| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044572
Identifier: 66044572
GI number: 66044572
Start: 1501766
End: 1502389
Strand: Reverse
Name: 66044572
Synonym: Psyr_1324
Alternate gene names: NA
Gene position: 1502389-1501766 (Counterclockwise)
Preceding gene: 66044574
Following gene: 66044565
Centisome position: 24.65
GC content: 59.46
Gene sequence:
>624_bases ATGTCAGAGATTGTTCAATCATCCATCGGCTATTTGTCGCACTCAGGCGACTTTAGCGTACGCAACAGCCGCACACTGGG TGGTGTGACGCAGCTGTGGTCGGATGCATTTGCCCGGGCGATGGCGGATCAGGTCAGTGAAAGCGCTTCAGTCCCCGTGC ACCCGACGGCCGTTGAGGTGGATGTAGAAACAGGCGAACCGGTCGCTGGCGCAAAAACCCTGAGCAAGATCGTCGAGCAA CGTACCTGCCCGGTCACCGACACCGAGGTCAAGCCTCCAGAGCCGCTGTTCCTGCCGATTGCCGAGTTTGACCTCGATCT TCTGCCTCCACCTGCAGAACCGTTCAGCATGGCTGAAATGATCGAACAGCAACGCCATCTGGAGTTCGAGAGCCACTGGG TACGCCCTACCGTTCTGAATCCTTATGACGATAGCGTCAAACCAGGCCCTGGCCCGCAGCCACGCCCGCTGCATCTGCCG ATTGCCGAATTCGAATGGGAACTGGCCGACAAGCCTGCCCTGCCCCTGGATGAGCAGACCATCGCCGCCCAACAACGCCA GTTCGACTACGAGAACGGCTGGGCACGCCCGCTGATCCTGCAAAACCTGCGGATGGCGGCATAA
Upstream 100 bases:
>100_bases TCATTGCGTTTACACACTCAAAAATTGTTAATGTTCGGCAAAGCCTGCCGATAACCAAGTATCCGGCATTTTGCCAGACC CAAGGCCAGTACTGATCGCT
Downstream 100 bases:
>100_bases GCCCCGAACGCTTCCTGCCGGCAGCTTACCGCGGCTTTACCTGCACACCGACCAGCGCCCCATGTCGACGTGAAAATGAT CGCGATGCGCTGCGTTGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSEIVQSSIGYLSHSGDFSVRNSRTLGGVTQLWSDAFARAMADQVSESASVPVHPTAVEVDVETGEPVAGAKTLSKIVEQ RTCPVTDTEVKPPEPLFLPIAEFDLDLLPPPAEPFSMAEMIEQQRHLEFESHWVRPTVLNPYDDSVKPGPGPQPRPLHLP IAEFEWELADKPALPLDEQTIAAQQRQFDYENGWARPLILQNLRMAA
Sequences:
>Translated_207_residues MSEIVQSSIGYLSHSGDFSVRNSRTLGGVTQLWSDAFARAMADQVSESASVPVHPTAVEVDVETGEPVAGAKTLSKIVEQ RTCPVTDTEVKPPEPLFLPIAEFDLDLLPPPAEPFSMAEMIEQQRHLEFESHWVRPTVLNPYDDSVKPGPGPQPRPLHLP IAEFEWELADKPALPLDEQTIAAQQRQFDYENGWARPLILQNLRMAA >Mature_206_residues SEIVQSSIGYLSHSGDFSVRNSRTLGGVTQLWSDAFARAMADQVSESASVPVHPTAVEVDVETGEPVAGAKTLSKIVEQR TCPVTDTEVKPPEPLFLPIAEFDLDLLPPPAEPFSMAEMIEQQRHLEFESHWVRPTVLNPYDDSVKPGPGPQPRPLHLPI AEFEWELADKPALPLDEQTIAAQQRQFDYENGWARPLILQNLRMAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22962; Mature: 22831
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIVQSSIGYLSHSGDFSVRNSRTLGGVTQLWSDAFARAMADQVSESASVPVHPTAVEV CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE DVETGEPVAGAKTLSKIVEQRTCPVTDTEVKPPEPLFLPIAEFDLDLLPPPAEPFSMAEM ECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCHHHHHHH IEQQRHLEFESHWVRPTVLNPYDDSVKPGPGPQPRPLHLPIAEFEWELADKPALPLDEQT HHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHCCCCCCCCCCHHH IAAQQRQFDYENGWARPLILQNLRMAA HHHHHHHCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SEIVQSSIGYLSHSGDFSVRNSRTLGGVTQLWSDAFARAMADQVSESASVPVHPTAVEV HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE DVETGEPVAGAKTLSKIVEQRTCPVTDTEVKPPEPLFLPIAEFDLDLLPPPAEPFSMAEM ECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCHHHHHHH IEQQRHLEFESHWVRPTVLNPYDDSVKPGPGPQPRPLHLPIAEFEWELADKPALPLDEQT HHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHCCCCCCCCCCHHH IAAQQRQFDYENGWARPLILQNLRMAA HHHHHHHCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA