| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is pat [H]
Identifier: 66044747
GI number: 66044747
Start: 1688348
End: 1688902
Strand: Reverse
Name: pat [H]
Synonym: Psyr_1500
Alternate gene names: 66044747
Gene position: 1688902-1688348 (Counterclockwise)
Preceding gene: 66044748
Following gene: 66044746
Centisome position: 27.72
GC content: 58.92
Gene sequence:
>555_bases ATGAGCGTCAGCAGCATGGTCAGGAGCGCGTCCCCTACCGACGCCGCTGCCATCCAGGGTATCTATGCCCCAATGGTGGA GCGCACTGCAATTTCCTTTGAGCTGGAACCGCCGACCGTTGAAGAGATGGCGCATCGCATCGAATCAACCCTGTCCAAAT ACCCGTACCTGGTTGCGGAGCGCGAGGGTCAAGTGGTGGGCTATGCCTACGCCAGCCAGCACAGAACCAGAGAAGCTTAC CAATGGTCAGTGGACGTGACCGTGTATGTGGCTCCCCAAGCGCATCGTAGCGGCATCGCCCGCGTGCTGTACGCACGCCT GATTCCGATCCTGGAACGCCAGGGATTTCACACCGCTTATGCCGGTATCGCGCTCCCAAACGCGGGAAGCGTAGGGCTAC ATGAAGCGCTAGGTTTCGAGCACCTGGGCACCTATACCGAAGTCGGCTTCAAGCATGGCAAATGGCATGACGTCGGGTAC TGGCGCAAGCGCTTGAACAGTGCAACACCCCCAGGGCCAATTGTTCCGTTTAGCCAGCTTATCGAGGCAAGGTAG
Upstream 100 bases:
>100_bases TAAATCGCTACTCCGAGCGTAAGGAGAGCGCCGAAGCGCTTTCCCAGCGTGTGAATCAGCGGCCCAGTTAGGCGGGCTGT TAAACCACAAAGAGGTTGAA
Downstream 100 bases:
>100_bases GCTGGAAATCACTTCATTTTATAGAGTGGTCGCACATGAAATTTATAAGTCTTACTACCGCTGGACGGCGCGCGGTCGCA GCCATGGCACTGGCTGTCGC
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: PPT N-acetyltransferase; Phosphinothricin-resistance protein [H]
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSVSSMVRSASPTDAAAIQGIYAPMVERTAISFELEPPTVEEMAHRIESTLSKYPYLVAEREGQVVGYAYASQHRTREAY QWSVDVTVYVAPQAHRSGIARVLYARLIPILERQGFHTAYAGIALPNAGSVGLHEALGFEHLGTYTEVGFKHGKWHDVGY WRKRLNSATPPGPIVPFSQLIEAR
Sequences:
>Translated_184_residues MSVSSMVRSASPTDAAAIQGIYAPMVERTAISFELEPPTVEEMAHRIESTLSKYPYLVAEREGQVVGYAYASQHRTREAY QWSVDVTVYVAPQAHRSGIARVLYARLIPILERQGFHTAYAGIALPNAGSVGLHEALGFEHLGTYTEVGFKHGKWHDVGY WRKRLNSATPPGPIVPFSQLIEAR >Mature_183_residues SVSSMVRSASPTDAAAIQGIYAPMVERTAISFELEPPTVEEMAHRIESTLSKYPYLVAEREGQVVGYAYASQHRTREAYQ WSVDVTVYVAPQAHRSGIARVLYARLIPILERQGFHTAYAGIALPNAGSVGLHEALGFEHLGTYTEVGFKHGKWHDVGYW RKRLNSATPPGPIVPFSQLIEAR
Specific function: This enzyme is an effector of phosphinothricin tripeptide (PTT or bialaphos) resistance. Inactivates PTT by transfer of an acetyl group [H]
COG id: COG1247
COG function: function code M; Sortase and related acyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787719, Length=169, Percent_Identity=34.3195266272189, Blast_Score=91, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.183 [H]
Molecular weight: Translated: 20384; Mature: 20253
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSSMVRSASPTDAAAIQGIYAPMVERTAISFELEPPTVEEMAHRIESTLSKYPYLVAE CCHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCEEEEE REGQVVGYAYASQHRTREAYQWSVDVTVYVAPQAHRSGIARVLYARLIPILERQGFHTAY CCCCEEEEEHHHHHHHHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHH AGIALPNAGSVGLHEALGFEHLGTYTEVGFKHGKWHDVGYWRKRLNSATPPGPIVPFSQL HCEECCCCCCCCHHHHHCHHHHCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHH IEAR HCCC >Mature Secondary Structure SVSSMVRSASPTDAAAIQGIYAPMVERTAISFELEPPTVEEMAHRIESTLSKYPYLVAE CHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCEEEEE REGQVVGYAYASQHRTREAYQWSVDVTVYVAPQAHRSGIARVLYARLIPILERQGFHTAY CCCCEEEEEHHHHHHHHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHH AGIALPNAGSVGLHEALGFEHLGTYTEVGFKHGKWHDVGYWRKRLNSATPPGPIVPFSQL HCEECCCCCCCCHHHHHCHHHHCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHH IEAR HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3240868; 8593056 [H]