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The map label for this gene is rutA [H]

Identifier: 66044252

GI number: 66044252

Start: 1132388

End: 1133470

Strand: Reverse

Name: rutA [H]

Synonym: Psyr_0999

Alternate gene names: 66044252

Gene position: 1133470-1132388 (Counterclockwise)

Preceding gene: 66044259

Following gene: 66044251

Centisome position: 18.6

GC content: 61.03

Gene sequence:

>1083_bases
ATGGACATTGGAATCTTCATCCCCATCGGCAATAACGGCTGGCTGATTTCCAGCAATGCTCCGCAGTACATGCCGACCTT
CGAGCTGAACAAACAGATCGTGCAGAAGGCCGAGGGCTATGGCTTCGACTTTGCGCTGTCGATGATCAAACTGCGTGGCT
TCGGCGGCAAGACGCAGTTCTGGGAACACAACCTGGAGTCGTTCACGCTGATGGCCGGCCTGGCCGCAGTCACCAGCCGG
ATCCAGCTGTTCGCCACCGTTGCCACTCTGACCATCCCGCCCGCCATTGCCGCGCGCATGGCCTCGACCATCGACTCGAT
CTCCAATGGCCGCTTCGGGATCAACCTCGTCACCGGCTGGCAGAAGCCGGAATACGAGCAGATGGGACTGTGGCCGGGCG
ACGAGTTCTTCCACACCCGCTATGAATACCTGGCCGAGTACGCTCAGGTTCTGCGCGACCTGTGGGCCACCGGCAGCAGC
GACTTCAAGGGCGAACATTTCAGCATGCAGGACTGCCGCGTCAGCCCTCGCCCACAGGCCGACATGAAGCTGATCTGCGC
CGGTCAAAGTGAAGCGGGCATGGCGTTCTCGGCGCAATACGCCGACTACAACTTCTGCTTCGGCAAAGGCGTCAACACGC
CCACGGCCTTCGCGCCGACCGCACAGAAACTGCTCGAAGCCAATGAAAAGACCGGCCGCAATGTCACCTCCTGCGTGCTG
TTCATGATCATCGCCGACGATACCGACGAAGCCGCACGCGCTCGCTGGGAGCACATCAAGGACGGTGCCGACGAAGAAGC
CATTGCCTGGCTGAGCGAAAAAGGCTCGGCGGATAAAAGTGCCGGCTCCAACCTGCGACAGATGGCCGACCCGACCTCGG
CGGTCAACATCAACATGGGCACGCTGGTGGGCTCGTGGGCCACGGTGGCGAGAATGCTCGACGAGGTGGCCAGTGTGCCG
GGGACTCAGGGCGTGATGCTGACGTTCGATGATTTCGTCAAAGGGGTCGAGGATTTCGGCGAGAAGATCCAGCCACTGAT
GACCAGCCGCAAGCACATCGCGCAGCTCAAGGAGGTGGTCTGA

Upstream 100 bases:

>100_bases
GCCCGCTTAATGCAAAAGCTTATTGAGAGACGATTGAAAGGCGATTCAAGTGCCGCCAGTCGCGCTTTGGCACGCATCGA
CCCACGCAGAGAGGCCTCAT

Downstream 100 bases:

>100_bases
TGACAACCCCGACAACCGTCGCAGGCGTTGACCTGCCGGACCTGCAGCCCGCCCGCGAGCTGCCCGCCCGTCCCGAGCCG
CTGCGCATGAAACCCGGCGA

Product: luciferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MDIGIFIPIGNNGWLISSNAPQYMPTFELNKQIVQKAEGYGFDFALSMIKLRGFGGKTQFWEHNLESFTLMAGLAAVTSR
IQLFATVATLTIPPAIAARMASTIDSISNGRFGINLVTGWQKPEYEQMGLWPGDEFFHTRYEYLAEYAQVLRDLWATGSS
DFKGEHFSMQDCRVSPRPQADMKLICAGQSEAGMAFSAQYADYNFCFGKGVNTPTAFAPTAQKLLEANEKTGRNVTSCVL
FMIIADDTDEAARARWEHIKDGADEEAIAWLSEKGSADKSAGSNLRQMADPTSAVNINMGTLVGSWATVARMLDEVASVP
GTQGVMLTFDDFVKGVEDFGEKIQPLMTSRKHIAQLKEVV

Sequences:

>Translated_360_residues
MDIGIFIPIGNNGWLISSNAPQYMPTFELNKQIVQKAEGYGFDFALSMIKLRGFGGKTQFWEHNLESFTLMAGLAAVTSR
IQLFATVATLTIPPAIAARMASTIDSISNGRFGINLVTGWQKPEYEQMGLWPGDEFFHTRYEYLAEYAQVLRDLWATGSS
DFKGEHFSMQDCRVSPRPQADMKLICAGQSEAGMAFSAQYADYNFCFGKGVNTPTAFAPTAQKLLEANEKTGRNVTSCVL
FMIIADDTDEAARARWEHIKDGADEEAIAWLSEKGSADKSAGSNLRQMADPTSAVNINMGTLVGSWATVARMLDEVASVP
GTQGVMLTFDDFVKGVEDFGEKIQPLMTSRKHIAQLKEVV
>Mature_360_residues
MDIGIFIPIGNNGWLISSNAPQYMPTFELNKQIVQKAEGYGFDFALSMIKLRGFGGKTQFWEHNLESFTLMAGLAAVTSR
IQLFATVATLTIPPAIAARMASTIDSISNGRFGINLVTGWQKPEYEQMGLWPGDEFFHTRYEYLAEYAQVLRDLWATGSS
DFKGEHFSMQDCRVSPRPQADMKLICAGQSEAGMAFSAQYADYNFCFGKGVNTPTAFAPTAQKLLEANEKTGRNVTSCVL
FMIIADDTDEAARARWEHIKDGADEEAIAWLSEKGSADKSAGSNLRQMADPTSAVNINMGTLVGSWATVARMLDEVASVP
GTQGVMLTFDDFVKGVEDFGEKIQPLMTSRKHIAQLKEVV

Specific function: Catalyzes the pyrimidine ring opening between N-3 and C- 4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product wh

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family. RutA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=362, Percent_Identity=75.414364640884, Blast_Score=595, Evalue=1e-171,
Organism=Escherichia coli, GI1787166, Length=307, Percent_Identity=25.0814332247557, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR019914
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 39585; Mature: 39585

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIGIFIPIGNNGWLISSNAPQYMPTFELNKQIVQKAEGYGFDFALSMIKLRGFGGKTQF
CCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHH
WEHNLESFTLMAGLAAVTSRIQLFATVATLTIPPAIAARMASTIDSISNGRFGINLVTGW
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECC
QKPEYEQMGLWPGDEFFHTRYEYLAEYAQVLRDLWATGSSDFKGEHFSMQDCRVSPRPQA
CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCC
DMKLICAGQSEAGMAFSAQYADYNFCFGKGVNTPTAFAPTAQKLLEANEKTGRNVTSCVL
CEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHEEE
FMIIADDTDEAARARWEHIKDGADEEAIAWLSEKGSADKSAGSNLRQMADPTSAVNINMG
EEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCHHHHHCCCCCEEEEEHH
TLVGSWATVARMLDEVASVPGTQGVMLTFDDFVKGVEDFGEKIQPLMTSRKHIAQLKEVV
HHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDIGIFIPIGNNGWLISSNAPQYMPTFELNKQIVQKAEGYGFDFALSMIKLRGFGGKTQF
CCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHH
WEHNLESFTLMAGLAAVTSRIQLFATVATLTIPPAIAARMASTIDSISNGRFGINLVTGW
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECC
QKPEYEQMGLWPGDEFFHTRYEYLAEYAQVLRDLWATGSSDFKGEHFSMQDCRVSPRPQA
CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCC
DMKLICAGQSEAGMAFSAQYADYNFCFGKGVNTPTAFAPTAQKLLEANEKTGRNVTSCVL
CEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHEEE
FMIIADDTDEAARARWEHIKDGADEEAIAWLSEKGSADKSAGSNLRQMADPTSAVNINMG
EEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCHHHHHCCCCCEEEEEHH
TLVGSWATVARMLDEVASVPGTQGVMLTFDDFVKGVEDFGEKIQPLMTSRKHIAQLKEVV
HHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA