| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044776
Identifier: 66044776
GI number: 66044776
Start: 1719625
End: 1720032
Strand: Reverse
Name: 66044776
Synonym: Psyr_1529
Alternate gene names: NA
Gene position: 1720032-1719625 (Counterclockwise)
Preceding gene: 66044777
Following gene: 66044775
Centisome position: 28.23
GC content: 54.9
Gene sequence:
>408_bases ATGCAGCTATATCACACTATTGAAGAAGATCTGCCGGTCCAGTCGGACCGGGAAAAAGAGCGCCTCCGGAGCGATATCGA GAAGGCGATGGCTGATTACTTAAGTCGTGGGGGCGCTATCAACCAGGTTGAAGCGAGCCAGCGCTCGAATGACAGCTCAT TCATTATCAACCCTGAAAAAACCGCACAGTTGAAGGCGGATACCAGCGCTCGTGGGCGGAAAAAAACAAACGATCTGACC GACACAGAGCTGGCGCGACTGCTGAAAGCTCACTGCACAGCAGGGGCATCACTGGCGTCCGCCGCTGCGACGCTCAATCA AACGCGGAAGCGTTGTGAAGCCATAGCTCGTCGCTATCAGATCCCCTTCCGCTCTGCTGCTTTTAAAAAAGCGAGGGCGC GGTCATGA
Upstream 100 bases:
>100_bases GCCTTCATGAAAAAACTCACTGACACCTTTGTCGACCACGAGGTTGAAATCCTAGAGATCCAGTCGGGTGACAAGCTCGG CGGATTGGGAGGCCAGTGAC
Downstream 100 bases:
>100_bases GCAATACATCTACGTCTCTTCGAGGCAGGAAAAAGTCCCTGCAGGACTTGGCTGACTTCGCCATCTCACAGGGATGGGCA GTGCATCGCACTCATGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MQLYHTIEEDLPVQSDREKERLRSDIEKAMADYLSRGGAINQVEASQRSNDSSFIINPEKTAQLKADTSARGRKKTNDLT DTELARLLKAHCTAGASLASAAATLNQTRKRCEAIARRYQIPFRSAAFKKARARS
Sequences:
>Translated_135_residues MQLYHTIEEDLPVQSDREKERLRSDIEKAMADYLSRGGAINQVEASQRSNDSSFIINPEKTAQLKADTSARGRKKTNDLT DTELARLLKAHCTAGASLASAAATLNQTRKRCEAIARRYQIPFRSAAFKKARARS >Mature_135_residues MQLYHTIEEDLPVQSDREKERLRSDIEKAMADYLSRGGAINQVEASQRSNDSSFIINPEKTAQLKADTSARGRKKTNDLT DTELARLLKAHCTAGASLASAAATLNQTRKRCEAIARRYQIPFRSAAFKKARARS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15069; Mature: 15069
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLYHTIEEDLPVQSDREKERLRSDIEKAMADYLSRGGAINQVEASQRSNDSSFIINPEK CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEECCCC TAQLKADTSARGRKKTNDLTDTELARLLKAHCTAGASLASAAATLNQTRKRCEAIARRYQ HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC IPFRSAAFKKARARS CCHHHHHHHHHHCCC >Mature Secondary Structure MQLYHTIEEDLPVQSDREKERLRSDIEKAMADYLSRGGAINQVEASQRSNDSSFIINPEK CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEECCCC TAQLKADTSARGRKKTNDLTDTELARLLKAHCTAGASLASAAATLNQTRKRCEAIARRYQ HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC IPFRSAAFKKARARS CCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA