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The map label for this gene is HrpB

Identifier: 66044445

GI number: 66044445

Start: 1354726

End: 1355100

Strand: Direct

Name: HrpB

Synonym: Psyr_1194

Alternate gene names: NA

Gene position: 1354726-1355100 (Clockwise)

Preceding gene: 66044444

Following gene: 66044446

Centisome position: 22.23

GC content: 58.93

Gene sequence:

>375_bases
GTGACCATTTCCCACCTTGGTAATGTTAAAAGCATCTCGCCGGAACTCGGGCAGGATGTGCCACAGGGGCTCGTTTCAGA
ACCGGCCCAGGCGGATGTCGACATCTTCACCGCTGCCACGCAGCCGGACGGCGTTTCGAGCGGAGCGCCGCTTTCCGAGC
ATATCGCCAGCGCAATTTCCGGCGGTCTGGGCGAAACCGAAAAAATGTCTCAGCAAGCAATGCGGTCGATGAAGAAAGCC
TCCGGGACTGGAGATGCGCTGGATATCGCGGCGATGACCAGGACCCTGTCGCAATGCTCTTTGCAGACTGCGCTCACGAC
CAAGGTGGTGAGCAAGACTGCGCAGGCGCTCGACAAGCTGACTAACTTGCAGTAG

Upstream 100 bases:

>100_bases
GAGCGCTGCGCAAATCGCCACCTTGCTGGTCAGTACGCTGCTGCAAGGCACCCGCAATCAGGCCGCGGCCTGACCGACAC
CCGCCTGACGGAGAACTCAC

Downstream 100 bases:

>100_bases
AGGTTTCCGTGAAATTTCTGAGCGCAGGGCTGCTGCTGATTTGCATGGTATTGCTCGGCGGCTGCAGTGATGAAACCGAT
CTGTTCACCGGCTTGTCCGA

Product: type III secretion protein HrpB

Products: NA

Alternate protein names: YscI/HrpB Family Type III Secretion Apparatus Protein; Type III Secretion Protein HrpB

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTISHLGNVKSISPELGQDVPQGLVSEPAQADVDIFTAATQPDGVSSGAPLSEHIASAISGGLGETEKMSQQAMRSMKKA
SGTGDALDIAAMTRTLSQCSLQTALTTKVVSKTAQALDKLTNLQ

Sequences:

>Translated_124_residues
MTISHLGNVKSISPELGQDVPQGLVSEPAQADVDIFTAATQPDGVSSGAPLSEHIASAISGGLGETEKMSQQAMRSMKKA
SGTGDALDIAAMTRTLSQCSLQTALTTKVVSKTAQALDKLTNLQ
>Mature_123_residues
TISHLGNVKSISPELGQDVPQGLVSEPAQADVDIFTAATQPDGVSSGAPLSEHIASAISGGLGETEKMSQQAMRSMKKAS
GTGDALDIAAMTRTLSQCSLQTALTTKVVSKTAQALDKLTNLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12742; Mature: 12610

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISHLGNVKSISPELGQDVPQGLVSEPAQADVDIFTAATQPDGVSSGAPLSEHIASAIS
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHEECCCCCCCCCCCCCHHHHHHHHHH
GGLGETEKMSQQAMRSMKKASGTGDALDIAAMTRTLSQCSLQTALTTKVVSKTAQALDKL
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNLQ
HCCC
>Mature Secondary Structure 
TISHLGNVKSISPELGQDVPQGLVSEPAQADVDIFTAATQPDGVSSGAPLSEHIASAIS
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHEECCCCCCCCCCCCCHHHHHHHHHH
GGLGETEKMSQQAMRSMKKASGTGDALDIAAMTRTLSQCSLQTALTTKVVSKTAQALDKL
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNLQ
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA