| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yeaS [C]
Identifier: 66044424
GI number: 66044424
Start: 1326969
End: 1327589
Strand: Direct
Name: yeaS [C]
Synonym: Psyr_1173
Alternate gene names: 66044424
Gene position: 1326969-1327589 (Clockwise)
Preceding gene: 66044411
Following gene: 66044426
Centisome position: 21.78
GC content: 56.2
Gene sequence:
>621_bases ATGCTTGATCTGACTCAGGTTCTTACGTATTCGGCAGCGTTGGGTATTGCCGCCGCCATTCCTGGCCCCGGTATGGCAGC GCTGGTCGCACGGAGTGTCAGCGGCGGTGCGGTGTCAGGCTTTTGCCTGCTGTCCGGGCTGATCCTCGGTGACCTGACCT ATCTTTCATTTGCAGTATTTGGCCTTGCCATGATTGCCGAACACTTCAATGCGTTGTTTCAGGTAGTGCGATGGGGGGCC GCGATTTATCTGTGCTACCTGGCCTGGCAGTTCTGGTTCGCAGATCATCAAGCCATAGAAATCGGAAAATCAGCGAAGAA AAAAGAGTTGCTGTCCGCGGCCGCGTCCGGACTGACCATTACCTTGGGCAACCCCAAGACCATTGCCTTTTATCTGGCGC TTTTGCCGTTGGTCATCAATCTTGAAACGGTCTCTTTGCAGACATGGGGGCTGGTTCTGGTGCCGCTGACGGTGCTGGTA CTGCTGGCGGTCGGGGCCGTGTTCATATTTGCCGCCTTGCGCATTCGACATTTGCTGTCGAGTGAGCGTGCGCAAAGAAA ACTGTTTCGCGGTGCGGCAGCAATCATGGTCGCGGCAGCAGCTTCGATGCTGGTGCGCTGA
Upstream 100 bases:
>100_bases TCTTTCCGCGTGGAAACACGTAATATTTTTCGACACAGGGGTTTGCCTTCTGGATCTCAAGCAAGCTCATTAATCAGCGT CAAGTCTCAAGGAGTGCAAC
Downstream 100 bases:
>100_bases TCTGCCTGGAGGGTGGATGAGGCCGTTGACGACCTCATCCGGTCGCCGTTACAGCTCCTTCTTCAGATGCTTTTCGATCT GCTCCAGCGACTTGCCCTTG
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLDLTQVLTYSAALGIAAAIPGPGMAALVARSVSGGAVSGFCLLSGLILGDLTYLSFAVFGLAMIAEHFNALFQVVRWGA AIYLCYLAWQFWFADHQAIEIGKSAKKKELLSAAASGLTITLGNPKTIAFYLALLPLVINLETVSLQTWGLVLVPLTVLV LLAVGAVFIFAALRIRHLLSSERAQRKLFRGAAAIMVAAAASMLVR
Sequences:
>Translated_206_residues MLDLTQVLTYSAALGIAAAIPGPGMAALVARSVSGGAVSGFCLLSGLILGDLTYLSFAVFGLAMIAEHFNALFQVVRWGA AIYLCYLAWQFWFADHQAIEIGKSAKKKELLSAAASGLTITLGNPKTIAFYLALLPLVINLETVSLQTWGLVLVPLTVLV LLAVGAVFIFAALRIRHLLSSERAQRKLFRGAAAIMVAAAASMLVR >Mature_206_residues MLDLTQVLTYSAALGIAAAIPGPGMAALVARSVSGGAVSGFCLLSGLILGDLTYLSFAVFGLAMIAEHFNALFQVVRWGA AIYLCYLAWQFWFADHQAIEIGKSAKKKELLSAAASGLTITLGNPKTIAFYLALLPLVINLETVSLQTWGLVLVPLTVLV LLAVGAVFIFAALRIRHLLSSERAQRKLFRGAAAIMVAAAASMLVR
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 21821; Mature: 21821
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLTQVLTYSAALGIAAAIPGPGMAALVARSVSGGAVSGFCLLSGLILGDLTYLSFAVF CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH GLAMIAEHFNALFQVVRWGAAIYLCYLAWQFWFADHQAIEIGKSAKKKELLSAAASGLTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHCCCEE TLGNPKTIAFYLALLPLVINLETVSLQTWGLVLVPLTVLVLLAVGAVFIFAALRIRHLLS EECCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SERAQRKLFRGAAAIMVAAAASMLVR HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLDLTQVLTYSAALGIAAAIPGPGMAALVARSVSGGAVSGFCLLSGLILGDLTYLSFAVF CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH GLAMIAEHFNALFQVVRWGAAIYLCYLAWQFWFADHQAIEIGKSAKKKELLSAAASGLTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHCCCEE TLGNPKTIAFYLALLPLVINLETVSLQTWGLVLVPLTVLVLLAVGAVFIFAALRIRHLLS EECCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SERAQRKLFRGAAAIMVAAAASMLVR HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]