Click here to switch to the map view.

The map label for this gene is yafK [C]

Identifier: 66044519

GI number: 66044519

Start: 1437672

End: 1438235

Strand: Reverse

Name: yafK [C]

Synonym: Psyr_1271

Alternate gene names: 66044519

Gene position: 1438235-1437672 (Counterclockwise)

Preceding gene: 66044520

Following gene: 66044516

Centisome position: 23.6

GC content: 54.96

Gene sequence:

>564_bases
ATGCGCTGGTTGCTCGCACTCTTTTGCATGTCGTTCATGCCGCTTTCGCAGGCCGCGCTTACTCAAACCATCGTGCCCAA
GGGCAGCGAACAGAAAATCATCAATAACAAGGTCATCAATACCGAGAGTATCGCCAGCAAGCCGATCGATAAGGTGCTGG
TGCTCAAGTCAGCGCGCCAATTGCAGCTGATCAGCGGTGGCGAGGCCTTGAAGACCTACCGAATCTCGCTGGGCAAGAAC
CCCAAGGGCACCAAGTTGCAGGAAGGCGACCAACGCACGCCGGAAGGTTTCTACTGGATCGACTGGCGTAAACCCAGCAA
CAACTACAACCTGTCGATGCACATTTCCTACCCGAATGTCTCGGACTCGGCACGCGCACGCTCCGAGGGCGTGAAACCGG
GCAGCATGATCATGCTTCATGGCACACCGGTGGATGAAGAGTATCCGGAATGGTATTTCCACACGCTGGACTGGACCAAC
GGCTGCATTGCGCTGAAGAACAACGACATGCGGGAAATATGGGATCTGGTGAAAGACGGGACGATGATCGAAATTCGACC
TTGA

Upstream 100 bases:

>100_bases
AGCGCCCTTCCCCCGTCCCGTCCGTTGCTGGACACCTGAACGCCAGGGTCGCACACAACATCGGCGCTTTTGTCAAAGAA
GTATCTTCAGGGAAATCGTA

Downstream 100 bases:

>100_bases
ATGTGCGGCGTTGCGCATTCGCGAGCAAGCTCGCTCCCACAAGACTCAAGATGATTATCGTCCCCACGCTCCAGCGTGGT
GACGCATTTCCGGACGCTGC

Product: ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRWLLALFCMSFMPLSQAALTQTIVPKGSEQKIINNKVINTESIASKPIDKVLVLKSARQLQLISGGEALKTYRISLGKN
PKGTKLQEGDQRTPEGFYWIDWRKPSNNYNLSMHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTN
GCIALKNNDMREIWDLVKDGTMIEIRP

Sequences:

>Translated_187_residues
MRWLLALFCMSFMPLSQAALTQTIVPKGSEQKIINNKVINTESIASKPIDKVLVLKSARQLQLISGGEALKTYRISLGKN
PKGTKLQEGDQRTPEGFYWIDWRKPSNNYNLSMHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTN
GCIALKNNDMREIWDLVKDGTMIEIRP
>Mature_187_residues
MRWLLALFCMSFMPLSQAALTQTIVPKGSEQKIINNKVINTESIASKPIDKVLVLKSARQLQLISGGEALKTYRISLGKN
PKGTKLQEGDQRTPEGFYWIDWRKPSNNYNLSMHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTN
GCIALKNNDMREIWDLVKDGTMIEIRP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21303; Mature: 21303

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWLLALFCMSFMPLSQAALTQTIVPKGSEQKIINNKVINTESIASKPIDKVLVLKSARQ
CHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEECCCCEECCHHHHHCCHHHHHHHHCCCE
LQLISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDWRKPSNNYNLSMHISYPNV
EEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCC
SDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMREIWDLVKDG
CCHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHCCC
TMIEIRP
CEEEEEC
>Mature Secondary Structure
MRWLLALFCMSFMPLSQAALTQTIVPKGSEQKIINNKVINTESIASKPIDKVLVLKSARQ
CHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEECCCCEECCHHHHHCCHHHHHHHHCCCE
LQLISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDWRKPSNNYNLSMHISYPNV
EEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCC
SDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMREIWDLVKDG
CCHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHCCC
TMIEIRP
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA