Click here to switch to the map view.

The map label for this gene is fdx [H]

Identifier: 66044490

GI number: 66044490

Start: 1399292

End: 1399633

Strand: Direct

Name: fdx [H]

Synonym: Psyr_1242

Alternate gene names: 66044490

Gene position: 1399292-1399633 (Clockwise)

Preceding gene: 66044489

Following gene: 66044491

Centisome position: 22.96

GC content: 58.77

Gene sequence:

>342_bases
ATGCCGCAGGTGATTTTTCTGCCCCACGCCGAGCATTGCCCGGACGGGCTGGTTGTAGAAGTGGAGCCCGGCACGTCTAT
TCTCGACATTGCCCACGAGCACCACATCGAGATTGAAAGCGCCTGTGGTGGCGTGTGTGCGTGCACTACCTGCCATTGCG
TCATTCGCGAAGGGTTCGATTCGCTGAATGAGGCCGATGAGCTGGAAGAAGACATGCTCGACAAGGCGTGGGGGCTGGAA
CGGCAGTCACGTCTGTCCTGTCAGGCCATTGTCGGCAACGAAGACCTGACGGTCGAAATACCCAAGTATTCGCTCAACCA
CGCCGCTGAAGCGCCGCACTGA

Upstream 100 bases:

>100_bases
TCTGTCGCAGGTGACCGATGCGTTTGCTGCCCGACGCCTCGATTCGACGGTAAAAGCCGCACTGGCCGGGCGCAACTTGA
ATGAGATTGAGGAATAACTG

Downstream 100 bases:

>100_bases
TTCAAGGATTGCTCATGAGTCTCAAATGGGTTGATGTTCAGGAAATCGCCATCCAGCTGGCTGAAAGCCACCCGGAGGTA
AATCCGCTCACCGTGAGCTT

Product: ferredoxin, 2Fe-2S type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPQVIFLPHAEHCPDGLVVEVEPGTSILDIAHEHHIEIESACGGVCACTTCHCVIREGFDSLNEADELEEDMLDKAWGLE
RQSRLSCQAIVGNEDLTVEIPKYSLNHAAEAPH

Sequences:

>Translated_113_residues
MPQVIFLPHAEHCPDGLVVEVEPGTSILDIAHEHHIEIESACGGVCACTTCHCVIREGFDSLNEADELEEDMLDKAWGLE
RQSRLSCQAIVGNEDLTVEIPKYSLNHAAEAPH
>Mature_112_residues
PQVIFLPHAEHCPDGLVVEVEPGTSILDIAHEHHIEIESACGGVCACTTCHCVIREGFDSLNEADELEEDMLDKAWGLER
QSRLSCQAIVGNEDLTVEIPKYSLNHAAEAPH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788874, Length=110, Percent_Identity=63.6363636363636, Blast_Score=149, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17544202, Length=91, Percent_Identity=37.3626373626374, Blast_Score=63, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6325004, Length=92, Percent_Identity=42.3913043478261, Blast_Score=76, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24661503, Length=91, Percent_Identity=40.6593406593407, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12387; Mature: 12256

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQVIFLPHAEHCPDGLVVEVEPGTSILDIAHEHHIEIESACGGVCACTTCHCVIREGFD
CCEEEECCCCCCCCCCCEEEECCCCCEEEHHHHCCEEECCCCCCCHHHHHHHHHHHHHHH
SLNEADELEEDMLDKAWGLERQSRLSCQAIVGNEDLTVEIPKYSLNHAAEAPH
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
PQVIFLPHAEHCPDGLVVEVEPGTSILDIAHEHHIEIESACGGVCACTTCHCVIREGFD
CEEEECCCCCCCCCCCEEEECCCCCEEEHHHHCCEEECCCCCCCHHHHHHHHHHHHHHH
SLNEADELEEDMLDKAWGLERQSRLSCQAIVGNEDLTVEIPKYSLNHAAEAPH
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]