| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044704
Identifier: 66044704
GI number: 66044704
Start: 1644169
End: 1644915
Strand: Reverse
Name: 66044704
Synonym: Psyr_1457
Alternate gene names: NA
Gene position: 1644915-1644169 (Counterclockwise)
Preceding gene: 66044705
Following gene: 66044703
Centisome position: 26.99
GC content: 57.7
Gene sequence:
>747_bases ATGACCGTTTACAACCTGCGAATGTTCACAATGACGGGAGTCATCCTGATCACAGCAGCTGGCATGGCCAACGCTGCAAC CAACACCTCCGCACAGTCCACCAGTAGAGAGCACCAGAGCGCTTTGCTGGACAGCCAGTCGCAATCGAGCGACGAGATGC TGGCACGAGACTGGAACCTGAGTCCTCAGGAATGGCAGCGCTATCAAACGCTGATGCAGAGTTCACGAGGTGTGTATTCC CCCGGGCTGGATCCGCTGACTGCATTGGGTATCGAAGCCCGCAATGATGAAGAGCGCCGGCGGTATGCAGAGCTCCAGGT CAAAGCCGAGGCGCAGCGCACGGCAAAAGAATTGGCGTATCAACGCGCATATGACGATGCCTTTAAACGCCTCTATCCCA ATCTGATGCCCATCGCCAGTTCGGCGCCCCAAGGGGCGACCGCAAGCCCTGCTAACCAGGGCAATGGCCGATTGGCAGTG TTCGTCAAGGACGATTGCCCGGAGTGCTCAGTTCGGGTTAAGGCCCTTCAAGCTCAGAAGCAGCCGTTTGACGTGTACAT GGTGGGTAGCCAGAACGACGATGAGCGAATTCGCAACTGGGCGATTGTCTCGGGGATCGACCCTGCGAATGTCAGAACCC GACAAATCACCCTCAACCATGACGGTGGACGTTGGCTTGGCCTGAGCTTGGGTGGCGAGTTACCGGCCGTTGTGCGAGAG GTGAATGGGCAATGGCTGCGTCAGTGA
Upstream 100 bases:
>100_bases CGGGGAGCAACTGGCAGCTCAACAGCCTGGATGATTCGCGCGCCCTGTTCAGCATCAACGGCTCAACCCGCATTCTGCCC CTGCGCCCTTAGAGGTTCAC
Downstream 100 bases:
>100_bases CGTGGGCAGGCCTTGCCCTGCTGTGCTTCGTGTTGACAAGCCATGCAGCCGAGCTTCCCCCGCCGGCTTATCAGTTGGCT GCCCGCGCAGCGAACATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTVYNLRMFTMTGVILITAAGMANAATNTSAQSTSREHQSALLDSQSQSSDEMLARDWNLSPQEWQRYQTLMQSSRGVYS PGLDPLTALGIEARNDEERRRYAELQVKAEAQRTAKELAYQRAYDDAFKRLYPNLMPIASSAPQGATASPANQGNGRLAV FVKDDCPECSVRVKALQAQKQPFDVYMVGSQNDDERIRNWAIVSGIDPANVRTRQITLNHDGGRWLGLSLGGELPAVVRE VNGQWLRQ
Sequences:
>Translated_248_residues MTVYNLRMFTMTGVILITAAGMANAATNTSAQSTSREHQSALLDSQSQSSDEMLARDWNLSPQEWQRYQTLMQSSRGVYS PGLDPLTALGIEARNDEERRRYAELQVKAEAQRTAKELAYQRAYDDAFKRLYPNLMPIASSAPQGATASPANQGNGRLAV FVKDDCPECSVRVKALQAQKQPFDVYMVGSQNDDERIRNWAIVSGIDPANVRTRQITLNHDGGRWLGLSLGGELPAVVRE VNGQWLRQ >Mature_247_residues TVYNLRMFTMTGVILITAAGMANAATNTSAQSTSREHQSALLDSQSQSSDEMLARDWNLSPQEWQRYQTLMQSSRGVYSP GLDPLTALGIEARNDEERRRYAELQVKAEAQRTAKELAYQRAYDDAFKRLYPNLMPIASSAPQGATASPANQGNGRLAVF VKDDCPECSVRVKALQAQKQPFDVYMVGSQNDDERIRNWAIVSGIDPANVRTRQITLNHDGGRWLGLSLGGELPAVVREV NGQWLRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27580; Mature: 27449
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVYNLRMFTMTGVILITAAGMANAATNTSAQSTSREHQSALLDSQSQSSDEMLARDWNL CEEEEEEHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCC SPQEWQRYQTLMQSSRGVYSPGLDPLTALGIEARNDEERRRYAELQVKAEAQRTAKELAY CHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QRAYDDAFKRLYPNLMPIASSAPQGATASPANQGNGRLAVFVKDDCPECSVRVKALQAQK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCC QPFDVYMVGSQNDDERIRNWAIVSGIDPANVRTRQITLNHDGGRWLGLSLGGELPAVVRE CCCEEEEECCCCCHHHHHCEEEEECCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHH VNGQWLRQ HCHHHHCC >Mature Secondary Structure TVYNLRMFTMTGVILITAAGMANAATNTSAQSTSREHQSALLDSQSQSSDEMLARDWNL EEEEEEHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCC SPQEWQRYQTLMQSSRGVYSPGLDPLTALGIEARNDEERRRYAELQVKAEAQRTAKELAY CHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QRAYDDAFKRLYPNLMPIASSAPQGATASPANQGNGRLAVFVKDDCPECSVRVKALQAQK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCC QPFDVYMVGSQNDDERIRNWAIVSGIDPANVRTRQITLNHDGGRWLGLSLGGELPAVVRE CCCEEEEECCCCCHHHHHCEEEEECCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHH VNGQWLRQ HCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA