Click here to switch to the map view.

The map label for this gene is 66044769

Identifier: 66044769

GI number: 66044769

Start: 1712925

End: 1713389

Strand: Reverse

Name: 66044769

Synonym: Psyr_1522

Alternate gene names: NA

Gene position: 1713389-1712925 (Counterclockwise)

Preceding gene: 66044770

Following gene: 66044768

Centisome position: 28.12

GC content: 52.69

Gene sequence:

>465_bases
ATGGGCACATCAGTAGACTGGGAAGGTAACCTTGGCTCTGCTCCAGAATTTAAGGAGTTCGCCAACGGCAACAAAGATCC
GCGCCGCTTGCTACGGCTGAACGTTTACTTTGACAATTCAATTCCGAAAGCCGATGGATCAGGCTTTGAGGACAGAGGCG
GTTTCTGGGCCAACGTAGAATATTGGCACCGCGATGCGGAACACTATGCCAACCTGTTCCAAAAGGGCATGCGGGTCATG
ATCCAAGGGCGAGCGATCATTGATAACTGGACCAAGGACGGTAAGGAGTTTTCTGCGTTGAAAGTGCAGGCATCGCGGGT
CGCAATCCTTCCCCACCGGGTTGAAGCGGTGCAATTGGCCCCTTCCCAGTCATACAACCAGCCGCAAAGCGAGCAACAGC
ATACCGACCGGAATTCAACTCAAAATGATGCAGCTCCGCATTTCGACGACGATATTCCTGTGTAG

Upstream 100 bases:

>100_bases
GCCGAAAAGATGGCCCAGGCAGATGCCGTTTACTCAGGACGGCTGCAACAGATCTCACAATCCAGCGGCATTTCACCGCA
CACGCAGAAGGAGTCCTAAC

Downstream 100 bases:

>100_bases
GAAACCTGTGCGAAAAATCGCGCCCTCTGCGTGAAGCTGCTGGTGGAAACGACACTGATCAACGTTGTTCTCCATCAGCA
GGCAGGTACTTCTGCATTGT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MGTSVDWEGNLGSAPEFKEFANGNKDPRRLLRLNVYFDNSIPKADGSGFEDRGGFWANVEYWHRDAEHYANLFQKGMRVM
IQGRAIIDNWTKDGKEFSALKVQASRVAILPHRVEAVQLAPSQSYNQPQSEQQHTDRNSTQNDAAPHFDDDIPV

Sequences:

>Translated_154_residues
MGTSVDWEGNLGSAPEFKEFANGNKDPRRLLRLNVYFDNSIPKADGSGFEDRGGFWANVEYWHRDAEHYANLFQKGMRVM
IQGRAIIDNWTKDGKEFSALKVQASRVAILPHRVEAVQLAPSQSYNQPQSEQQHTDRNSTQNDAAPHFDDDIPV
>Mature_153_residues
GTSVDWEGNLGSAPEFKEFANGNKDPRRLLRLNVYFDNSIPKADGSGFEDRGGFWANVEYWHRDAEHYANLFQKGMRVMI
QGRAIIDNWTKDGKEFSALKVQASRVAILPHRVEAVQLAPSQSYNQPQSEQQHTDRNSTQNDAAPHFDDDIPV

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17477; Mature: 17346

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTSVDWEGNLGSAPEFKEFANGNKDPRRLLRLNVYFDNSIPKADGSGFEDRGGFWANVE
CCCCCCCCCCCCCCCCHHHHHCCCCCCHHEEEEEEEECCCCCCCCCCCCCCCCCEEECHH
YWHRDAEHYANLFQKGMRVMIQGRAIIDNWTKDGKEFSALKVQASRVAILPHRVEAVQLA
HHHCCHHHHHHHHHHHHHEECCCCCEECCCCCCCCHHHHEEEECCEEEECCCCCEEEEEC
PSQSYNQPQSEQQHTDRNSTQNDAAPHFDDDIPV
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GTSVDWEGNLGSAPEFKEFANGNKDPRRLLRLNVYFDNSIPKADGSGFEDRGGFWANVE
CCCCCCCCCCCCCCCHHHHHCCCCCCHHEEEEEEEECCCCCCCCCCCCCCCCCEEECHH
YWHRDAEHYANLFQKGMRVMIQGRAIIDNWTKDGKEFSALKVQASRVAILPHRVEAVQLA
HHHCCHHHHHHHHHHHHHEECCCCCEECCCCCCCCHHHHEEEECCEEEECCCCCEEEEEC
PSQSYNQPQSEQQHTDRNSTQNDAAPHFDDDIPV
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA