| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044701
Identifier: 66044701
GI number: 66044701
Start: 1640953
End: 1643112
Strand: Reverse
Name: 66044701
Synonym: Psyr_1454
Alternate gene names: NA
Gene position: 1643112-1640953 (Counterclockwise)
Preceding gene: 66044702
Following gene: 66044700
Centisome position: 26.96
GC content: 57.22
Gene sequence:
>2160_bases ATGGCTCACGATTACGCCATTGAATCACTTCTCAGACCCGCTGTAGAGCTGTACACCGTGTACGTGTGCGCTGCAGGTGC ATTCCTGTGCGTGTTCGCTCCCTGGGCGTTTGCGCTTACTCCGCTGTTCGGCATCGTGACCTCCGCGGGCTTTCTCGCTT TGGGCTTAGTGCGTCTGAAACAAGCTTGGCAGGTGCTGCGCTATCGTCGAAACATCCGTCGACTGCCTCATTACACGATG ACCAGTAAAGAAGTGCCGGTGAGCAATCAACGTCTCTTCATCGGTCTTGGCTTCCGTTGGCAGCAGCGCCATACCCAGCG GCTGATGGACACTTACCTGCCGAAGTACGCCAGCTACGTTGAGGCCACCTCACTGTTCCGCGCAGCGCGTCGCTTTGAGG AGAGAGCTGAGTTCGCTCCATACCCTGTCCGGCTTCTGGCCAGAGCAACATCATGGGACGTGCCCATCAATCCTGTGCGA CCTCTGCCACCCGTAGGCGGCTTGCCAAGGCTGCACGGCATCGAGCCATACGAGGAGAACGTCTCTCTCCCGTTGGGCGA GCGAGTAGGCCATTCGATTGTTCTGGGCACCACCCGTGTCGGAAAAACGCGCCTGGCTGAATTGTTCATCACTCAGGACA TTCGGCGGAAAAAGCACGGCAAGCACGAGGTCGTCATCGTCTTTGATCCAAAGGGCGATGCAGATTTGCTCAAGCGCATG TATCTCGAAGCCAAACGCGCCGGCCGCCTGAACGAATTTTATGTGTTCCACCTGGGCTGGCCAGATCACTCGGCACGCTA CAACGCCGTTGGGCGTTTTGGGCGGATTTCAGAGGTGGCCACCAGGATCGCTGGGCAACTCTCCGGGGAAGGTAACTCAG CAGCATTCCGTGAATTCGCTTGGCGATTCGTGAACATCATCGCAAGAGCCCTCGTCGCGCTGGGCCGTCGACCTGACTAC CTGCAGATCCAGCAGCACGTGATCAACATCGAAGGGATCTTCCAAGAGTATGCCTCTAAATACTTTGATGAATATGATCC AAAGGCCTGGGAGGCGATCGTCGCTATTGAGGGCAAGCTCAACGAAAAAAACGTACCGTTCAACATGAAGGGCCGGCCGT TCCGTGTGGTGGCCATCGATCAATACCTGTCTCAGACGCGCGTGGCAGATCCAGTGATGGATGGACTGCGCAGCGCGGTC CGCTACGACAAGACCTATTTCGACAAGATCGTCGCCTCGCTGCTGCCACTGCTTGAGAAGCTGACAACAGGCCGCATGGC GGAACTGATCTCGCCGGACTATCAGGACGTGAATGATCCTCGACCGATCTTTGACTGGATGCAGGTGGTCCGCAAAAAGG CGGTGGTCTATATCGGCCTGGACGCCTTGTCGGACACGGAGGTCGCGGCTGCCGTCGGCAACTCGATGTTCTCCGACCTG GTATCGGTCGCTGGCCATATCTACAAGTTCGGTGTCGACGACGGACTACCGGGCGGCGTCCCTGGCACCAAAGTGCCTAT CAACCTCCATGCCGATGAGTTCAACGAGCTGATGGGTGAGGAATTCATTCCGATGATCAACAAGGGTGGCGGTGCCGGCA TGCAGGTGACTGCCTACACCCAGACAATGAGCGATATCGAAGCGAAGATCGGCAACAAGGCCAAGGCTGGCCAGGTGATC GGTAACTTCAACAACGTGTTCATGCTGCGCGTCCGCGAAACGTCCACCGCCGAGCTGCTGACAAACCAGTTGCCTAAGGT TCAGGTTTTCACATCCACCCCGGCCAGCTCGGCGAATGACAGTGCAACGGGCAATACCGCGTTCACATCATCCAGTCATG ACCAGGTGCAGCAGGTCAGCGTGCCAATGATTGAGCCAGCGCATGTCGTCGGCCTGCCCAAGGGCCAATGCTTCGCGCTC ATGGAAGGCGGCAATCTGTGGAAAATCAGAATGCCTTTGCCTGGCCATGATCCTGATGAAGTAATGCCGGCAGATCTGCA GGCCTTGGCGGAAAGCATGCGTCAGACGTATCAGGTGGGCAAGGTCGACGACACTGGCTGGTGGTCAGCGCCCGGTTATC AGACGCTAAACGAGTCGCTGCCTGCAGATCTGCTCGACGACTTCAAAAAAATCGCTGTTGCACCTGAGGATGCGGCATGA
Upstream 100 bases:
>100_bases TGTCCCCCGCATCAGGTGACGAGCTTTCTCAACGACTCGGCCTGAATCACTATCCGGTGTTGATCACCCCAACCGCCATC GAGCAATAGGAGGTCGGGTT
Downstream 100 bases:
>100_bases CTCTCGGCGGGTTGAGCGATCGGCAAGGGGGCATCTGATATGGCTGACGTTGCCGATCGCGCGAAACAGCAACAAGACCA CGAACAGTCGTTCATAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 719; Mature: 718
Protein sequence:
>719_residues MAHDYAIESLLRPAVELYTVYVCAAGAFLCVFAPWAFALTPLFGIVTSAGFLALGLVRLKQAWQVLRYRRNIRRLPHYTM TSKEVPVSNQRLFIGLGFRWQQRHTQRLMDTYLPKYASYVEATSLFRAARRFEERAEFAPYPVRLLARATSWDVPINPVR PLPPVGGLPRLHGIEPYEENVSLPLGERVGHSIVLGTTRVGKTRLAELFITQDIRRKKHGKHEVVIVFDPKGDADLLKRM YLEAKRAGRLNEFYVFHLGWPDHSARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFAWRFVNIIARALVALGRRPDY LQIQQHVINIEGIFQEYASKYFDEYDPKAWEAIVAIEGKLNEKNVPFNMKGRPFRVVAIDQYLSQTRVADPVMDGLRSAV RYDKTYFDKIVASLLPLLEKLTTGRMAELISPDYQDVNDPRPIFDWMQVVRKKAVVYIGLDALSDTEVAAAVGNSMFSDL VSVAGHIYKFGVDDGLPGGVPGTKVPINLHADEFNELMGEEFIPMINKGGGAGMQVTAYTQTMSDIEAKIGNKAKAGQVI GNFNNVFMLRVRETSTAELLTNQLPKVQVFTSTPASSANDSATGNTAFTSSSHDQVQQVSVPMIEPAHVVGLPKGQCFAL MEGGNLWKIRMPLPGHDPDEVMPADLQALAESMRQTYQVGKVDDTGWWSAPGYQTLNESLPADLLDDFKKIAVAPEDAA
Sequences:
>Translated_719_residues MAHDYAIESLLRPAVELYTVYVCAAGAFLCVFAPWAFALTPLFGIVTSAGFLALGLVRLKQAWQVLRYRRNIRRLPHYTM TSKEVPVSNQRLFIGLGFRWQQRHTQRLMDTYLPKYASYVEATSLFRAARRFEERAEFAPYPVRLLARATSWDVPINPVR PLPPVGGLPRLHGIEPYEENVSLPLGERVGHSIVLGTTRVGKTRLAELFITQDIRRKKHGKHEVVIVFDPKGDADLLKRM YLEAKRAGRLNEFYVFHLGWPDHSARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFAWRFVNIIARALVALGRRPDY LQIQQHVINIEGIFQEYASKYFDEYDPKAWEAIVAIEGKLNEKNVPFNMKGRPFRVVAIDQYLSQTRVADPVMDGLRSAV RYDKTYFDKIVASLLPLLEKLTTGRMAELISPDYQDVNDPRPIFDWMQVVRKKAVVYIGLDALSDTEVAAAVGNSMFSDL VSVAGHIYKFGVDDGLPGGVPGTKVPINLHADEFNELMGEEFIPMINKGGGAGMQVTAYTQTMSDIEAKIGNKAKAGQVI GNFNNVFMLRVRETSTAELLTNQLPKVQVFTSTPASSANDSATGNTAFTSSSHDQVQQVSVPMIEPAHVVGLPKGQCFAL MEGGNLWKIRMPLPGHDPDEVMPADLQALAESMRQTYQVGKVDDTGWWSAPGYQTLNESLPADLLDDFKKIAVAPEDAA >Mature_718_residues AHDYAIESLLRPAVELYTVYVCAAGAFLCVFAPWAFALTPLFGIVTSAGFLALGLVRLKQAWQVLRYRRNIRRLPHYTMT SKEVPVSNQRLFIGLGFRWQQRHTQRLMDTYLPKYASYVEATSLFRAARRFEERAEFAPYPVRLLARATSWDVPINPVRP LPPVGGLPRLHGIEPYEENVSLPLGERVGHSIVLGTTRVGKTRLAELFITQDIRRKKHGKHEVVIVFDPKGDADLLKRMY LEAKRAGRLNEFYVFHLGWPDHSARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFAWRFVNIIARALVALGRRPDYL QIQQHVINIEGIFQEYASKYFDEYDPKAWEAIVAIEGKLNEKNVPFNMKGRPFRVVAIDQYLSQTRVADPVMDGLRSAVR YDKTYFDKIVASLLPLLEKLTTGRMAELISPDYQDVNDPRPIFDWMQVVRKKAVVYIGLDALSDTEVAAAVGNSMFSDLV SVAGHIYKFGVDDGLPGGVPGTKVPINLHADEFNELMGEEFIPMINKGGGAGMQVTAYTQTMSDIEAKIGNKAKAGQVIG NFNNVFMLRVRETSTAELLTNQLPKVQVFTSTPASSANDSATGNTAFTSSSHDQVQQVSVPMIEPAHVVGLPKGQCFALM EGGNLWKIRMPLPGHDPDEVMPADLQALAESMRQTYQVGKVDDTGWWSAPGYQTLNESLPADLLDDFKKIAVAPEDAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80186; Mature: 80055
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHDYAIESLLRPAVELYTVYVCAAGAFLCVFAPWAFALTPLFGIVTSAGFLALGLVRLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAWQVLRYRRNIRRLPHYTMTSKEVPVSNQRLFIGLGFRWQQRHTQRLMDTYLPKYASYV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH EATSLFRAARRFEERAEFAPYPVRLLARATSWDVPINPVRPLPPVGGLPRLHGIEPYEEN HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VSLPLGERVGHSIVLGTTRVGKTRLAELFITQDIRRKKHGKHEVVIVFDPKGDADLLKRM CCCCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH YLEAKRAGRLNEFYVFHLGWPDHSARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFA HHHHHHCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHH WRFVNIIARALVALGRRPDYLQIQQHVINIEGIFQEYASKYFDEYDPKAWEAIVAIEGKL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCC NEKNVPFNMKGRPFRVVAIDQYLSQTRVADPVMDGLRSAVRYDKTYFDKIVASLLPLLEK CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTGRMAELISPDYQDVNDPRPIFDWMQVVRKKAVVYIGLDALSDTEVAAAVGNSMFSDL HHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHH VSVAGHIYKFGVDDGLPGGVPGTKVPINLHADEFNELMGEEFIPMINKGGGAGMQVTAYT HHHHHHHEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCHHHCCCCCCCEEEEEHH QTMSDIEAKIGNKAKAGQVIGNFNNVFMLRVRETSTAELLTNQLPKVQVFTSTPASSAND HHHHHHHHHHCCCCCCCHHEECCCCEEEEEEECCCHHHHHHCCCCCEEEEECCCCCCCCC SATGNTAFTSSSHDQVQQVSVPMIEPAHVVGLPKGQCFALMEGGNLWKIRMPLPGHDPDE CCCCCCEECCCCHHHHHHCCCCCCCCHHEEECCCCCEEEEEECCCEEEEEECCCCCCCCC VMPADLQALAESMRQTYQVGKVDDTGWWSAPGYQTLNESLPADLLDDFKKIAVAPEDAA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AHDYAIESLLRPAVELYTVYVCAAGAFLCVFAPWAFALTPLFGIVTSAGFLALGLVRLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAWQVLRYRRNIRRLPHYTMTSKEVPVSNQRLFIGLGFRWQQRHTQRLMDTYLPKYASYV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH EATSLFRAARRFEERAEFAPYPVRLLARATSWDVPINPVRPLPPVGGLPRLHGIEPYEEN HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VSLPLGERVGHSIVLGTTRVGKTRLAELFITQDIRRKKHGKHEVVIVFDPKGDADLLKRM CCCCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH YLEAKRAGRLNEFYVFHLGWPDHSARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFA HHHHHHCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHH WRFVNIIARALVALGRRPDYLQIQQHVINIEGIFQEYASKYFDEYDPKAWEAIVAIEGKL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCC NEKNVPFNMKGRPFRVVAIDQYLSQTRVADPVMDGLRSAVRYDKTYFDKIVASLLPLLEK CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTGRMAELISPDYQDVNDPRPIFDWMQVVRKKAVVYIGLDALSDTEVAAAVGNSMFSDL HHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHH VSVAGHIYKFGVDDGLPGGVPGTKVPINLHADEFNELMGEEFIPMINKGGGAGMQVTAYT HHHHHHHEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCHHHCCCCCCCEEEEEHH QTMSDIEAKIGNKAKAGQVIGNFNNVFMLRVRETSTAELLTNQLPKVQVFTSTPASSAND HHHHHHHHHHCCCCCCCHHEECCCCEEEEEEECCCHHHHHHCCCCCEEEEECCCCCCCCC SATGNTAFTSSSHDQVQQVSVPMIEPAHVVGLPKGQCFALMEGGNLWKIRMPLPGHDPDE CCCCCCEECCCCHHHHHHCCCCCCCCHHEEECCCCCEEEEEECCCEEEEEECCCCCCCCC VMPADLQALAESMRQTYQVGKVDDTGWWSAPGYQTLNESLPADLLDDFKKIAVAPEDAA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA