| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044781
Identifier: 66044781
GI number: 66044781
Start: 1723173
End: 1724033
Strand: Reverse
Name: 66044781
Synonym: Psyr_1534
Alternate gene names: NA
Gene position: 1724033-1723173 (Counterclockwise)
Preceding gene: 66044789
Following gene: 66044780
Centisome position: 28.29
GC content: 54.47
Gene sequence:
>861_bases ATGTACATAACCTCGCTTTTGTCCACCAAAGGTGGTGTCGGTAAAACCACTTTGGCTGCCAACATCGGCGGCTTCTGCGC CGACGCCGGCTTGAGGGTCCTCCTCCTCGACATGGACCCTGTACAGCCTTCACTGTCCTCCTATTACCCAATGGCACAGG AAGTCAGCGGCGGCATATTCGACCTCATCGCACATAACCTGACTGATCCAGAGCGAATCATATCGAGGACAAGCATCCCG AACCTGTCCTTGATCTTGTCGAACGACCCCAACAACCAGTTGATTAGCCTCCTGCTTCAGGCTGCGGATGGTCGTCTGCG ATTGGCTTCTCTGCTGAAAGCTTTCGAGGGTCAGTTCGACCTGATTCTCATTGATACCCAGGGCGCACGAAGCGTCATGT TGGAGATGGTGGTTTTAGCGTCAGATCTTGCTGTATCCCCGTTGCCACCGAACATGCTCAGCGCCCGCGAGTTTAACCGT GGGACGTTGCAAATGCTTGAAGGACTGCGTCCTTACTCGAGGCTTGGACTGCACGTCCCTCCAATCAAGGTTGTAGTCAA CTGCCTCGACCAGACCGTTGACGCTCGCGGGATTCATGACGCCATCAGAAAGACCTTCGCGGACAACATGGAAGTCGATG TCCTCAACAGCACAGTTCCTGCTTCAGTAATTTTCCGCGAGGGATCTACAGCAGGCATGTCGGCACATCGGCTCGAATAC AAAAAACCTTCCAATCGACGCGCGCCTAGCGCGCTACAGGTCATTCGAGAGCTTGTGGTTGAGCTTTTTCCGCAGTGGAC CGACCGTTTCGAGGCGATGACTGAATCCGCCGTAGAGGCCCTGGTAAAAGGGGGTCAATGA
Upstream 100 bases:
>100_bases AAGCCAATTGGTTTCACACCCTCAGTTTAGGCAGAACCTCCTGATGAAGGCTCTGGATCCAATCCGCAGTCTCTAATGTC CCCATTAGAGGCTTCAAATC
Downstream 100 bases:
>100_bases GATGGCAAAGACAAATCTCACGGAAGCTTCCGGCATTACTCCTCAGTTGATGCAGAAGCTCAACGAGCAGTACGACTCAT CACAACTGCGCGCCGCTCAG
Product: chromosome partitioning related protein
Products: NA
Alternate protein names: Cobyrinic Acid A C-Diamide Synthase; Chromosome Partitioning Protein; Chromosome Partitioning Related Protein; Chromosome Partitioning-Like Protein; ParA Family Protein; Chromosome Partitioning ATPase; ATPase Involved In Chromosome Partitioning; Partitioning Protein A; Soj Family Protein; Partitioning Protein; Regulatory Protein; Chromosome Partitioning-Related Protein; ParA Family ATPase; SOJ-Like Transmembrane Protein; Chromosome Partitioning Related Protein SOJ-Like Protein; Chromosome Partitioning Protein ParA; Plasmid Partitioning Protein
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MYITSLLSTKGGVGKTTLAANIGGFCADAGLRVLLLDMDPVQPSLSSYYPMAQEVSGGIFDLIAHNLTDPERIISRTSIP NLSLILSNDPNNQLISLLLQAADGRLRLASLLKAFEGQFDLILIDTQGARSVMLEMVVLASDLAVSPLPPNMLSAREFNR GTLQMLEGLRPYSRLGLHVPPIKVVVNCLDQTVDARGIHDAIRKTFADNMEVDVLNSTVPASVIFREGSTAGMSAHRLEY KKPSNRRAPSALQVIRELVVELFPQWTDRFEAMTESAVEALVKGGQ
Sequences:
>Translated_286_residues MYITSLLSTKGGVGKTTLAANIGGFCADAGLRVLLLDMDPVQPSLSSYYPMAQEVSGGIFDLIAHNLTDPERIISRTSIP NLSLILSNDPNNQLISLLLQAADGRLRLASLLKAFEGQFDLILIDTQGARSVMLEMVVLASDLAVSPLPPNMLSAREFNR GTLQMLEGLRPYSRLGLHVPPIKVVVNCLDQTVDARGIHDAIRKTFADNMEVDVLNSTVPASVIFREGSTAGMSAHRLEY KKPSNRRAPSALQVIRELVVELFPQWTDRFEAMTESAVEALVKGGQ >Mature_286_residues MYITSLLSTKGGVGKTTLAANIGGFCADAGLRVLLLDMDPVQPSLSSYYPMAQEVSGGIFDLIAHNLTDPERIISRTSIP NLSLILSNDPNNQLISLLLQAADGRLRLASLLKAFEGQFDLILIDTQGARSVMLEMVVLASDLAVSPLPPNMLSAREFNR GTLQMLEGLRPYSRLGLHVPPIKVVVNCLDQTVDARGIHDAIRKTFADNMEVDVLNSTVPASVIFREGSTAGMSAHRLEY KKPSNRRAPSALQVIRELVVELFPQWTDRFEAMTESAVEALVKGGQ
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31114; Mature: 31114
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYITSLLSTKGGVGKTTLAANIGGFCADAGLRVLLLDMDPVQPSLSSYYPMAQEVSGGIF CCHHHHHHCCCCCCCHHHHHHCCCHHHCCCCEEEEEECCCCCCCHHHHCCCHHHHCCHHH DLIAHNLTDPERIISRTSIPNLSLILSNDPNNQLISLLLQAADGRLRLASLLKAFEGQFD HHHHHCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEE LILIDTQGARSVMLEMVVLASDLAVSPLPPNMLSAREFNRGTLQMLEGLRPYSRLGLHVP EEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHCCCHHHHCCCCCC PIKVVVNCLDQTVDARGIHDAIRKTFADNMEVDVLNSTVPASVIFREGSTAGMSAHRLEY HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCHHHHHCC KKPSNRRAPSALQVIRELVVELFPQWTDRFEAMTESAVEALVKGGQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYITSLLSTKGGVGKTTLAANIGGFCADAGLRVLLLDMDPVQPSLSSYYPMAQEVSGGIF CCHHHHHHCCCCCCCHHHHHHCCCHHHCCCCEEEEEECCCCCCCHHHHCCCHHHHCCHHH DLIAHNLTDPERIISRTSIPNLSLILSNDPNNQLISLLLQAADGRLRLASLLKAFEGQFD HHHHHCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEE LILIDTQGARSVMLEMVVLASDLAVSPLPPNMLSAREFNRGTLQMLEGLRPYSRLGLHVP EEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHCCCHHHHCCCCCC PIKVVVNCLDQTVDARGIHDAIRKTFADNMEVDVLNSTVPASVIFREGSTAGMSAHRLEY HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCHHHHHCC KKPSNRRAPSALQVIRELVVELFPQWTDRFEAMTESAVEALVKGGQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA