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The map label for this gene is 66044710

Identifier: 66044710

GI number: 66044710

Start: 1649828

End: 1652086

Strand: Reverse

Name: 66044710

Synonym: Psyr_1463

Alternate gene names: NA

Gene position: 1652086-1649828 (Counterclockwise)

Preceding gene: 66044711

Following gene: 66044705

Centisome position: 27.11

GC content: 57.37

Gene sequence:

>2259_bases
ATGAACGACCTGCCTTTGGCTGCGCCTGCAGACCACCCTTGTGTACCAACTTTGAACATCGGGCTCACTGAGTTTATCGA
AGAGTTTGGCGACGAACTCCTGGAGTCACTCAACCGCTCCAACCCACCGGTCTACGCCGGCATCGACAATCCGGCTCGGC
AGTGGGTGCTGGACGGCCTCAAAAGACAGCCCTTCCCTGCCCAAGCTCAAGTGGTCCAGGCAATTGCCGCGCTTTTGCTC
GATCAGAATGAGCAGGCTGGCATCATCAATGCCGAGATGGGGACAGGCAAAACAATGATGGCCATCGCTCTCGCTGCAGT
CATGCATGGATCTGGTTATCGCAGGACGATGGTCATCGCGCCTCCGCACCTGGTCTACAAGTGGCGGCGCGAGATCCTCG
AAACCATCCCTGACGCTCGCGTCTGGGTGCTCAACGGACCGGATACCCTGGTCAAGCTGCTGAAGCTGCGCGATCAACTG
GGTGATACCTACGACGGACGTCAGGAGTTCTTTATTCTCGGCCGTGTGCGGATGCGGATGGGGTTCCACTGGCGTCTGGC
CTTTTGGCAACGACGTGCCGGCGGTGGTAGGAGCCTGGCAGCGTGTCCAGATTGTGGACGTCTGCTCCAGGACCAGGAAG
GCAATCTGATCACTGCTGAGGAATTTCAGCGTGAAGAGCGACGTCGACGCTGCGACCACTGTGATGCCGCTTTATGGACG
CTGATGCGTCCGGGCAAATCGGATGGCGGCAGCCGCCGTAACACGATCCTAAAGTCGATGTGTCGCATCCCTACAATCGG
ACCTGTTCGTGCAGAACGGCTTTTATCTGACTTCGGCGAAGACTTTCTCGCCTCGATGCTTCTGGACAATGTCTCTGAGT
TCATCAACCTGATGGACGCCAAAGGCAATTTCATCTTCAGCGACCGCCAAGCCAAGCGCATGGAGCGTGCGATGGCCAAC
ATCGAGTTCGGGTTCGGCGAGGGGGGTTACCAACCCACCGAGTTCATCAAGCGCTACCTGCCTGATGGGTGCTTCGACCT
ACTGGTCGTGGACGAGGGGCATGAGTACAAAAACAGTGGATCGGCACAAGGTCAGGCTATGGGCGTGCTCGCAGCCAAAG
CACGAAAGACTGTGCTGCTGACCGGCACTCTCATGGGCGGCTATGCGGACGATCTGTTCTACCTACTGTTCCGGATCCTC
ACCAGACGTATGATCGAGGACGGCTATCAGCCCAACGCGCGAGGAAGCATGGCGCCGGCGGCGATGTCTTTTATGCGGGA
TCATGGGGTATTGAAGGATATCTACACCGAGCGTGATGGCAGTTCTCACAAGACTGCCAAAGGCAAGAAACTCTCAGTGC
GGACGGTCAAAGCTCCGGGGTTCGGCCCGAAAGGCATTCACCGCTTCGTTCTACCCTTCACTGTGTTCCTGAAACTCAAG
GATATCGGCGGCAACGTGCTACCTGGTTACCGGGAGGAGTTCATTGACGTACCGATGTCTCCAGACCAGGAGGCGGCTCA
CCGAAAGCTTGCCCAGACATTGACCGTCGAGCTTCGGCAGGCGCTGGCCCGAAGAGATACGACGCTGTTAGGGGTGGTGT
TGAACGTGCTGTTGGCATGGCCGGACTGCTGCTTTCGACCTGAGGTGGTAAAACATCCTCGATCCAGAGACACGTTGGCT
TTCGTGCCGTCGGTCTTCGATGACGACGAGCTCATGCCGAAGGAACAGGCCCTTCTGGACCTATGTCTTGCTGAAAAAGC
CCGGAACCGCAAGGTTCTGGCCTACTCGGTTTACACGGGTACCAGAGACACCACGAGCCGCATGAAGCGGGTGCTCGAGC
AATCGGGGCTGAAGGTGGCAGTGCTGCGTGCATCAGTGGACACCGCCAGGCGCGAGGACTGGATCCTCGACCAGGTTGAT
CGAGGTGTCGACGTACTGATCACCAACCCGGAGCTCGTAAAAACAGGTCTGGATCTGCTCGACTTTCCGACCATTGCCTT
CATGCAGACTGGTTACAACGTCTACACGGTGCAACAGGCGGCAAGGCGCTCATGGAGGATCGGACAGAAGCAGGACGTCC
GAGTGATCTTTTTCGGCTACATCGGCAGCTCTCAGATCACCTGCCTGCAGCTGATGGCCAAGAAGATCGCCGTATCGCAG
AGCACTTCAGGGGATGTTCCAGAGTCTGGATTGGATTCACTGAACCAGGATGGCGATTCCGTAGAGATGGCACTCGCCAG
ACAACTCATCAACGCTTGA

Upstream 100 bases:

>100_bases
TTACCAAGACCTTTTAATCATCTAACCGCACCTCAGGGTATGAACAATACCCTTGGTGGTGTCGTGCATGCCCTGTTTAA
CCCAATAGTGGAGAAACATC

Downstream 100 bases:

>100_bases
ACATGGCCACCTTCGGGTGGCCTTTTCACACCGCGCTGTGCAAGGTACCGCATCGACGACCTGATGTGCTTTTTGAACGC
ACTACCTCCTACATTTTTTG

Product: DEAD/DEAH box helicase

Products: NA

Alternate protein names: Helicase Domain-Containing Protein; Plasmid-Related Protein; Helicase Domain Protein; Superfamily Protein DNA/RNA Helicase; Helicase Conserved C-Terminal Domain Protein; Dead/Deah Box Helicase; DEAD/DEAH Box Helicase; Helicase Conserved C- Domain Protein; DNA poisomerase III

Number of amino acids: Translated: 752; Mature: 752

Protein sequence:

>752_residues
MNDLPLAAPADHPCVPTLNIGLTEFIEEFGDELLESLNRSNPPVYAGIDNPARQWVLDGLKRQPFPAQAQVVQAIAALLL
DQNEQAGIINAEMGTGKTMMAIALAAVMHGSGYRRTMVIAPPHLVYKWRREILETIPDARVWVLNGPDTLVKLLKLRDQL
GDTYDGRQEFFILGRVRMRMGFHWRLAFWQRRAGGGRSLAACPDCGRLLQDQEGNLITAEEFQREERRRRCDHCDAALWT
LMRPGKSDGGSRRNTILKSMCRIPTIGPVRAERLLSDFGEDFLASMLLDNVSEFINLMDAKGNFIFSDRQAKRMERAMAN
IEFGFGEGGYQPTEFIKRYLPDGCFDLLVVDEGHEYKNSGSAQGQAMGVLAAKARKTVLLTGTLMGGYADDLFYLLFRIL
TRRMIEDGYQPNARGSMAPAAMSFMRDHGVLKDIYTERDGSSHKTAKGKKLSVRTVKAPGFGPKGIHRFVLPFTVFLKLK
DIGGNVLPGYREEFIDVPMSPDQEAAHRKLAQTLTVELRQALARRDTTLLGVVLNVLLAWPDCCFRPEVVKHPRSRDTLA
FVPSVFDDDELMPKEQALLDLCLAEKARNRKVLAYSVYTGTRDTTSRMKRVLEQSGLKVAVLRASVDTARREDWILDQVD
RGVDVLITNPELVKTGLDLLDFPTIAFMQTGYNVYTVQQAARRSWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQ
STSGDVPESGLDSLNQDGDSVEMALARQLINA

Sequences:

>Translated_752_residues
MNDLPLAAPADHPCVPTLNIGLTEFIEEFGDELLESLNRSNPPVYAGIDNPARQWVLDGLKRQPFPAQAQVVQAIAALLL
DQNEQAGIINAEMGTGKTMMAIALAAVMHGSGYRRTMVIAPPHLVYKWRREILETIPDARVWVLNGPDTLVKLLKLRDQL
GDTYDGRQEFFILGRVRMRMGFHWRLAFWQRRAGGGRSLAACPDCGRLLQDQEGNLITAEEFQREERRRRCDHCDAALWT
LMRPGKSDGGSRRNTILKSMCRIPTIGPVRAERLLSDFGEDFLASMLLDNVSEFINLMDAKGNFIFSDRQAKRMERAMAN
IEFGFGEGGYQPTEFIKRYLPDGCFDLLVVDEGHEYKNSGSAQGQAMGVLAAKARKTVLLTGTLMGGYADDLFYLLFRIL
TRRMIEDGYQPNARGSMAPAAMSFMRDHGVLKDIYTERDGSSHKTAKGKKLSVRTVKAPGFGPKGIHRFVLPFTVFLKLK
DIGGNVLPGYREEFIDVPMSPDQEAAHRKLAQTLTVELRQALARRDTTLLGVVLNVLLAWPDCCFRPEVVKHPRSRDTLA
FVPSVFDDDELMPKEQALLDLCLAEKARNRKVLAYSVYTGTRDTTSRMKRVLEQSGLKVAVLRASVDTARREDWILDQVD
RGVDVLITNPELVKTGLDLLDFPTIAFMQTGYNVYTVQQAARRSWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQ
STSGDVPESGLDSLNQDGDSVEMALARQLINA
>Mature_752_residues
MNDLPLAAPADHPCVPTLNIGLTEFIEEFGDELLESLNRSNPPVYAGIDNPARQWVLDGLKRQPFPAQAQVVQAIAALLL
DQNEQAGIINAEMGTGKTMMAIALAAVMHGSGYRRTMVIAPPHLVYKWRREILETIPDARVWVLNGPDTLVKLLKLRDQL
GDTYDGRQEFFILGRVRMRMGFHWRLAFWQRRAGGGRSLAACPDCGRLLQDQEGNLITAEEFQREERRRRCDHCDAALWT
LMRPGKSDGGSRRNTILKSMCRIPTIGPVRAERLLSDFGEDFLASMLLDNVSEFINLMDAKGNFIFSDRQAKRMERAMAN
IEFGFGEGGYQPTEFIKRYLPDGCFDLLVVDEGHEYKNSGSAQGQAMGVLAAKARKTVLLTGTLMGGYADDLFYLLFRIL
TRRMIEDGYQPNARGSMAPAAMSFMRDHGVLKDIYTERDGSSHKTAKGKKLSVRTVKAPGFGPKGIHRFVLPFTVFLKLK
DIGGNVLPGYREEFIDVPMSPDQEAAHRKLAQTLTVELRQALARRDTTLLGVVLNVLLAWPDCCFRPEVVKHPRSRDTLA
FVPSVFDDDELMPKEQALLDLCLAEKARNRKVLAYSVYTGTRDTTSRMKRVLEQSGLKVAVLRASVDTARREDWILDQVD
RGVDVLITNPELVKTGLDLLDFPTIAFMQTGYNVYTVQQAARRSWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQ
STSGDVPESGLDSLNQDGDSVEMALARQLINA

Specific function: Unknown

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84129; Mature: 84129

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLPLAAPADHPCVPTLNIGLTEFIEEFGDELLESLNRSNPPVYAGIDNPARQWVLDGL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHH
KRQPFPAQAQVVQAIAALLLDQNEQAGIINAEMGTGKTMMAIALAAVMHGSGYRRTMVIA
CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEC
PPHLVYKWRREILETIPDARVWVLNGPDTLVKLLKLRDQLGDTYDGRQEFFILGRVRMRM
CHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHEEEEEHHHHHH
GFHWRLAFWQRRAGGGRSLAACPDCGRLLQDQEGNLITAEEFQREERRRRCDHCDAALWT
CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHH
LMRPGKSDGGSRRNTILKSMCRIPTIGPVRAERLLSDFGEDFLASMLLDNVSEFINLMDA
HHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KGNFIFSDRQAKRMERAMANIEFGFGEGGYQPTEFIKRYLPDGCFDLLVVDEGHEYKNSG
CCCEEECCHHHHHHHHHHHHCEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCC
SAQGQAMGVLAAKARKTVLLTGTLMGGYADDLFYLLFRILTRRMIEDGYQPNARGSMAPA
CCCCHHHHHHHHHCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
AMSFMRDHGVLKDIYTERDGSSHKTAKGKKLSVRTVKAPGFGPKGIHRFVLPFTVFLKLK
HHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
DIGGNVLPGYREEFIDVPMSPDQEAAHRKLAQTLTVELRQALARRDTTLLGVVLNVLLAW
CCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
PDCCFRPEVVKHPRSRDTLAFVPSVFDDDELMPKEQALLDLCLAEKARNRKVLAYSVYTG
CCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECC
TRDTTSRMKRVLEQSGLKVAVLRASVDTARREDWILDQVDRGVDVLITNPELVKTGLDLL
CCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCHHH
DFPTIAFMQTGYNVYTVQQAARRSWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQ
HCCHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC
STSGDVPESGLDSLNQDGDSVEMALARQLINA
CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNDLPLAAPADHPCVPTLNIGLTEFIEEFGDELLESLNRSNPPVYAGIDNPARQWVLDGL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHH
KRQPFPAQAQVVQAIAALLLDQNEQAGIINAEMGTGKTMMAIALAAVMHGSGYRRTMVIA
CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEC
PPHLVYKWRREILETIPDARVWVLNGPDTLVKLLKLRDQLGDTYDGRQEFFILGRVRMRM
CHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHEEEEEHHHHHH
GFHWRLAFWQRRAGGGRSLAACPDCGRLLQDQEGNLITAEEFQREERRRRCDHCDAALWT
CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHH
LMRPGKSDGGSRRNTILKSMCRIPTIGPVRAERLLSDFGEDFLASMLLDNVSEFINLMDA
HHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KGNFIFSDRQAKRMERAMANIEFGFGEGGYQPTEFIKRYLPDGCFDLLVVDEGHEYKNSG
CCCEEECCHHHHHHHHHHHHCEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCC
SAQGQAMGVLAAKARKTVLLTGTLMGGYADDLFYLLFRILTRRMIEDGYQPNARGSMAPA
CCCCHHHHHHHHHCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
AMSFMRDHGVLKDIYTERDGSSHKTAKGKKLSVRTVKAPGFGPKGIHRFVLPFTVFLKLK
HHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
DIGGNVLPGYREEFIDVPMSPDQEAAHRKLAQTLTVELRQALARRDTTLLGVVLNVLLAW
CCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
PDCCFRPEVVKHPRSRDTLAFVPSVFDDDELMPKEQALLDLCLAEKARNRKVLAYSVYTG
CCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECC
TRDTTSRMKRVLEQSGLKVAVLRASVDTARREDWILDQVDRGVDVLITNPELVKTGLDLL
CCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCHHH
DFPTIAFMQTGYNVYTVQQAARRSWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQ
HCCHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC
STSGDVPESGLDSLNQDGDSVEMALARQLINA
CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA