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The map label for this gene is ynfJ [C]

Identifier: 66044733

GI number: 66044733

Start: 1673655

End: 1675001

Strand: Reverse

Name: ynfJ [C]

Synonym: Psyr_1486

Alternate gene names: 66044733

Gene position: 1675001-1673655 (Counterclockwise)

Preceding gene: 66044734

Following gene: 66044732

Centisome position: 27.49

GC content: 56.12

Gene sequence:

>1347_bases
ATGTCTAAATTTCGACGACCTGAACAACTCGACTTACTGCCCTATATAGCGAAATGGCTTGCGCTTGCTGGTCTTGTAGC
TCTTTTGGCAGGCTCTGCTTCTGCGTTATTCCTGCTTTCTTTGGATCATGCCACCCAGTGGCGAGAAACCCATCCCTGGG
TAATCTGGCTCCTGCCAGTGGCCGGCTTTGCTGTGGGACTTGCATATCACTTGATAGGCAAACCCGTTGATGCCGGAAAC
AACCTGATCATCGATGAGATCCATGATCCTAAGAAGATCGTGCCTTTGCGCATGGTGCCGATGGTGCTGATCGGAACCGT
GGTTTCCCACCTTTTTGGTGCATCTGTGGGACGTGAGGGGACGGCGGTGCAAATGGGCGGTGCCCTTGCCGATCAACTGA
CGCATGTCTTCCGTCTGCGCCGCGAAGACCGTCGGGTGATTCTCATGGCCGGTATCAGTGCTGGCTTTGCGTCCGTCTTC
GGCACCCCTCTTGCCGGGGCTTTATTCGGACTTGAAGTATTGGCCATTGGACGTATGCGTTACGACGCGCTTTTCCCTTG
CGTGGTTGCGGCAATCGTTGCTGACCAGGTGGGGCAAGCCTGGGGCGTGGTTCACACGCATTACGTCATTGGCGAAGTGG
TTCCGGTGCAGCTGTGGAGCGTCATGGCTGTGGTGGCAGCTGGGATTGTCTTTGGCCTTACCGGCCTGCTATTCGCGACT
GCGACCCACAAGCTCGGAGCCTTCGTTAAGCGGCTTATCACCTATTCACCATTAAGACCCTTCGCCGGCGGCCTGCTGAT
CGCAGTCGCAGTGTGGGCGCTCGGTAGTAACCATTACATCGACGTTGATAAGTACATCGGGCTAGGCATTCCGAGCATCG
TCCAATCCTTTCAAATGCCAATGGCCCCTTGGGACTGGCTTGGAAAGATGGTGTTCACCGTTGTCTCCCTGGGGACTGGA
TTCAAGGGCGGCGAAGTCACACCGCTGTTTTACATCGGTGCCACCTTGGGGAATGCGCTGGCTCCCCTCTTGCACCTTCC
CTTCGGCATGCTGGCTGGTATCGGCTTTGTCGCCGTCTTTGCCGGTGCAGCTAATACGCCACTGGCAACCATCGTTATGG
CCATGGAGCTCTTCGGGCCCGAAATTGCTCCGCTTGCAGCCATTGCCTGTATCGCAAGTTACCTCGTATCCGGACACACC
GGGATCTATCACGCCCAGCGCGTCGGCCACAGCAAGCATCACCGTCCTCTTCCGGAGGAAATCCGGCTCTCTGATATCAA
GCAATTTCATGCTCAAAGTGAATCCGCCAGCGAGCGGAAAGTGACTCTTGCGGGGGAAGAGAAATGA

Upstream 100 bases:

>100_bases
CTGATGATGCCTACAGAAACCTGATCAAACCAGGTCTGTAGGCGTTCGCGCTTAGAATCCCTTCTTTGGTCAGGCCCACT
TATTTTTTGTGGCTGGCCAA

Downstream 100 bases:

>100_bases
TTGAACATCACCAAGATCGCCTGACAGCTTTGCAACTCTATTTTCCTGGCGCTAGCCGGGCTCGCGTGACCAGCTTCTGG
CACCACCTAAGCGCACCTGC

Product: Cl- channel, voltage gated

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MSKFRRPEQLDLLPYIAKWLALAGLVALLAGSASALFLLSLDHATQWRETHPWVIWLLPVAGFAVGLAYHLIGKPVDAGN
NLIIDEIHDPKKIVPLRMVPMVLIGTVVSHLFGASVGREGTAVQMGGALADQLTHVFRLRREDRRVILMAGISAGFASVF
GTPLAGALFGLEVLAIGRMRYDALFPCVVAAIVADQVGQAWGVVHTHYVIGEVVPVQLWSVMAVVAAGIVFGLTGLLFAT
ATHKLGAFVKRLITYSPLRPFAGGLLIAVAVWALGSNHYIDVDKYIGLGIPSIVQSFQMPMAPWDWLGKMVFTVVSLGTG
FKGGEVTPLFYIGATLGNALAPLLHLPFGMLAGIGFVAVFAGAANTPLATIVMAMELFGPEIAPLAAIACIASYLVSGHT
GIYHAQRVGHSKHHRPLPEEIRLSDIKQFHAQSESASERKVTLAGEEK

Sequences:

>Translated_448_residues
MSKFRRPEQLDLLPYIAKWLALAGLVALLAGSASALFLLSLDHATQWRETHPWVIWLLPVAGFAVGLAYHLIGKPVDAGN
NLIIDEIHDPKKIVPLRMVPMVLIGTVVSHLFGASVGREGTAVQMGGALADQLTHVFRLRREDRRVILMAGISAGFASVF
GTPLAGALFGLEVLAIGRMRYDALFPCVVAAIVADQVGQAWGVVHTHYVIGEVVPVQLWSVMAVVAAGIVFGLTGLLFAT
ATHKLGAFVKRLITYSPLRPFAGGLLIAVAVWALGSNHYIDVDKYIGLGIPSIVQSFQMPMAPWDWLGKMVFTVVSLGTG
FKGGEVTPLFYIGATLGNALAPLLHLPFGMLAGIGFVAVFAGAANTPLATIVMAMELFGPEIAPLAAIACIASYLVSGHT
GIYHAQRVGHSKHHRPLPEEIRLSDIKQFHAQSESASERKVTLAGEEK
>Mature_447_residues
SKFRRPEQLDLLPYIAKWLALAGLVALLAGSASALFLLSLDHATQWRETHPWVIWLLPVAGFAVGLAYHLIGKPVDAGNN
LIIDEIHDPKKIVPLRMVPMVLIGTVVSHLFGASVGREGTAVQMGGALADQLTHVFRLRREDRRVILMAGISAGFASVFG
TPLAGALFGLEVLAIGRMRYDALFPCVVAAIVADQVGQAWGVVHTHYVIGEVVPVQLWSVMAVVAAGIVFGLTGLLFATA
THKLGAFVKRLITYSPLRPFAGGLLIAVAVWALGSNHYIDVDKYIGLGIPSIVQSFQMPMAPWDWLGKMVFTVVSLGTGF
KGGEVTPLFYIGATLGNALAPLLHLPFGMLAGIGFVAVFAGAANTPLATIVMAMELFGPEIAPLAAIACIASYLVSGHTG
IYHAQRVGHSKHHRPLPEEIRLSDIKQFHAQSESASERKVTLAGEEK

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 47919; Mature: 47788

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFRRPEQLDLLPYIAKWLALAGLVALLAGSASALFLLSLDHATQWRETHPWVIWLLPV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCCCCEEEEHHHH
AGFAVGLAYHLIGKPVDAGNNLIIDEIHDPKKIVPLRMVPMVLIGTVVSHLFGASVGREG
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TAVQMGGALADQLTHVFRLRREDRRVILMAGISAGFASVFGTPLAGALFGLEVLAIGRMR
CEEEECHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YDALFPCVVAAIVADQVGQAWGVVHTHYVIGEVVPVQLWSVMAVVAAGIVFGLTGLLFAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATHKLGAFVKRLITYSPLRPFAGGLLIAVAVWALGSNHYIDVDKYIGLGIPSIVQSFQMP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHCCC
MAPWDWLGKMVFTVVSLGTGFKGGEVTPLFYIGATLGNALAPLLHLPFGMLAGIGFVAVF
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAANTPLATIVMAMELFGPEIAPLAAIACIASYLVSGHTGIYHAQRVGHSKHHRPLPEE
HCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHH
IRLSDIKQFHAQSESASERKVTLAGEEK
HHHHHHHHHHHCCCCCCCCEEEECCCCC
>Mature Secondary Structure 
SKFRRPEQLDLLPYIAKWLALAGLVALLAGSASALFLLSLDHATQWRETHPWVIWLLPV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCCCCEEEEHHHH
AGFAVGLAYHLIGKPVDAGNNLIIDEIHDPKKIVPLRMVPMVLIGTVVSHLFGASVGREG
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TAVQMGGALADQLTHVFRLRREDRRVILMAGISAGFASVFGTPLAGALFGLEVLAIGRMR
CEEEECHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YDALFPCVVAAIVADQVGQAWGVVHTHYVIGEVVPVQLWSVMAVVAAGIVFGLTGLLFAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATHKLGAFVKRLITYSPLRPFAGGLLIAVAVWALGSNHYIDVDKYIGLGIPSIVQSFQMP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHCCC
MAPWDWLGKMVFTVVSLGTGFKGGEVTPLFYIGATLGNALAPLLHLPFGMLAGIGFVAVF
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAANTPLATIVMAMELFGPEIAPLAAIACIASYLVSGHTGIYHAQRVGHSKHHRPLPEE
HCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHH
IRLSDIKQFHAQSESASERKVTLAGEEK
HHHHHHHHHHHCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]