Click here to switch to the map view.

The map label for this gene is algX [H]

Identifier: 66044310

GI number: 66044310

Start: 1195942

End: 1197381

Strand: Reverse

Name: algX [H]

Synonym: Psyr_1057

Alternate gene names: 66044310

Gene position: 1197381-1195942 (Counterclockwise)

Preceding gene: 66044311

Following gene: 66044309

Centisome position: 19.65

GC content: 58.61

Gene sequence:

>1440_bases
ATGCACGCACATCTGATCAAGCTGTTGAGCCTGTCCAGCCTCACCGCCGCCTTGATGGCCGCCGCGGGTGTCGCTCGGGC
AGACGACTCGCAAGCGCCGACGTTCAAGGCCGAGCCTTGCTGCTCGCTGTGCCCGGCCGCGCATGACGCGAAAAACTACA
CCACGCGCTATCAGCAGAACTTCACCACGCTGGTCCAGGCTCAGGGCGACTGGCTGTTCCGGACTCAGGAAGACCTGCGC
ACCGAGTTCGATACCACGCCTGCCGGCTATCGCCGCATGAAAGAACTGCACGATGCGTTCAAGAGCAAAGGCGTCGAACT
GGTCGTGGTTTATCAGCCAACCCGTGGTCTGGTGGATCGCAACAAATTGTTCCCGGCCGAACGCGACAAGTTCGACTACG
ACAAGGCGCTGAAAAACTATCAGGCCATGCTCGGCCGCTTCAGCAAGATGGGCTACTGGGTGCCTGACCTGTCGCCGTTG
ACCAACGAGCAGCAGGCGCATGATTTCTACTTCCGCGGTGACCAGCACTGGACGCCGTATGGCGCGCAGCGTACGGCGAA
GATCGTTGCCGAAACCGTGAAGAAAGTTCCGGGTTATAGCGACATCCCCAAGCGTGAGTTCGAAAGCCATATTTCCGGGC
GCATGGGCAAGACGGGCACTTTGCACAATATGGCGGGTCAATTGTGCGGCACCAGCTACGCGATCCAGTACATGGACCAG
TTCACCACCGAGCCCAAGGGTGAGGCGGGCGACGGCGACCTGTTCGGCGATTCCGGTAACCCGGAAATCACCCTGGTCGG
TACCAGCCACAGCGGCAAGAACTACAACTTCGCTGGCTTCCTCCAGGAATACATGGGCGCTGACGTGTTGAACGTGGCGT
TCCCTGGTGGTGGCCTGGAAGGTTCGATGCTCCAGTACCTGGGCAGTGAAGACTTCCAGAAGCGTCCGCCGAAAATTCTC
ATCTGGGAATTCTCGCCGCTGTATCGCCTGGATCAGGAGACCATCTATCGCCAGATGATGTCGCTGCTGGACAACGGCTG
TGAAGGCAAGCCTGCCGTGATGAGCGCCAGCACCACCCTCAAGCCGGGCACCAACGAAGTGTTGGTCAACGGCAAGAATG
GCATCAAGGACATTCGCAACGGCAGCAATCAGATCGACATCAAGTTTGACGACACCTCGGTGAAAGTCCTTCAGGCCAGG
CTCTGGTACATGAACGGTCGCCACGAGGATCTGAAAATCGAGAAACCGGAAACGTCAGACACCGATGGACGCTTCGCCTT
TGAATTGCGCGAGGATGAGGATTGGGCCAACCAGCAACTGCTGGCGCTGGAAATCCAGGGACCGGAAGCAGGCACGGCAC
CACAAAAAGTCGAAGCCAAAGTATGCAAACGCAACGTGTTCCCGAGCGCTGCGACACACACCGCTCAAGCCGGACTATGA

Upstream 100 bases:

>100_bases
AGGACGAAATCCTCGACCTGCTGGTACGCCAGAAAAAAGCCGTATTGATCGACCCCGTCGAAAGCCAGACCGAGCTGCGG
GAATGAGGAAGGGTATTGTT

Downstream 100 bases:

>100_bases
GGTGACTTATGCAGACTCCTAAACTGATTCGCCCTACCCTGCTGTCGATGGCAATCCTGTCATCGATGGCCTGGGCCACG
GGCGCATCCGCCGCACTGGT

Product: alginate biosynthesis protein AlgX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MHAHLIKLLSLSSLTAALMAAAGVARADDSQAPTFKAEPCCSLCPAAHDAKNYTTRYQQNFTTLVQAQGDWLFRTQEDLR
TEFDTTPAGYRRMKELHDAFKSKGVELVVVYQPTRGLVDRNKLFPAERDKFDYDKALKNYQAMLGRFSKMGYWVPDLSPL
TNEQQAHDFYFRGDQHWTPYGAQRTAKIVAETVKKVPGYSDIPKREFESHISGRMGKTGTLHNMAGQLCGTSYAIQYMDQ
FTTEPKGEAGDGDLFGDSGNPEITLVGTSHSGKNYNFAGFLQEYMGADVLNVAFPGGGLEGSMLQYLGSEDFQKRPPKIL
IWEFSPLYRLDQETIYRQMMSLLDNGCEGKPAVMSASTTLKPGTNEVLVNGKNGIKDIRNGSNQIDIKFDDTSVKVLQAR
LWYMNGRHEDLKIEKPETSDTDGRFAFELREDEDWANQQLLALEIQGPEAGTAPQKVEAKVCKRNVFPSAATHTAQAGL

Sequences:

>Translated_479_residues
MHAHLIKLLSLSSLTAALMAAAGVARADDSQAPTFKAEPCCSLCPAAHDAKNYTTRYQQNFTTLVQAQGDWLFRTQEDLR
TEFDTTPAGYRRMKELHDAFKSKGVELVVVYQPTRGLVDRNKLFPAERDKFDYDKALKNYQAMLGRFSKMGYWVPDLSPL
TNEQQAHDFYFRGDQHWTPYGAQRTAKIVAETVKKVPGYSDIPKREFESHISGRMGKTGTLHNMAGQLCGTSYAIQYMDQ
FTTEPKGEAGDGDLFGDSGNPEITLVGTSHSGKNYNFAGFLQEYMGADVLNVAFPGGGLEGSMLQYLGSEDFQKRPPKIL
IWEFSPLYRLDQETIYRQMMSLLDNGCEGKPAVMSASTTLKPGTNEVLVNGKNGIKDIRNGSNQIDIKFDDTSVKVLQAR
LWYMNGRHEDLKIEKPETSDTDGRFAFELREDEDWANQQLLALEIQGPEAGTAPQKVEAKVCKRNVFPSAATHTAQAGL
>Mature_479_residues
MHAHLIKLLSLSSLTAALMAAAGVARADDSQAPTFKAEPCCSLCPAAHDAKNYTTRYQQNFTTLVQAQGDWLFRTQEDLR
TEFDTTPAGYRRMKELHDAFKSKGVELVVVYQPTRGLVDRNKLFPAERDKFDYDKALKNYQAMLGRFSKMGYWVPDLSPL
TNEQQAHDFYFRGDQHWTPYGAQRTAKIVAETVKKVPGYSDIPKREFESHISGRMGKTGTLHNMAGQLCGTSYAIQYMDQ
FTTEPKGEAGDGDLFGDSGNPEITLVGTSHSGKNYNFAGFLQEYMGADVLNVAFPGGGLEGSMLQYLGSEDFQKRPPKIL
IWEFSPLYRLDQETIYRQMMSLLDNGCEGKPAVMSASTTLKPGTNEVLVNGKNGIKDIRNGSNQIDIKFDDTSVKVLQAR
LWYMNGRHEDLKIEKPETSDTDGRFAFELREDEDWANQQLLALEIQGPEAGTAPQKVEAKVCKRNVFPSAATHTAQAGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AlgX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53440; Mature: 53440

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAHLIKLLSLSSLTAALMAAAGVARADDSQAPTFKAEPCCSLCPAAHDAKNYTTRYQQN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHH
FTTLVQAQGDWLFRTQEDLRTEFDTTPAGYRRMKELHDAFKSKGVELVVVYQPTRGLVDR
HEEEEEECCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCH
NKLFPAERDKFDYDKALKNYQAMLGRFSKMGYWVPDLSPLTNEQQAHDFYFRGDQHWTPY
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
GAQRTAKIVAETVKKVPGYSDIPKREFESHISGRMGKTGTLHNMAGQLCGTSYAIQYMDQ
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHH
FTTEPKGEAGDGDLFGDSGNPEITLVGTSHSGKNYNFAGFLQEYMGADVLNVAFPGGGLE
HCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCC
GSMLQYLGSEDFQKRPPKILIWEFSPLYRLDQETIYRQMMSLLDNGCEGKPAVMSASTTL
HHHHHHCCCCHHHHCCCEEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCEE
KPGTNEVLVNGKNGIKDIRNGSNQIDIKFDDTSVKVLQARLWYMNGRHEDLKIEKPETSD
CCCCCEEEEECCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEECCCCCC
TDGRFAFELREDEDWANQQLLALEIQGPEAGTAPQKVEAKVCKRNVFPSAATHTAQAGL
CCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHCCHHHCCC
>Mature Secondary Structure
MHAHLIKLLSLSSLTAALMAAAGVARADDSQAPTFKAEPCCSLCPAAHDAKNYTTRYQQN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHH
FTTLVQAQGDWLFRTQEDLRTEFDTTPAGYRRMKELHDAFKSKGVELVVVYQPTRGLVDR
HEEEEEECCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCH
NKLFPAERDKFDYDKALKNYQAMLGRFSKMGYWVPDLSPLTNEQQAHDFYFRGDQHWTPY
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
GAQRTAKIVAETVKKVPGYSDIPKREFESHISGRMGKTGTLHNMAGQLCGTSYAIQYMDQ
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHH
FTTEPKGEAGDGDLFGDSGNPEITLVGTSHSGKNYNFAGFLQEYMGADVLNVAFPGGGLE
HCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCC
GSMLQYLGSEDFQKRPPKILIWEFSPLYRLDQETIYRQMMSLLDNGCEGKPAVMSASTTL
HHHHHHCCCCHHHHCCCEEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCEE
KPGTNEVLVNGKNGIKDIRNGSNQIDIKFDDTSVKVLQARLWYMNGRHEDLKIEKPETSD
CCCCCEEEEECCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEECCCCCC
TDGRFAFELREDEDWANQQLLALEIQGPEAGTAPQKVEAKVCKRNVFPSAATHTAQAGL
CCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]