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The map label for this gene is rpfG [H]

Identifier: 66044247

GI number: 66044247

Start: 1128435

End: 1129616

Strand: Reverse

Name: rpfG [H]

Synonym: Psyr_0994

Alternate gene names: 66044247

Gene position: 1129616-1128435 (Counterclockwise)

Preceding gene: 66044248

Following gene: 66044239

Centisome position: 18.54

GC content: 60.41

Gene sequence:

>1182_bases
ATGCTGAAGAAAATACCGGTGGCTGATCTTGCCCTGGGCATGTATATCCACAAAATCTGCCGCCGCTGGACCAATGACCC
ATTCTGGATAGGCCTGGTCGAAGTCATGCTCGATGACGTTGAAGTGCTCGAGCGCATTCAGCAATCAGGTACCAAAGAAG
TCTGGATCGAAACCGGCAAAAGCCGCGTCCTGGCCCCCCGGCCCTCAACGCCATCGGCCAGCGACGATACAACGCCGGCC
AGCCTCGAAAAGGAAATGCTGCGCGCCAGGCTGATCTGCGGACGGGCCAGAGATGCGGTCATGTGCATGTTTACCGAAGC
GCGCATGGGCCGGGCCATGGATGTCGACAATGTGCAGTTGCTGGTGGAGGAAATCTCCAACTCGATCCTGCGCCATCCGC
ACGCGCTGATCAGCCTGTCACGCCTGAAGACGTCCGACGAGTACACCTACATGCACTCGGTGGCGGTCTGCGCGTTGATG
GTCGCGCTGGCCAAACGCATGGGCATGCCTGACGATCAGGTCCGTGAGGCTGGCGTGGCCGGGCTGATGCACGATGTCGG
CAAAATGATGATTGCCCCGGCGGTGCTCAACAAACCGGGCCGCCTGACCCGCGACGAATTCGAGATCATGAAGGCCCACC
CCGAACTGGGCGTGAAGATCCTCATGGACACGCAGCCCGTGGCCGCGTCGGTGATTGACGTCTGCCTGCATCACCACGAA
AAGGTCGACGGCTCGGGCTACCCGCACGGCCTGAAAGGCGACCAGATCAGCATCTTCGCGCGCATGGGCGCGGTCTGCGA
CGTGTATGACGCCATCACCTCCGACCGCCCCTACAAAAAGGGCTGGGGCGTTGCCCATTCGATTCGCGAGATGGCGTCGT
GGCAGGGACATTTTGACGACGTGGTGTTTCAAAGCTTCGTCAAGACCGTGGGTATTTACCCGATCGGCACACTGGTACGC
CTGGAAAGCGGGCGCCTCGGCGTGGTGGTCGAACAAGGTCAAGCGTCGCTGTTGAAACCGAAAGTGAAGGTTTTCATGTC
AGCGCGCACCGGCAAGACGTTCGCCGCACAAGTCATCGACCTGGACTGCCCTTCCGACCCGGACAGGATCGCCAGAATCG
AAAAAACCACCGATTGGGGGCTGGAAGAAGTTGATACGCTGTGGGCGGGCAGCCCGGCCTGA

Upstream 100 bases:

>100_bases
TCAACAGCGCCTGCATTCTGCTGATAGCCGCCAGCAGTCCATCGTATGCTCGTTGCGCTTACCCGCCACCTGGCATGCCT
ACGCACGCAGGTGGCTGAGC

Downstream 100 bases:

>100_bases
GTGGCCCGGTGAACGCCGTTGACGTCAACCCAGCAAGCCCAGTGTCTTGGCCCGCGCCACCGCTTGAGTGCGACGCTCGA
CCCCCAGTTTGCTGTTGATG

Product: metal-dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MLKKIPVADLALGMYIHKICRRWTNDPFWIGLVEVMLDDVEVLERIQQSGTKEVWIETGKSRVLAPRPSTPSASDDTTPA
SLEKEMLRARLICGRARDAVMCMFTEARMGRAMDVDNVQLLVEEISNSILRHPHALISLSRLKTSDEYTYMHSVAVCALM
VALAKRMGMPDDQVREAGVAGLMHDVGKMMIAPAVLNKPGRLTRDEFEIMKAHPELGVKILMDTQPVAASVIDVCLHHHE
KVDGSGYPHGLKGDQISIFARMGAVCDVYDAITSDRPYKKGWGVAHSIREMASWQGHFDDVVFQSFVKTVGIYPIGTLVR
LESGRLGVVVEQGQASLLKPKVKVFMSARTGKTFAAQVIDLDCPSDPDRIARIEKTTDWGLEEVDTLWAGSPA

Sequences:

>Translated_393_residues
MLKKIPVADLALGMYIHKICRRWTNDPFWIGLVEVMLDDVEVLERIQQSGTKEVWIETGKSRVLAPRPSTPSASDDTTPA
SLEKEMLRARLICGRARDAVMCMFTEARMGRAMDVDNVQLLVEEISNSILRHPHALISLSRLKTSDEYTYMHSVAVCALM
VALAKRMGMPDDQVREAGVAGLMHDVGKMMIAPAVLNKPGRLTRDEFEIMKAHPELGVKILMDTQPVAASVIDVCLHHHE
KVDGSGYPHGLKGDQISIFARMGAVCDVYDAITSDRPYKKGWGVAHSIREMASWQGHFDDVVFQSFVKTVGIYPIGTLVR
LESGRLGVVVEQGQASLLKPKVKVFMSARTGKTFAAQVIDLDCPSDPDRIARIEKTTDWGLEEVDTLWAGSPA
>Mature_393_residues
MLKKIPVADLALGMYIHKICRRWTNDPFWIGLVEVMLDDVEVLERIQQSGTKEVWIETGKSRVLAPRPSTPSASDDTTPA
SLEKEMLRARLICGRARDAVMCMFTEARMGRAMDVDNVQLLVEEISNSILRHPHALISLSRLKTSDEYTYMHSVAVCALM
VALAKRMGMPDDQVREAGVAGLMHDVGKMMIAPAVLNKPGRLTRDEFEIMKAHPELGVKILMDTQPVAASVIDVCLHHHE
KVDGSGYPHGLKGDQISIFARMGAVCDVYDAITSDRPYKKGWGVAHSIREMASWQGHFDDVVFQSFVKTVGIYPIGTLVR
LESGRLGVVVEQGQASLLKPKVKVFMSARTGKTFAAQVIDLDCPSDPDRIARIEKTTDWGLEEVDTLWAGSPA

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 43523; Mature: 43523

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKIPVADLALGMYIHKICRRWTNDPFWIGLVEVMLDDVEVLERIQQSGTKEVWIETGK
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
SRVLAPRPSTPSASDDTTPASLEKEMLRARLICGRARDAVMCMFTEARMGRAMDVDNVQL
CEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCHHHHHH
LVEEISNSILRHPHALISLSRLKTSDEYTYMHSVAVCALMVALAKRMGMPDDQVREAGVA
HHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GLMHDVGKMMIAPAVLNKPGRLTRDEFEIMKAHPELGVKILMDTQPVAASVIDVCLHHHE
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
KVDGSGYPHGLKGDQISIFARMGAVCDVYDAITSDRPYKKGWGVAHSIREMASWQGHFDD
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHH
VVFQSFVKTVGIYPIGTLVRLESGRLGVVVEQGQASLLKPKVKVFMSARTGKTFAAQVID
HHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCHHHHCHHHHHEEECCCCCEEEEEEEE
LDCPSDPDRIARIEKTTDWGLEEVDTLWAGSPA
CCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MLKKIPVADLALGMYIHKICRRWTNDPFWIGLVEVMLDDVEVLERIQQSGTKEVWIETGK
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
SRVLAPRPSTPSASDDTTPASLEKEMLRARLICGRARDAVMCMFTEARMGRAMDVDNVQL
CEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCHHHHHH
LVEEISNSILRHPHALISLSRLKTSDEYTYMHSVAVCALMVALAKRMGMPDDQVREAGVA
HHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GLMHDVGKMMIAPAVLNKPGRLTRDEFEIMKAHPELGVKILMDTQPVAASVIDVCLHHHE
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
KVDGSGYPHGLKGDQISIFARMGAVCDVYDAITSDRPYKKGWGVAHSIREMASWQGHFDD
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHH
VVFQSFVKTVGIYPIGTLVRLESGRLGVVVEQGQASLLKPKVKVFMSARTGKTFAAQVID
HHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCHHHHCHHHHHEEECCCCCEEEEEEEE
LDCPSDPDRIARIEKTTDWGLEEVDTLWAGSPA
CCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]