| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044693
Identifier: 66044693
GI number: 66044693
Start: 1636210
End: 1636878
Strand: Reverse
Name: 66044693
Synonym: Psyr_1446
Alternate gene names: NA
Gene position: 1636878-1636210 (Counterclockwise)
Preceding gene: 66044694
Following gene: 66044692
Centisome position: 26.86
GC content: 56.5
Gene sequence:
>669_bases ATGAGCCGTTTTTTGAAGTTGGCGGACTCCCAACGCGCCCACATCACAAGCTTGAGAATAGCCATTGTATTGCTCGCGCT TATTAATGCCGGGCTCGGTGTCGGCTGGTGGAGCGCCCCCAAGCAGATGACCGTTCACGTTCCGCCGGATCTGCGCTCGG GCAGTACACGCCTGTGGTGGGACATCCCTCCCCAGTCGGTATACACATTCGGCCTGTACATCTTTCAGCAAATGAACCGA TGGCCGGTTGATGGTGAGCAGGATTACCAGGCAAATATCACCCGTCTTGATGCTTACATCACGCCGTCTTGCAAGCATTA CCTGCAAAGTGATTTTGAACTGCGCAGGTCTAGCGGTGAGCTACGCAAGCGCGTCCGGGGCGTTTACGAAATCCCGGGGC GAGGCTATGGAGATTCGCCCGAGATCAGGACGGTGACCAACTCTATCGACGACTGGACTGTCACGCTCGACATCACAGCC GACGAGTATTACGGCGGGCAGTTGGTCAAGCGTGCCCTCGCGAGATACCCGCTCCACGTTGTACGTATGGACGTCGACCC TGAAACCAATCCCTTCGGCTTGGCCTGGGATTGCTACAACGGCGCACCACAGCGTATCGAGGGCAATGTTGAAGCTCCCG CAACTCCGTCGAAAGGAGTCTTCAAATGA
Upstream 100 bases:
>100_bases AGTTGCAGCTACAGACAGCAATGCTCGGCCCGACCTCATTCAACAATGCCAACCTGGTCCTTCGATCAGGCAACTGGACT TGCCGCCGGAGCGAGCAACG
Downstream 100 bases:
>100_bases GTGTTTTGCGAGTACTCACATGCTCGACATTACTGATGGTGTTGGCTGGCAACGCCCAAGTCGCCTCGGCGGTCGAGATT CTCCGGTGGGAGCGGTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSRFLKLADSQRAHITSLRIAIVLLALINAGLGVGWWSAPKQMTVHVPPDLRSGSTRLWWDIPPQSVYTFGLYIFQQMNR WPVDGEQDYQANITRLDAYITPSCKHYLQSDFELRRSSGELRKRVRGVYEIPGRGYGDSPEIRTVTNSIDDWTVTLDITA DEYYGGQLVKRALARYPLHVVRMDVDPETNPFGLAWDCYNGAPQRIEGNVEAPATPSKGVFK
Sequences:
>Translated_222_residues MSRFLKLADSQRAHITSLRIAIVLLALINAGLGVGWWSAPKQMTVHVPPDLRSGSTRLWWDIPPQSVYTFGLYIFQQMNR WPVDGEQDYQANITRLDAYITPSCKHYLQSDFELRRSSGELRKRVRGVYEIPGRGYGDSPEIRTVTNSIDDWTVTLDITA DEYYGGQLVKRALARYPLHVVRMDVDPETNPFGLAWDCYNGAPQRIEGNVEAPATPSKGVFK >Mature_221_residues SRFLKLADSQRAHITSLRIAIVLLALINAGLGVGWWSAPKQMTVHVPPDLRSGSTRLWWDIPPQSVYTFGLYIFQQMNRW PVDGEQDYQANITRLDAYITPSCKHYLQSDFELRRSSGELRKRVRGVYEIPGRGYGDSPEIRTVTNSIDDWTVTLDITAD EYYGGQLVKRALARYPLHVVRMDVDPETNPFGLAWDCYNGAPQRIEGNVEAPATPSKGVFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25190; Mature: 25059
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFLKLADSQRAHITSLRIAIVLLALINAGLGVGWWSAPKQMTVHVPPDLRSGSTRLWW CCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEE DIPPQSVYTFGLYIFQQMNRWPVDGEQDYQANITRLDAYITPSCKHYLQSDFELRRSSGE ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCHHH LRKRVRGVYEIPGRGYGDSPEIRTVTNSIDDWTVTLDITADEYYGGQLVKRALARYPLHV HHHHHCCEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCEEE VRMDVDPETNPFGLAWDCYNGAPQRIEGNVEAPATPSKGVFK EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRFLKLADSQRAHITSLRIAIVLLALINAGLGVGWWSAPKQMTVHVPPDLRSGSTRLWW CCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEE DIPPQSVYTFGLYIFQQMNRWPVDGEQDYQANITRLDAYITPSCKHYLQSDFELRRSSGE ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCHHH LRKRVRGVYEIPGRGYGDSPEIRTVTNSIDDWTVTLDITADEYYGGQLVKRALARYPLHV HHHHHCCEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCEEE VRMDVDPETNPFGLAWDCYNGAPQRIEGNVEAPATPSKGVFK EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA