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The map label for this gene is rfbU [H]

Identifier: 66044191

GI number: 66044191

Start: 1071372

End: 1072520

Strand: Reverse

Name: rfbU [H]

Synonym: Psyr_0936

Alternate gene names: 66044191

Gene position: 1072520-1071372 (Counterclockwise)

Preceding gene: 66044194

Following gene: 66044187

Centisome position: 17.6

GC content: 57.79

Gene sequence:

>1149_bases
ATGGATATAGGCTTGAGTTGTACGGTCTGGGCGAAAGGCGAACGTGCCGGGCATCTGGACGGTATCGGCATATATTCCAG
AGCGCTTTGGCACAGCCTGACCAAGCTGAGTCAGGCTGACGATATCCACGTCAAACCTTACGCTTTCGGCAAGCAACTGC
CAGTCCTGGCCTGTGGTCAACCGCAACAGTTGTCCAGCGACTACCGTATTCATGCCATGCTCAGTGGCGTCCTAAAACTG
CCATTGGGTAGCTCAGCAAGCATCGCCAAAGACGTTCAGCTGTTCCATGCCACGGATCACCATGTCCCACGAATCAAAGG
CGTACCTGTCGTGGCCACGATCATGGACATGATTCCGATATTACACCCGGAATGGATCAAGCAAGACCTCAAGCGCCTGA
AAAGCTGGCTGTTCACAACCAGCATTAAACGTGCCGATCACATCATCACCATCTCCGAATACAGCAAGCAGGACATGATT
AGCCACCTGGGCATTGCGCCAGAGCGCATCAGCGTCACGCCCCTGGGCGTGGACCCTGTGTATTTCGAGCGCGTCGGCGC
CGCCGAGCGCAACAGGGTGCTGGACACGTATGGCCTCAAACCGGGCTTCTTTCTGGTAGTAGGCACCCTGCAACCCCGCA
AGAACCTGCAACGTGTGCTTGAAGCCTTCCAGCAACTGCCAGCACTGGTACGCAAAGAGCATCCGCTGGTGATTGTCGGC
CGCAACGGCTGGAGTAACGACGAACTGCTCCCGCAGCTTGAGGCATTGCAGCAACGTGGCGAAGGTCGCTGGCTGAGTTA
TCTGCCACAAAATAAGGTGCTAGCGCTGCTGCAAAGTGCCGGAGCGCTGGTGTTTGCTTCGCTGTACGAGGGGTTCGGCC
TGCCAGCCATCGAGGCGTTCGCGGCCCAGTGCCCGCTGATCGCGTCCAACAATTCTTCACTGCCGGAAGTGACAGGCGAT
GCCGCCTGGGCTGTCGACCCGCACAGTGCAGAAAGCATCAGCACTGCAATGCTCGCCGTCCTGGAACAGCCTGAAGAACG
TGAGCGCAAGGTTCAGTCAGGGCTGGGGCGTGCGCGTCATTTCAGTTGGGATGCCTGTGCGCAGAGCACGCTGGATATCT
ACCGCAAGGTGCTGGCGACTCATCGCTAG

Upstream 100 bases:

>100_bases
CGCGCCCGATTCCGCATATCCGCCACACGCAAGCGTAATACGCTGCCTTGGTACACCATTGAGAAGTGATGTAATTGATC
GACATTGAGAACGACAGAAC

Downstream 100 bases:

>100_bases
AAGAGACGCCGGGCACAAGCCTGAAGCGCGCCGCAGGTGCTATCGGGGCGTCTTTTTCAAGGCCGAGTCCGCAGCCTTCT
CGACTGCCGGATTGGTACCA

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MDIGLSCTVWAKGERAGHLDGIGIYSRALWHSLTKLSQADDIHVKPYAFGKQLPVLACGQPQQLSSDYRIHAMLSGVLKL
PLGSSASIAKDVQLFHATDHHVPRIKGVPVVATIMDMIPILHPEWIKQDLKRLKSWLFTTSIKRADHIITISEYSKQDMI
SHLGIAPERISVTPLGVDPVYFERVGAAERNRVLDTYGLKPGFFLVVGTLQPRKNLQRVLEAFQQLPALVRKEHPLVIVG
RNGWSNDELLPQLEALQQRGEGRWLSYLPQNKVLALLQSAGALVFASLYEGFGLPAIEAFAAQCPLIASNNSSLPEVTGD
AAWAVDPHSAESISTAMLAVLEQPEERERKVQSGLGRARHFSWDACAQSTLDIYRKVLATHR

Sequences:

>Translated_382_residues
MDIGLSCTVWAKGERAGHLDGIGIYSRALWHSLTKLSQADDIHVKPYAFGKQLPVLACGQPQQLSSDYRIHAMLSGVLKL
PLGSSASIAKDVQLFHATDHHVPRIKGVPVVATIMDMIPILHPEWIKQDLKRLKSWLFTTSIKRADHIITISEYSKQDMI
SHLGIAPERISVTPLGVDPVYFERVGAAERNRVLDTYGLKPGFFLVVGTLQPRKNLQRVLEAFQQLPALVRKEHPLVIVG
RNGWSNDELLPQLEALQQRGEGRWLSYLPQNKVLALLQSAGALVFASLYEGFGLPAIEAFAAQCPLIASNNSSLPEVTGD
AAWAVDPHSAESISTAMLAVLEQPEERERKVQSGLGRARHFSWDACAQSTLDIYRKVLATHR
>Mature_382_residues
MDIGLSCTVWAKGERAGHLDGIGIYSRALWHSLTKLSQADDIHVKPYAFGKQLPVLACGQPQQLSSDYRIHAMLSGVLKL
PLGSSASIAKDVQLFHATDHHVPRIKGVPVVATIMDMIPILHPEWIKQDLKRLKSWLFTTSIKRADHIITISEYSKQDMI
SHLGIAPERISVTPLGVDPVYFERVGAAERNRVLDTYGLKPGFFLVVGTLQPRKNLQRVLEAFQQLPALVRKEHPLVIVG
RNGWSNDELLPQLEALQQRGEGRWLSYLPQNKVLALLQSAGALVFASLYEGFGLPAIEAFAAQCPLIASNNSSLPEVTGD
AAWAVDPHSAESISTAMLAVLEQPEERERKVQSGLGRARHFSWDACAQSTLDIYRKVLATHR

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 42261; Mature: 42261

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIGLSCTVWAKGERAGHLDGIGIYSRALWHSLTKLSQADDIHVKPYAFGKQLPVLACGQ
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEECCC
PQQLSSDYRIHAMLSGVLKLPLGSSASIAKDVQLFHATDHHVPRIKGVPVVATIMDMIPI
CHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC
LHPEWIKQDLKRLKSWLFTTSIKRADHIITISEYSKQDMISHLGIAPERISVTPLGVDPV
CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCHH
YFERVGAAERNRVLDTYGLKPGFFLVVGTLQPRKNLQRVLEAFQQLPALVRKEHPLVIVG
HHHHHCCHHHCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
RNGWSNDELLPQLEALQQRGEGRWLSYLPQNKVLALLQSAGALVFASLYEGFGLPAIEAF
CCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHH
AAQCPLIASNNSSLPEVTGDAAWAVDPHSAESISTAMLAVLEQPEERERKVQSGLGRARH
HHCCCEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHC
FSWDACAQSTLDIYRKVLATHR
CCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIGLSCTVWAKGERAGHLDGIGIYSRALWHSLTKLSQADDIHVKPYAFGKQLPVLACGQ
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEECCC
PQQLSSDYRIHAMLSGVLKLPLGSSASIAKDVQLFHATDHHVPRIKGVPVVATIMDMIPI
CHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC
LHPEWIKQDLKRLKSWLFTTSIKRADHIITISEYSKQDMISHLGIAPERISVTPLGVDPV
CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCHH
YFERVGAAERNRVLDTYGLKPGFFLVVGTLQPRKNLQRVLEAFQQLPALVRKEHPLVIVG
HHHHHCCHHHCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
RNGWSNDELLPQLEALQQRGEGRWLSYLPQNKVLALLQSAGALVFASLYEGFGLPAIEAF
CCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHH
AAQCPLIASNNSSLPEVTGDAAWAVDPHSAESISTAMLAVLEQPEERERKVQSGLGRARH
HHCCCEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHC
FSWDACAQSTLDIYRKVLATHR
CCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]