Click here to switch to the map view.

The map label for this gene is 66044282

Identifier: 66044282

GI number: 66044282

Start: 1159307

End: 1161271

Strand: Reverse

Name: 66044282

Synonym: Psyr_1029

Alternate gene names: NA

Gene position: 1161271-1159307 (Counterclockwise)

Preceding gene: 66044283

Following gene: 66044281

Centisome position: 19.06

GC content: 62.9

Gene sequence:

>1965_bases
ATGAAGCGCCCCTTCATCCTGTCGCTGCTGGTGACCGGCCTGAGTCTTTCTTCGCCGTTCAGCCAGGCAGAAACCCTGCC
TTTGCCGTTGACCGGCCCGGCGTATGCCATCGCCAACGAAGCCTACATGGCCTACAACCGCAAGGATTACGACCTGGCCA
TTGCCAAAGCGAACGAAGCGTTGCGTCAGCGCGGTGACGCTCAGCAGTTGCGTGACCTCATTACGTTGGCCGAACGCGAC
AAGTACCGCCGCGATCACCCGCAACGCGCTTACAAGACGCGTCCGCAACCTGGCTATCTGGAAGGCAATCGGGCGCTGCG
CGCCTACGCCAACCGCGACTACGACGGCTCGGCCAGTCATGCGCGCAAGGCCATTGCCCAGGCACCGAAGAACCTCGATT
ACCGCATGATGCTGATCGAGGCACTGCAACGTCAGCAGCGTCTTGATCAAGCACAGGCAGCGATCAACGATGCCGAGCAG
GCACTGGGGCCGCAACAGGTGCTGACGCGTCGTCGGCAGGCGATTCAGGAGCAGGTGGCGGTCGACAAGGCGGCCACCGG
CTACAAGGCACTGGCTCGCGGAGATAACGACACCGCAGTCAGCGAGGCGCGGGAGGCTGTCCGCAGTTTCCCAAAGCAGA
TGGCCTACCGGAAATTACTGGTCAGCGCCCTGATTGCCCAAGGGCAGTATGCCGAAGCGCGCTCTGCGGCCACCGAAGCG
CTGGCGCTGAATGGCAACGACGCCACCCTGCTCGTCCAGCGCGGACAAATGCGTCAACGCCTGGGCGATCAGGACGGTGC
GCGTCAGGACTTCGCCCAGGCCATGGCGGTCGGCAACCTGCCGCTGCGTGAACAGGCCTCGTTGTACGCCGCCATGGGCC
AGCCGAGTGAGGCATTGCAACGCTTGCAGAAAGCACGCGACGCGGGCGAACTGCAACCCGGCGATGAAGTGCAGATAGCC
TATTTCCTCAGCCAGGCGGGCGATGATCAAGGTGCGCTGGATACGTTCAAGCGTGTTGACCGTCAGTCCGGCCTCAAGCC
ACGCGAAGTGCAGGATGCCGCCTACAGCGCGATGCGCACGTCGAACGATGCGCAGGCCATCGCCTACTTCAAGCGCGTGC
TCGATTACCAGCAGACCGGCGATCTGCAGATGCCCGCGCAACAGGTGTTCGATACGCGACGTGCCGTTTCTGATCTGTCC
CGTGAATGGGGCCTGACCAACACCACGACTTATCGGGGCGCCAGCACCAGCAGCGGCCTGAGCGGCGCACCCGGCGGCAG
CAATGACAGCGTGCAGAACAGCACCGAAGTGTTCTGGCGACCCTTCGGTTACCGCAATGCGCGCTTCGTCGAGCTTTACG
GACGCGTCACCGACACGCTGTGGAGCAAGGAAGGCGACTCCGACACAGGCGCGGACGCTTTGCAGGGCGCGCTCGGTATC
CGGGTCAAGCCGTTCAGCGCAGTCAACGTGATCGGTGCCTTCGAACGCACCTTTCCGCTAGGCAACTCGAACGCCGACGG
CGACTGGCTGGTGCGCCTGGGCTACGGCTCGAGCATCGGCACCGACCTGCGCGTCGATGTACCGAGCTGGTGGACGTCGC
AGCTGTACGCTGAAGGCGGGCGCTATCTGCAGGACAAGCGCAACTATTTCAACAGCGAGTGGCAGGTCGGACGCAGCTTC
CGTCTGGACAGCATCAGCCCGCGGCTGGTGGTGTTTCCCCATGTGGTCGCCGCAGTGGACTACGATTCGAAGATGCGCAG
TGAGGTCGACAGTCTCGGCCGTAGCAGCACATCATCGGGTAATGCTGGCGGGCTTGGTGTCGGTACGGGCGTGCGTTACT
GGTTCCGCGAGGATAAGTACAAGGCGCCGCAGTCGTATGTCGACTTCTCCGTGCAGTATCGCGAGAAAGTGTTTGGCGAT
GACCGCGCAGAAGGCGTTTTCGCACGCATGACGTTCTCGTGGTGA

Upstream 100 bases:

>100_bases
ACCTGGTCGACATTGGCGTGCTGCCCAGAGAAACCATCGAACAGGCTGTGGCACGTCAGCACAACCATTACCGATCTGAC
GATCAAACGGAGCAGCCACT

Downstream 100 bases:

>100_bases
CCCGCGCCCGTCACCCATCAGGGAGTAATGTTTGAAGGCTCTGGCCGCACTGCTGCGACAGGCAACATTGATCAAGACCT
CGGTGGCCGCCCTGCTGGTG

Product: peptidase aspartic, active site

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family; Tetratricopeptide Repeat-Containing Protein; Signal Peptide Protein

Number of amino acids: Translated: 654; Mature: 654

Protein sequence:

>654_residues
MKRPFILSLLVTGLSLSSPFSQAETLPLPLTGPAYAIANEAYMAYNRKDYDLAIAKANEALRQRGDAQQLRDLITLAERD
KYRRDHPQRAYKTRPQPGYLEGNRALRAYANRDYDGSASHARKAIAQAPKNLDYRMMLIEALQRQQRLDQAQAAINDAEQ
ALGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEA
LALNGNDATLLVQRGQMRQRLGDQDGARQDFAQAMAVGNLPLREQASLYAAMGQPSEALQRLQKARDAGELQPGDEVQIA
YFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAYFKRVLDYQQTGDLQMPAQQVFDTRRAVSDLS
REWGLTNTTTYRGASTSSGLSGAPGGSNDSVQNSTEVFWRPFGYRNARFVELYGRVTDTLWSKEGDSDTGADALQGALGI
RVKPFSAVNVIGAFERTFPLGNSNADGDWLVRLGYGSSIGTDLRVDVPSWWTSQLYAEGGRYLQDKRNYFNSEWQVGRSF
RLDSISPRLVVFPHVVAAVDYDSKMRSEVDSLGRSSTSSGNAGGLGVGTGVRYWFREDKYKAPQSYVDFSVQYREKVFGD
DRAEGVFARMTFSW

Sequences:

>Translated_654_residues
MKRPFILSLLVTGLSLSSPFSQAETLPLPLTGPAYAIANEAYMAYNRKDYDLAIAKANEALRQRGDAQQLRDLITLAERD
KYRRDHPQRAYKTRPQPGYLEGNRALRAYANRDYDGSASHARKAIAQAPKNLDYRMMLIEALQRQQRLDQAQAAINDAEQ
ALGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEA
LALNGNDATLLVQRGQMRQRLGDQDGARQDFAQAMAVGNLPLREQASLYAAMGQPSEALQRLQKARDAGELQPGDEVQIA
YFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAYFKRVLDYQQTGDLQMPAQQVFDTRRAVSDLS
REWGLTNTTTYRGASTSSGLSGAPGGSNDSVQNSTEVFWRPFGYRNARFVELYGRVTDTLWSKEGDSDTGADALQGALGI
RVKPFSAVNVIGAFERTFPLGNSNADGDWLVRLGYGSSIGTDLRVDVPSWWTSQLYAEGGRYLQDKRNYFNSEWQVGRSF
RLDSISPRLVVFPHVVAAVDYDSKMRSEVDSLGRSSTSSGNAGGLGVGTGVRYWFREDKYKAPQSYVDFSVQYREKVFGD
DRAEGVFARMTFSW
>Mature_654_residues
MKRPFILSLLVTGLSLSSPFSQAETLPLPLTGPAYAIANEAYMAYNRKDYDLAIAKANEALRQRGDAQQLRDLITLAERD
KYRRDHPQRAYKTRPQPGYLEGNRALRAYANRDYDGSASHARKAIAQAPKNLDYRMMLIEALQRQQRLDQAQAAINDAEQ
ALGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEA
LALNGNDATLLVQRGQMRQRLGDQDGARQDFAQAMAVGNLPLREQASLYAAMGQPSEALQRLQKARDAGELQPGDEVQIA
YFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAYFKRVLDYQQTGDLQMPAQQVFDTRRAVSDLS
REWGLTNTTTYRGASTSSGLSGAPGGSNDSVQNSTEVFWRPFGYRNARFVELYGRVTDTLWSKEGDSDTGADALQGALGI
RVKPFSAVNVIGAFERTFPLGNSNADGDWLVRLGYGSSIGTDLRVDVPSWWTSQLYAEGGRYLQDKRNYFNSEWQVGRSF
RLDSISPRLVVFPHVVAAVDYDSKMRSEVDSLGRSSTSSGNAGGLGVGTGVRYWFREDKYKAPQSYVDFSVQYREKVFGD
DRAEGVFARMTFSW

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72554; Mature: 72554

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS50293 TPR_REGION ; PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPFILSLLVTGLSLSSPFSQAETLPLPLTGPAYAIANEAYMAYNRKDYDLAIAKANEA
CCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHCCHHHEECCCCCEEEEHHHHHH
LRQRGDAQQLRDLITLAERDKYRRDHPQRAYKTRPQPGYLEGNRALRAYANRDYDGSASH
HHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCHHH
ARKAIAQAPKNLDYRMMLIEALQRQQRLDQAQAAINDAEQALGPQQVLTRRRQAIQEQVA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEA
HHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHE
LALNGNDATLLVQRGQMRQRLGDQDGARQDFAQAMAVGNLPLREQASLYAAMGQPSEALQ
EEECCCCEEEEEECHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
RLQKARDAGELQPGDEVQIAYFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRT
HHHHHHCCCCCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
SNDAQAIAYFKRVLDYQQTGDLQMPAQQVFDTRRAVSDLSREWGLTNTTTYRGASTSSGL
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC
SGAPGGSNDSVQNSTEVFWRPFGYRNARFVELYGRVTDTLWSKEGDSDTGADALQGALGI
CCCCCCCCCCCCCCCHHEECCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
RVKPFSAVNVIGAFERTFPLGNSNADGDWLVRLGYGSSIGTDLRVDVPSWWTSQLYAEGG
EECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHCC
RYLQDKRNYFNSEWQVGRSFRLDSISPRLVVFPHVVAAVDYDSKMRSEVDSLGRSSTSSG
HHHHHHHHHCCCCHHCCCCCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
NAGGLGVGTGVRYWFREDKYKAPQSYVDFSVQYREKVFGDDRAEGVFARMTFSW
CCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKRPFILSLLVTGLSLSSPFSQAETLPLPLTGPAYAIANEAYMAYNRKDYDLAIAKANEA
CCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHCCHHHEECCCCCEEEEHHHHHH
LRQRGDAQQLRDLITLAERDKYRRDHPQRAYKTRPQPGYLEGNRALRAYANRDYDGSASH
HHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCHHH
ARKAIAQAPKNLDYRMMLIEALQRQQRLDQAQAAINDAEQALGPQQVLTRRRQAIQEQVA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEA
HHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHE
LALNGNDATLLVQRGQMRQRLGDQDGARQDFAQAMAVGNLPLREQASLYAAMGQPSEALQ
EEECCCCEEEEEECHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
RLQKARDAGELQPGDEVQIAYFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRT
HHHHHHCCCCCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
SNDAQAIAYFKRVLDYQQTGDLQMPAQQVFDTRRAVSDLSREWGLTNTTTYRGASTSSGL
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC
SGAPGGSNDSVQNSTEVFWRPFGYRNARFVELYGRVTDTLWSKEGDSDTGADALQGALGI
CCCCCCCCCCCCCCCHHEECCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
RVKPFSAVNVIGAFERTFPLGNSNADGDWLVRLGYGSSIGTDLRVDVPSWWTSQLYAEGG
EECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHCC
RYLQDKRNYFNSEWQVGRSFRLDSISPRLVVFPHVVAAVDYDSKMRSEVDSLGRSSTSSG
HHHHHHHHHCCCCHHCCCCCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
NAGGLGVGTGVRYWFREDKYKAPQSYVDFSVQYREKVFGDDRAEGVFARMTFSW
CCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA