCGATGCACATGAACGCCGGCGACA
GCGAGGACACGCCCTCGACACAGGCTGCGCCCAACCAGAGCCGAACCCCGATCCCGCCGATCACTGATGCGGACCGGGCT
GCGGTGTACACCAGCCACGCGGGCCATCAGGTCCATGACAGCGCCATCAACAGTTACTTTCTGGCCGACAAGCTGGAATG
GCAGGACGCCAACGACGGCAGCGCGCTGGCCTGGGACCTGTCCGGCTGGATTGGCGGAGATATCGACCGCCTGTTGCTGC
GCTCCGAAGGTGAGCGAACCAACGGCAAGACCGAAGAAGCGGAAATCCAGGCGTTGTGGGGCCACTCGATCAGCCCTTGG
TGGGACGTGGTCGCCGGAGCACGTCAGGATTTCAAACCGGGCGCGCCGCAAACCTGGGCCGCCTTCGGCCTGCAGGGGCA
AGCCATTTCGGATCTGGATATCGAGGCCACCGCGTTCATCGGTGAAGCCGGACAGACCGCCGCTCGCCTGGAAGCCGACT
ACGACCTCCAACTGACCAACAATCTGGTGCTGCAGCCCACCGCGGAGCTGAACTTCTACGGCAAGAACGACCCGCAACGC
GGCAATGGTTCGGGCCTGTCGACCAGCGAGTTCGGCCTCAGACTGCGCTACGAGATCACCCCGCAATTCGCGCCTTATGT
CGGGGTGAGCTGGAACCGCTCCTACGGCAAGACCGCCGATTACGCGCGCGAAGACGACGAAGACACCCAGGACGCGCGAC
TGGTGGTCGGCGTGCGCATGTGGTTCTGA

Upstream 100 bases:

>100_bases
GCTATCGCGTGACCGCCGATGCGCTGGGCCGTTGGGCTTATCACTGTCACATGCTGTACCACATGGAAATGGGCATGTTC
CGCGAAGTGCGGGTGGAAGA

Downstream 100 bases:

>100_bases
ACACAGTCAATGGTATTGCTCTGAGGCTACCGTATAATCCCCGGTTTTCTTCAGAGCACCCTCCCCGTGGCCAACAAACG
GTACGCCTGCATCGGTCTTT

Product: copper resistance B precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRTLMLSRTLNSPRLPMLLLAAGLTATPWASTLAAGMEGMDHDSHAMHMNAGDSEDTPSTQAAPNQSRTPIPPITDADRA
AVYTSHAGHQVHDSAINSYFLADKLEWQDANDGSALAWDLSGWIGGDIDRLLLRSEGERTNGKTEEAEIQALWGHSISPW
WDVVAGARQDFKPGAPQTWAAFGLQGQAISDLDIEATAFIGEAGQTAARLEADYDLQLTNNLVLQPTAELNFYGKNDPQR
GNGSGLSTSEFGLRLRYEITPQFAPYVGVSWNRSYGKTADYAREDDEDTQDARLVVGVRMWF

Sequences:

>Translated_302_residues
MRTLMLSRTLNSPRLPMLLLAAGLTATPWASTLAAGMEGMDHDSHAMHMNAGDSEDTPSTQAAPNQSRTPIPPITDADRA
AVYTSHAGHQVHDSAINSYFLADKLEWQDANDGSALAWDLSGWIGGDIDRLLLRSEGERTNGKTEEAEIQALWGHSISPW
WDVVAGARQDFKPGAPQTWAAFGLQGQAISDLDIEATAFIGEAGQTAARLEADYDLQLTNNLVLQPTAELNFYGKNDPQR
GNGSGLSTSEFGLRLRYEITPQFAPYVGVSWNRSYGKTADYAREDDEDTQDARLVVGVRMWF
>Mature_302_residues
MRTLMLSRTLNSPRLPMLLLAAGLTATPWASTLAAGMEGMDHDSHAMHMNAGDSEDTPSTQAAPNQSRTPIPPITDADRA
AVYTSHAGHQVHDSAINSYFLADKLEWQDANDGSALAWDLSGWIGGDIDRLLLRSEGERTNGKTEEAEIQALWGHSISPW
WDVVAGARQDFKPGAPQTWAAFGLQGQAISDLDIEATAFIGEAGQTAARLEADYDLQLTNNLVLQPTAELNFYGKNDPQR
GNGSGLSTSEFGLRLRYEITPQFAPYVGVSWNRSYGKTADYAREDDEDTQDARLVVGVRMWF

Specific function: Exact function not known. Could be involved in copper resistance [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 33014; Mature: 33014

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLMLSRTLNSPRLPMLLLAAGLTATPWASTLAAGMEGMDHDSHAMHMNAGDSEDTPST
CCEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCC
QAAPNQSRTPIPPITDADRAAVYTSHAGHQVHDSAINSYFLADKLEWQDANDGSALAWDL
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHEEEECCCCCCCCCCCCEEEEEC
SGWIGGDIDRLLLRSEGERTNGKTEEAEIQALWGHSISPWWDVVAGARQDFKPGAPQTWA
CCCCCCCHHHHHHHCCCCCCCCCCCHHHEEEECCCCCCHHHHHHHCCHHCCCCCCCCHHH
AFGLQGQAISDLDIEATAFIGEAGQTAARLEADYDLQLTNNLVLQPTAELNFYGKNDPQR
HHCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCEEEECCCEEEEECCCEEEECCCCCCC
GNGSGLSTSEFGLRLRYEITPQFAPYVGVSWNRSYGKTADYAREDDEDTQDARLVVGVRM
CCCCCCCCCCCCEEEEEEECCCCCCEEECEECCCCCCCCCCCCCCCCCCCCCEEEEEEEE
WF
CC
>Mature Secondary Structure
MRTLMLSRTLNSPRLPMLLLAAGLTATPWASTLAAGMEGMDHDSHAMHMNAGDSEDTPST
CCEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCC
QAAPNQSRTPIPPITDADRAAVYTSHAGHQVHDSAINSYFLADKLEWQDANDGSALAWDL
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHEEEECCCCCCCCCCCCEEEEEC
SGWIGGDIDRLLLRSEGERTNGKTEEAEIQALWGHSISPWWDVVAGARQDFKPGAPQTWA
CCCCCCCHHHHHHHCCCCCCCCCCCHHHEEEECCCCCCHHHHHHHCCHHCCCCCCCCHHH
AFGLQGQAISDLDIEATAFIGEAGQTAARLEADYDLQLTNNLVLQPTAELNFYGKNDPQR
HHCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCEEEECCCEEEEECCCEEEECCCCCCC
GNGSGLSTSEFGLRLRYEITPQFAPYVGVSWNRSYGKTADYAREDDEDTQDARLVVGVRM
CCCCCCCCCCCCEEEEEEECCCCCCEEECEECCCCCCCCCCCCCCCCCCCCCEEEEEEEE
WF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]