| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044183
Identifier: 66044183
GI number: 66044183
Start: 1055655
End: 1057292
Strand: Reverse
Name: 66044183
Synonym: Psyr_0928
Alternate gene names: NA
Gene position: 1057292-1055655 (Counterclockwise)
Preceding gene: 66044184
Following gene: 66044182
Centisome position: 17.35
GC content: 42.25
Gene sequence:
>1638_bases GTGAATGGGATATTCAAATCCAAAAACTTCCCATTCCAGCTAAAAGACAACAAAATTGTTTCAAATGACAATCAAAACAC TCAAGCCTCAATCGTCAAGAGCAAAAAACTAAGAATTGTAGACTGCGCTACGTCCGGCAATATGGCTAGCCTGCTGACTG TATCCGAACATAGCTATGCAAACCTGGAACTAATAATATCAAACGATTCGGAGTTTACATCTACATCCGCTACGAGCCGT ACCGAAGCAGGCAAAGATATTTACACTGGCCTTGCTGATAGCTACCTCACCCAAGGCCTTCACCTATTCATATTTGAATT CGATAAAAAACACATTGAAAAAAATGCTGAATTGACATTCAGCGAACGAGGCAAACCCGTAGACTTACAATACGTCTACG GAGATATCCCATGCTACAACCTATTAAATCATAAAACTTCAGGACTCTATCCGCGCATAGAAAAAAACACTTTACACCTG CAAAACAAAGAGCAATCCATTATTTCAATAATGCTCTCGAACAGCTACAGCCAGGCTGACAAATCCCTGTACGCCTCGAT CATTAACAACGAAATACAAGCCAAGTACAGCCTTTACTCAGAGCGAGCGTCACTGACAGGCGATAATGCCTATGAAGCGT TTAAATACGCTTTGAAGTCCGACGACTCTTGTTTTTATATTACAAGCAAGGAAGTCGTTGATCGTGAAAAGGATGAGTAC ATAAAAAAACACTTAGCCATTCTAGGTTCAACCCAGCATAAGGAGCTTTTCTTGAATGCAAAATCTCTTTTCTGCTCCTT TGGCTTTCCCGGCATTATTTTCCCCGAACTCAAAGACATACATATCAGCGCACTCAAATACAAGCTCTACCTTATGTGGC ACGGCGTTTCCGCTGGCGACAAAGACTCTTATGAAATAGCATCCTACAACGGCAACCGCAATGATGGAATTTTCGCCTGT TCCACCTATGAAGAAAGAAACTTTAAGCTTCTTGGTCATGACACTATCTATCTCGGCGGATACCCCAGAATGGATAAGTG GTGCAATGACGTACCGCTGAATGTTAACGCTGCGGTCATATTTTTCACATGGCGGCGAAATCTTTACGAAGCGACGCTTG CAGAGTTCTTGAGCTCTGATTATGTCACAACCATTGTAGAACTTGTAAAAGCGATAGCCAAGAGCCGCCCCAAGCTGGAG CTATACTATTTTATTCACAACTCTATTCCTGCTCAACACGTAGAGTGCCTGGCAGCTATTCTCAGAGCACACAGTAGCAA CATTCGCTTTGTGAACAACAATGACACGCATACGTTCAACCACATTTTCAACACGTCACAATATCTCATTACTGATTACA GCTCCGTGGGCTATGACTTTGCCTACTACAAAAAAAGAGCACCTATATTTTTCATGCCAGAGAAATTTATCAAAGGCCAT TACGTGCCCACCAGCCTTTTCGAGAAAATCATACCAGGGCCTAAATGCCTGGATATAAAATTAGTGATCAAGTCGCTTCG CCCAGAGCAGTACAAAAATCACAAATCGTCAACCAAAGCTTTTTTTCGTTTTATGGATTCCGAAAATTGCAAACGTGCCT TCGACGTCACACACCCAGAGTCTGAAAGCGCATCATAA
Upstream 100 bases:
>100_bases ACTGAACCCTGCAGCCCGTGAATGCCTGGACGTATTGAACACTGCATTATTTATTAAAAAAAGCATGCTGCCTGGTTTGT CGCCAGAAAGGGCTGGCGTT
Downstream 100 bases:
>100_bases ATGCAAAAGCTTCAGGAATACTTTTTAAATACAGAGGCCCTCATGAAAACCAGACATTCTTTAATGGACATCTACGCAGA GCATGAGGGCTATGTATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MNGIFKSKNFPFQLKDNKIVSNDNQNTQASIVKSKKLRIVDCATSGNMASLLTVSEHSYANLELIISNDSEFTSTSATSR TEAGKDIYTGLADSYLTQGLHLFIFEFDKKHIEKNAELTFSERGKPVDLQYVYGDIPCYNLLNHKTSGLYPRIEKNTLHL QNKEQSIISIMLSNSYSQADKSLYASIINNEIQAKYSLYSERASLTGDNAYEAFKYALKSDDSCFYITSKEVVDREKDEY IKKHLAILGSTQHKELFLNAKSLFCSFGFPGIIFPELKDIHISALKYKLYLMWHGVSAGDKDSYEIASYNGNRNDGIFAC STYEERNFKLLGHDTIYLGGYPRMDKWCNDVPLNVNAAVIFFTWRRNLYEATLAEFLSSDYVTTIVELVKAIAKSRPKLE LYYFIHNSIPAQHVECLAAILRAHSSNIRFVNNNDTHTFNHIFNTSQYLITDYSSVGYDFAYYKKRAPIFFMPEKFIKGH YVPTSLFEKIIPGPKCLDIKLVIKSLRPEQYKNHKSSTKAFFRFMDSENCKRAFDVTHPESESAS
Sequences:
>Translated_545_residues MNGIFKSKNFPFQLKDNKIVSNDNQNTQASIVKSKKLRIVDCATSGNMASLLTVSEHSYANLELIISNDSEFTSTSATSR TEAGKDIYTGLADSYLTQGLHLFIFEFDKKHIEKNAELTFSERGKPVDLQYVYGDIPCYNLLNHKTSGLYPRIEKNTLHL QNKEQSIISIMLSNSYSQADKSLYASIINNEIQAKYSLYSERASLTGDNAYEAFKYALKSDDSCFYITSKEVVDREKDEY IKKHLAILGSTQHKELFLNAKSLFCSFGFPGIIFPELKDIHISALKYKLYLMWHGVSAGDKDSYEIASYNGNRNDGIFAC STYEERNFKLLGHDTIYLGGYPRMDKWCNDVPLNVNAAVIFFTWRRNLYEATLAEFLSSDYVTTIVELVKAIAKSRPKLE LYYFIHNSIPAQHVECLAAILRAHSSNIRFVNNNDTHTFNHIFNTSQYLITDYSSVGYDFAYYKKRAPIFFMPEKFIKGH YVPTSLFEKIIPGPKCLDIKLVIKSLRPEQYKNHKSSTKAFFRFMDSENCKRAFDVTHPESESAS >Mature_545_residues MNGIFKSKNFPFQLKDNKIVSNDNQNTQASIVKSKKLRIVDCATSGNMASLLTVSEHSYANLELIISNDSEFTSTSATSR TEAGKDIYTGLADSYLTQGLHLFIFEFDKKHIEKNAELTFSERGKPVDLQYVYGDIPCYNLLNHKTSGLYPRIEKNTLHL QNKEQSIISIMLSNSYSQADKSLYASIINNEIQAKYSLYSERASLTGDNAYEAFKYALKSDDSCFYITSKEVVDREKDEY IKKHLAILGSTQHKELFLNAKSLFCSFGFPGIIFPELKDIHISALKYKLYLMWHGVSAGDKDSYEIASYNGNRNDGIFAC STYEERNFKLLGHDTIYLGGYPRMDKWCNDVPLNVNAAVIFFTWRRNLYEATLAEFLSSDYVTTIVELVKAIAKSRPKLE LYYFIHNSIPAQHVECLAAILRAHSSNIRFVNNNDTHTFNHIFNTSQYLITDYSSVGYDFAYYKKRAPIFFMPEKFIKGH YVPTSLFEKIIPGPKCLDIKLVIKSLRPEQYKNHKSSTKAFFRFMDSENCKRAFDVTHPESESAS
Specific function: Unknown
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62348; Mature: 62348
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGIFKSKNFPFQLKDNKIVSNDNQNTQASIVKSKKLRIVDCATSGNMASLLTVSEHSYA CCCCCCCCCCCEEECCCEEECCCCCCCHHHHEECCCEEEEEECCCCCEEEEEEECCCCCC NLELIISNDSEFTSTSATSRTEAGKDIYTGLADSYLTQGLHLFIFEFDKKHIEKNAELTF EEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEECHHHHCCCCCEEE SERGKPVDLQYVYGDIPCYNLLNHKTSGLYPRIEKNTLHLQNKEQSIISIMLSNSYSQAD CCCCCEEEEEEEEECCCHHHHHCCCCCCCCCCEECCEEEECCCCCCEEEEEECCCHHHHH KSLYASIINNEIQAKYSLYSERASLTGDNAYEAFKYALKSDDSCFYITSKEVVDREKDEY HHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECHHHHCCHHHHH IKKHLAILGSTQHKELFLNAKSLFCSFGFPGIIFPELKDIHISALKYKLYLMWHGVSAGD HHHHHHHHCCCCCHHEEEEHHHHHEECCCCCEECCCCCCEEEEEEEEEEEEEEECCCCCC KDSYEIASYNGNRNDGIFACSTYEERNFKLLGHDTIYLGGYPRMDKWCNDVPLNVNAAVI CCCEEEEECCCCCCCCEEEEECCCCCCEEEEECCEEEECCCCCHHHHCCCCCCCCCEEEE FFTWRRNLYEATLAEFLSSDYVTTIVELVKAIAKSRPKLELYYFIHNSIPAQHVECLAAI EEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHH LRAHSSNIRFVNNNDTHTFNHIFNTSQYLITDYSSVGYDFAYYKKRAPIFFMPEKFIKGH HHHCCCCEEEEECCCCEEEHHHHCCCEEEEEECHHCCCCHHHHHCCCCEEECCHHHHCCC YVPTSLFEKIIPGPKCLDIKLVIKSLRPEQYKNHKSSTKAFFRFMDSENCKRAFDVTHPE CCCHHHHHHHCCCCCEEEHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCHHCCCCCCC SESAS CCCCC >Mature Secondary Structure MNGIFKSKNFPFQLKDNKIVSNDNQNTQASIVKSKKLRIVDCATSGNMASLLTVSEHSYA CCCCCCCCCCCEEECCCEEECCCCCCCHHHHEECCCEEEEEECCCCCEEEEEEECCCCCC NLELIISNDSEFTSTSATSRTEAGKDIYTGLADSYLTQGLHLFIFEFDKKHIEKNAELTF EEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEECHHHHCCCCCEEE SERGKPVDLQYVYGDIPCYNLLNHKTSGLYPRIEKNTLHLQNKEQSIISIMLSNSYSQAD CCCCCEEEEEEEEECCCHHHHHCCCCCCCCCCEECCEEEECCCCCCEEEEEECCCHHHHH KSLYASIINNEIQAKYSLYSERASLTGDNAYEAFKYALKSDDSCFYITSKEVVDREKDEY HHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECHHHHCCHHHHH IKKHLAILGSTQHKELFLNAKSLFCSFGFPGIIFPELKDIHISALKYKLYLMWHGVSAGD HHHHHHHHCCCCCHHEEEEHHHHHEECCCCCEECCCCCCEEEEEEEEEEEEEEECCCCCC KDSYEIASYNGNRNDGIFACSTYEERNFKLLGHDTIYLGGYPRMDKWCNDVPLNVNAAVI CCCEEEEECCCCCCCCEEEEECCCCCCEEEEECCEEEECCCCCHHHHCCCCCCCCCEEEE FFTWRRNLYEATLAEFLSSDYVTTIVELVKAIAKSRPKLELYYFIHNSIPAQHVECLAAI EEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHH LRAHSSNIRFVNNNDTHTFNHIFNTSQYLITDYSSVGYDFAYYKKRAPIFFMPEKFIKGH HHHCCCCEEEEECCCCEEEHHHHCCCEEEEEECHHCCCCHHHHHCCCCEEECCHHHHCCC YVPTSLFEKIIPGPKCLDIKLVIKSLRPEQYKNHKSSTKAFFRFMDSENCKRAFDVTHPE CCCHHHHHHHCCCCCEEEHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCHHCCCCCCC SESAS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA