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The map label for this gene is rsmC [H]

Identifier: 66044239

GI number: 66044239

Start: 1116474

End: 1117472

Strand: Reverse

Name: rsmC [H]

Synonym: Psyr_0986

Alternate gene names: 66044239

Gene position: 1117472-1116474 (Counterclockwise)

Preceding gene: 66044247

Following gene: 66044238

Centisome position: 18.34

GC content: 62.56

Gene sequence:

>999_bases
ATGGACCCGCGCAGTGAAGTGTTACTCCGTCAGGCCGAGCTGTTTCAGGGCTCGCTGTTGTTGGTCGGGCTGCCCGCCGA
TGACCTGCTCGGAAAACTGCCGGATGCACGTGGTTGGTGCTGGCACGCCGGTGATCAGGCGGCCCTGGATGCGCGTTTTG
AAGGGCGCGTGGATTTCGGCGTCGAGGCGCCACAGACTGGCTTCGAAGCCGCCGTGCTGTTCCTGCCCAAGGCACGTGAT
CTGACCGACTACCTGCTCAATGCACTGGCCTCGCGACTGGCCGGACGCGAGCTGTTTCTGGTCGGCGAGAAACGTGGTGG
CATCGAAGCGGCTGCCAAGCAACTGAGCCCGTTCGGCCGCGCGCGCAAGCTGGACAGCGCCCGCCACTGCCAACTGTGGC
AGGTCACCGTCGAGCACGCACCGCAAGCCGTCAGCCTGGACAGCCTCGCCAGGCCCTACCAGATCGAATTGCAGGACGGC
CCGCTCACCGTCGTCAGCCTGCCCGGTGTGTTCAGCCATGGCCGGCTCGACCGTGGTTCAGCCTTGTTGCTGGAAAACAT
TGACAAGCTGCCCAGCGGCAACCTGCTCGATTTCGGTTGCGGCGCCGGCGTGCTGGGCGCGGCGATCAAGCGTCGTTACC
CGCATAACGAAGTCATCATGCTCGATGTCGATGCCTTCGCCACCGCCAGTTCGCGCCTGACCCTTGCCGCCAATGGCCTG
CAAGCCCAGGTGCTGACCGGTGACGGCATCGACGCAGCCCCGATGGGCTTGAACACGATTCTGAGCAATCCGCCGTTCCA
CGTCGGGGTTCATACCGATTACATGGCAACGGAAAACCTGCTGAGAAAAGCACGCCAACATCTTAAATCAGGTGGCGAAC
TGCGCCTGGTCGCGAATAACTTCCTGCGTTATCAGCCGCTGATCGAGGAGCATGTCGGGCAGTGCGAAGTCAGGGCTCAG
GGTAACGGTTTCAAAATCTACAGCGCCAAACGCCCCTGA

Upstream 100 bases:

>100_bases
CCACTATCGTGCGACGCTCCGCGTCGCATGCTGTTCCGGACGCTCCGCGTCCTCCCGGCCCATATCCTGTTAGACTGCGC
GCTTTTTCAGGAGCCATTCC

Downstream 100 bases:

>100_bases
AATAAGCACTTGCCGAAACGTTTTCGCGGAGGCAGAATCCGCTCCGTCCTAGGGGAGTAGTCTCCCACGAGCGCCATGCT
CGTCCGGCACGTATCAACAT

Product: rRNA (guanine-N(2)-)-methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MDPRSEVLLRQAELFQGSLLLVGLPADDLLGKLPDARGWCWHAGDQAALDARFEGRVDFGVEAPQTGFEAAVLFLPKARD
LTDYLLNALASRLAGRELFLVGEKRGGIEAAAKQLSPFGRARKLDSARHCQLWQVTVEHAPQAVSLDSLARPYQIELQDG
PLTVVSLPGVFSHGRLDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLAANGL
QAQVLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATENLLRKARQHLKSGGELRLVANNFLRYQPLIEEHVGQCEVRAQ
GNGFKIYSAKRP

Sequences:

>Translated_332_residues
MDPRSEVLLRQAELFQGSLLLVGLPADDLLGKLPDARGWCWHAGDQAALDARFEGRVDFGVEAPQTGFEAAVLFLPKARD
LTDYLLNALASRLAGRELFLVGEKRGGIEAAAKQLSPFGRARKLDSARHCQLWQVTVEHAPQAVSLDSLARPYQIELQDG
PLTVVSLPGVFSHGRLDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLAANGL
QAQVLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATENLLRKARQHLKSGGELRLVANNFLRYQPLIEEHVGQCEVRAQ
GNGFKIYSAKRP
>Mature_332_residues
MDPRSEVLLRQAELFQGSLLLVGLPADDLLGKLPDARGWCWHAGDQAALDARFEGRVDFGVEAPQTGFEAAVLFLPKARD
LTDYLLNALASRLAGRELFLVGEKRGGIEAAAKQLSPFGRARKLDSARHCQLWQVTVEHAPQAVSLDSLARPYQIELQDG
PLTVVSLPGVFSHGRLDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLAANGL
QAQVLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATENLLRKARQHLKSGGELRLVANNFLRYQPLIEEHVGQCEVRAQ
GNGFKIYSAKRP

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=334, Percent_Identity=37.4251497005988, Blast_Score=184, Evalue=8e-48,
Organism=Escherichia coli, GI87082206, Length=270, Percent_Identity=28.8888888888889, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 36013; Mature: 36013

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPRSEVLLRQAELFQGSLLLVGLPADDLLGKLPDARGWCWHAGDQAALDARFEGRVDFG
CCCHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCEEECCCCCEECCEECCCEECC
VEAPQTGFEAAVLFLPKARDLTDYLLNALASRLAGRELFLVGEKRGGIEAAAKQLSPFGR
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCHHHH
ARKLDSARHCQLWQVTVEHAPQAVSLDSLARPYQIELQDGPLTVVSLPGVFSHGRLDRGS
HHHCCCCCCCEEEEEEHHCCCCEECHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCC
ALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLAANGL
CHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEECHHHHCCCCCEEEEECCC
QAQVLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATENLLRKARQHLKSGGELRLVANN
EEEEEECCCCCCCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECC
FLRYQPLIEEHVGQCEVRAQGNGFKIYSAKRP
CHHHCCHHHHCCCCEEEEECCCCEEEEECCCC
>Mature Secondary Structure
MDPRSEVLLRQAELFQGSLLLVGLPADDLLGKLPDARGWCWHAGDQAALDARFEGRVDFG
CCCHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCEEECCCCCEECCEECCCEECC
VEAPQTGFEAAVLFLPKARDLTDYLLNALASRLAGRELFLVGEKRGGIEAAAKQLSPFGR
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCHHHH
ARKLDSARHCQLWQVTVEHAPQAVSLDSLARPYQIELQDGPLTVVSLPGVFSHGRLDRGS
HHHCCCCCCCEEEEEEHHCCCCEECHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCC
ALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLAANGL
CHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEECHHHHCCCCCEEEEECCC
QAQVLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATENLLRKARQHLKSGGELRLVANN
EEEEEECCCCCCCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECC
FLRYQPLIEEHVGQCEVRAQGNGFKIYSAKRP
CHHHCCHHHHCCCCEEEEECCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA