| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is cysZ [H]
Identifier: 66044268
GI number: 66044268
Start: 1148721
End: 1149482
Strand: Reverse
Name: cysZ [H]
Synonym: Psyr_1015
Alternate gene names: 66044268
Gene position: 1149482-1148721 (Counterclockwise)
Preceding gene: 79093591
Following gene: 66044267
Centisome position: 18.86
GC content: 60.76
Gene sequence:
>762_bases ATGCCCGCTCCCGCCCTTACCGGCCCGCAATACCTGAGAGAGGGCCTGAAACTGGTCCTCAGCCCAGGCTTGCGCTTGTT CGTTCTACTGCCATTGAGCATCAATGTGGTGTTGTTCTGCGGCCTGATCTATCTGGCGGTGCATCAGTTCGAGCTGTGGG TCGACACCTTCATGCCGACCCTGCCTCATTGGCTGAGCTTTCTCAGTTACATCCTCTGGCCACTGTTCGTGGCGCTGGTG CTGCTGATGGTGTTTTTCACCTTCACCGTAGTCGCCAACATCATCGCCGCGCCATTCAACGGGTTTCTGTCCGAAAAGGT CGAAGCCGTGGTTCGTGGCGTAGACGAATCGCCCGATTTCAGCTGGGCCGAACTGGTCGCCATGGTGCCCCGCACCCTGG CCCGCGAAGCACGCAAGCTGGGCTACATGTTGCCGCGCATGCTCGGCCTGTTCATCCTGTCGTTCATCCCGGTCGCCAAC ATCATCGCCGCCCCGCTGTGGCTATTGTTCGGGGTGTGGATGATGGCGATCCAGTACATCGACTACCCCGCCGACAACCA CAAACTGGGCTGGAACGAAATGCTCGGCTGGCTGAAGAGCAAACGCTGGCAGAGCCTGAGCTTCGGCGGCATCGTCTACG TTGCCTTGCTGATCCCGGTGGTCAACCTGCTGATGATGCCTGCTGCAGTGGCCGGTGCAACGCTGTTCTGGGTGCGCGAG CGCGGCGCGGATGCGTTGCCGGTGACTCACGCACGCGGCTGA
Upstream 100 bases:
>100_bases CGCCACAAGTCTGGCATGCTCAAAAACCGTCGGCGCTCAGCTCTTTCATGGCCATCACAAAGCCGGTAAGGTCACGCCTT TCAAGCACTCGGAGACTCCC
Downstream 100 bases:
>100_bases ATGGCGACATGCCGGACCGCGCCATGCGGTTCGGCACACCCGAAGAAAAAAATCACACACATATAAATATGCACCGCAAC TCAACCTGCCAGTTGGGGCT
Product: putative sulfate transport protein CysZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPAPALTGPQYLREGLKLVLSPGLRLFVLLPLSINVVLFCGLIYLAVHQFELWVDTFMPTLPHWLSFLSYILWPLFVALV LLMVFFTFTVVANIIAAPFNGFLSEKVEAVVRGVDESPDFSWAELVAMVPRTLAREARKLGYMLPRMLGLFILSFIPVAN IIAAPLWLLFGVWMMAIQYIDYPADNHKLGWNEMLGWLKSKRWQSLSFGGIVYVALLIPVVNLLMMPAAVAGATLFWVRE RGADALPVTHARG
Sequences:
>Translated_253_residues MPAPALTGPQYLREGLKLVLSPGLRLFVLLPLSINVVLFCGLIYLAVHQFELWVDTFMPTLPHWLSFLSYILWPLFVALV LLMVFFTFTVVANIIAAPFNGFLSEKVEAVVRGVDESPDFSWAELVAMVPRTLAREARKLGYMLPRMLGLFILSFIPVAN IIAAPLWLLFGVWMMAIQYIDYPADNHKLGWNEMLGWLKSKRWQSLSFGGIVYVALLIPVVNLLMMPAAVAGATLFWVRE RGADALPVTHARG >Mature_252_residues PAPALTGPQYLREGLKLVLSPGLRLFVLLPLSINVVLFCGLIYLAVHQFELWVDTFMPTLPHWLSFLSYILWPLFVALVL LMVFFTFTVVANIIAAPFNGFLSEKVEAVVRGVDESPDFSWAELVAMVPRTLAREARKLGYMLPRMLGLFILSFIPVANI IAAPLWLLFGVWMMAIQYIDYPADNHKLGWNEMLGWLKSKRWQSLSFGGIVYVALLIPVVNLLMMPAAVAGATLFWVRER GADALPVTHARG
Specific function: Possibly involved in sulfate transport [H]
COG id: COG2981
COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CysZ family [H]
Homologues:
Organism=Escherichia coli, GI1788753, Length=241, Percent_Identity=43.5684647302905, Blast_Score=193, Evalue=8e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022985 - InterPro: IPR007496 [H]
Pfam domain/function: PF04401 DUF540 [H]
EC number: NA
Molecular weight: Translated: 28389; Mature: 28258
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPALTGPQYLREGLKLVLSPGLRLFVLLPLSINVVLFCGLIYLAVHQFELWVDTFMPT CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPHWLSFLSYILWPLFVALVLLMVFFTFTVVANIIAAPFNGFLSEKVEAVVRGVDESPDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SWAELVAMVPRTLAREARKLGYMLPRMLGLFILSFIPVANIIAAPLWLLFGVWMMAIQYI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYPADNHKLGWNEMLGWLKSKRWQSLSFGGIVYVALLIPVVNLLMMPAAVAGATLFWVRE CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGADALPVTHARG CCCCCCCCCCCCC >Mature Secondary Structure PAPALTGPQYLREGLKLVLSPGLRLFVLLPLSINVVLFCGLIYLAVHQFELWVDTFMPT CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPHWLSFLSYILWPLFVALVLLMVFFTFTVVANIIAAPFNGFLSEKVEAVVRGVDESPDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SWAELVAMVPRTLAREARKLGYMLPRMLGLFILSFIPVANIIAAPLWLLFGVWMMAIQYI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYPADNHKLGWNEMLGWLKSKRWQSLSFGGIVYVALLIPVVNLLMMPAAVAGATLFWVRE CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGADALPVTHARG CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]