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The map label for this gene is trg [H]

Identifier: 66044040

GI number: 66044040

Start: 890888

End: 892543

Strand: Reverse

Name: trg [H]

Synonym: Psyr_0785

Alternate gene names: 66044040

Gene position: 892543-890888 (Counterclockwise)

Preceding gene: 66044041

Following gene: 66044039

Centisome position: 14.65

GC content: 60.33

Gene sequence:

>1656_bases
ATGAAATGGTTCTACGATCTGAAGATTTCCACCAAGCTGATTACCTCGTTTCTGGTGGTTCTGGCGTTGACCGCGGCCAT
GGGAGTCTTTGCCATCATCCAGCTCGGCCAGGTCAACCAGGCCGCTCAGGACATCAAGGAAAACTGGATGCCGTCCATGC
GGGCGGCCGCGGGCATGCGCTTCTTCGCCGCCAATTACCGCCTGAAGGAAAACCGCCATATTGCAGCCGACACCGCCCAG
GAAAAGGCGCAGATGGAGCTGGAAGCAGCGGACTCTCGCAAACAGTTCGAAACCCGCCTGGCCATTTACGACAAGTTGAT
TTCTAGTGATGACGATCGTCAGTTGTTCAATAGCGTGAGCGCGTCATGGGCCGCCTACCTGAAGGTCAGCAACGACCTGT
TCGATCAGTCACGCCAAAACCTGGAGGCTCAGGCGCGGGCATTGCTCAAGGGCGAATCCAAGACGCATTTCGATGAAGTG
ACCACTCAGCTGCAAAAAATGGTCGAGCTGAATGAAGCTGGCGCGACTATCGCTGGCAACAAAGGCACCAGCCTGTACGA
AACCTCCCGCATCTCGATCATCGTGGTACTGATTGCAGCCTTGCTGATCGGCCTGGGTCTGGCGCTGTTCATCGCCCGGA
TAATCTCCCGCCCGCTGAAAGAGGCCGCAACGGCCGCCGAGCAACTGGCAGAGGGCAATCTCAACGCCCACATCGGCCAC
GGTTCCAGGGACGAGACCGGCATGGTGCTCAATGCCATGCGCAACATGGTCGGCAAGCTGTCGCACATCATCGGCGAAGT
GCGTAATGCCGCCGACAACCTGGCCAGCGCTTCGGAAGAAGTCAGCGCCACTGCACAGTCGATGAGCCAGGCCACCAGCG
AGCAGGCCGCCAGCGTCGAAGAGACCAGCGCATCGGTCGAGCAGATGAGCGCCAGCATCAACCAGAACACCGAGAACGCC
AAAGTCACCGATGGCATGGCCAGCAAGGCCGCCAAGGAAGCCACCGATGGCGGCGAATCGGTGCAGCAGACCGTCGTGGC
GATGAAGAAAATCGCCCAGCGCATCAGCATCATCGACGACATCGCTTACCAGACCAACCTGCTCGCTCTCAACGCCGCCA
TCGAAGCCGCGCGCGCCGGCGAACATGGCAAGGGGTTCGCGGTAGTGGCCGCCGAGGTGCGCAAGCTGGCCGAACGCAGC
CAGGTGGCCGCGCAGGAAATCGGCGAGCTGTCGTCGAGCAGCGTGGACATGGCTGAGAAGGCCGGCAAGTTGCTGGACGA
GATGGTGCCTTCGATCAACAAGACCTCCGACCTCGTGCAGGAAATCAGTGCCGCGTCGGAAGAGCAGGCAGCCGGTGTGG
CGCAGATCAACACCGCAATGACCCAGCTCAACCAGGTCACCCAGCAAAACGCATCAAGCAGCGAAGAACTGGCGGCTACG
GCTGAAGAAATGAGCAGCCAGGCCGAACAACTGCAACAGGCCATGAGTTTCTTCACCCTCGACGCATCGCCAAGGGCCGT
CGCACAGAGCGCTACTGTCGACAGCCGCAACAGCCCGAACCGTCAGCCTCCGCGGCCACCGCAACAGGCTCCGCGCAAGG
CATTTGCGCAAAGCATGGCGGGTGCCCCGGACGAATCGGAATTTACCCGTTTCTGA

Upstream 100 bases:

>100_bases
CAACCAGATCGTACACATGGAGGCCCGCTCGACCCAGGCGCCTCAATTCCTGCTGCCCACTTCTCGCTGACGGATTCGCA
ATTCCCAAGGAGTTACTTCA

Downstream 100 bases:

>100_bases
TTGCCGGCTTCGATAGAGACTCCAGGGGAGAACGACATGGGCTCATTGGTCACGACTCGGCAGACCGCAGCGACGGTCGA
AGAAGAGGCGCAGTACCTGA

Product: histidine kinase, HAMP region: chemotaxis sensory transducer

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MKWFYDLKISTKLITSFLVVLALTAAMGVFAIIQLGQVNQAAQDIKENWMPSMRAAAGMRFFAANYRLKENRHIAADTAQ
EKAQMELEAADSRKQFETRLAIYDKLISSDDDRQLFNSVSASWAAYLKVSNDLFDQSRQNLEAQARALLKGESKTHFDEV
TTQLQKMVELNEAGATIAGNKGTSLYETSRISIIVVLIAALLIGLGLALFIARIISRPLKEAATAAEQLAEGNLNAHIGH
GSRDETGMVLNAMRNMVGKLSHIIGEVRNAADNLASASEEVSATAQSMSQATSEQAASVEETSASVEQMSASINQNTENA
KVTDGMASKAAKEATDGGESVQQTVVAMKKIAQRISIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERS
QVAAQEIGELSSSSVDMAEKAGKLLDEMVPSINKTSDLVQEISAASEEQAAGVAQINTAMTQLNQVTQQNASSSEELAAT
AEEMSSQAEQLQQAMSFFTLDASPRAVAQSATVDSRNSPNRQPPRPPQQAPRKAFAQSMAGAPDESEFTRF

Sequences:

>Translated_551_residues
MKWFYDLKISTKLITSFLVVLALTAAMGVFAIIQLGQVNQAAQDIKENWMPSMRAAAGMRFFAANYRLKENRHIAADTAQ
EKAQMELEAADSRKQFETRLAIYDKLISSDDDRQLFNSVSASWAAYLKVSNDLFDQSRQNLEAQARALLKGESKTHFDEV
TTQLQKMVELNEAGATIAGNKGTSLYETSRISIIVVLIAALLIGLGLALFIARIISRPLKEAATAAEQLAEGNLNAHIGH
GSRDETGMVLNAMRNMVGKLSHIIGEVRNAADNLASASEEVSATAQSMSQATSEQAASVEETSASVEQMSASINQNTENA
KVTDGMASKAAKEATDGGESVQQTVVAMKKIAQRISIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERS
QVAAQEIGELSSSSVDMAEKAGKLLDEMVPSINKTSDLVQEISAASEEQAAGVAQINTAMTQLNQVTQQNASSSEELAAT
AEEMSSQAEQLQQAMSFFTLDASPRAVAQSATVDSRNSPNRQPPRPPQQAPRKAFAQSMAGAPDESEFTRF
>Mature_551_residues
MKWFYDLKISTKLITSFLVVLALTAAMGVFAIIQLGQVNQAAQDIKENWMPSMRAAAGMRFFAANYRLKENRHIAADTAQ
EKAQMELEAADSRKQFETRLAIYDKLISSDDDRQLFNSVSASWAAYLKVSNDLFDQSRQNLEAQARALLKGESKTHFDEV
TTQLQKMVELNEAGATIAGNKGTSLYETSRISIIVVLIAALLIGLGLALFIARIISRPLKEAATAAEQLAEGNLNAHIGH
GSRDETGMVLNAMRNMVGKLSHIIGEVRNAADNLASASEEVSATAQSMSQATSEQAASVEETSASVEQMSASINQNTENA
KVTDGMASKAAKEATDGGESVQQTVVAMKKIAQRISIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERS
QVAAQEIGELSSSSVDMAEKAGKLLDEMVPSINKTSDLVQEISAASEEQAAGVAQINTAMTQLNQVTQQNASSSEELAAT
AEEMSSQAEQLQQAMSFFTLDASPRAVAQSATVDSRNSPNRQPPRPPQQAPRKAFAQSMAGAPDESEFTRF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=336, Percent_Identity=39.5833333333333, Blast_Score=218, Evalue=9e-58,
Organism=Escherichia coli, GI2367378, Length=546, Percent_Identity=32.7838827838828, Blast_Score=211, Evalue=7e-56,
Organism=Escherichia coli, GI1788194, Length=331, Percent_Identity=37.7643504531722, Blast_Score=201, Evalue=8e-53,
Organism=Escherichia coli, GI1788195, Length=336, Percent_Identity=39.5833333333333, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI1789453, Length=328, Percent_Identity=35.3658536585366, Blast_Score=175, Evalue=7e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 59171; Mature: 59171

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWFYDLKISTKLITSFLVVLALTAAMGVFAIIQLGQVNQAAQDIKENWMPSMRAAAGMR
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FFAANYRLKENRHIAADTAQEKAQMELEAADSRKQFETRLAIYDKLISSDDDRQLFNSVS
HHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ASWAAYLKVSNDLFDQSRQNLEAQARALLKGESKTHFDEVTTQLQKMVELNEAGATIAGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECC
KGTSLYETSRISIIVVLIAALLIGLGLALFIARIISRPLKEAATAAEQLAEGNLNAHIGH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
GSRDETGMVLNAMRNMVGKLSHIIGEVRNAADNLASASEEVSATAQSMSQATSEQAASVE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETSASVEQMSASINQNTENAKVTDGMASKAAKEATDGGESVQQTVVAMKKIAQRISIIDD
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
IAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQEIGELSSSSVDMAEK
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AGKLLDEMVPSINKTSDLVQEISAASEEQAAGVAQINTAMTQLNQVTQQNASSSEELAAT
HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AEEMSSQAEQLQQAMSFFTLDASPRAVAQSATVDSRNSPNRQPPRPPQQAPRKAFAQSMA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GAPDESEFTRF
CCCCCCCCCCC
>Mature Secondary Structure
MKWFYDLKISTKLITSFLVVLALTAAMGVFAIIQLGQVNQAAQDIKENWMPSMRAAAGMR
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FFAANYRLKENRHIAADTAQEKAQMELEAADSRKQFETRLAIYDKLISSDDDRQLFNSVS
HHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ASWAAYLKVSNDLFDQSRQNLEAQARALLKGESKTHFDEVTTQLQKMVELNEAGATIAGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECC
KGTSLYETSRISIIVVLIAALLIGLGLALFIARIISRPLKEAATAAEQLAEGNLNAHIGH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
GSRDETGMVLNAMRNMVGKLSHIIGEVRNAADNLASASEEVSATAQSMSQATSEQAASVE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETSASVEQMSASINQNTENAKVTDGMASKAAKEATDGGESVQQTVVAMKKIAQRISIIDD
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
IAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQEIGELSSSSVDMAEK
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AGKLLDEMVPSINKTSDLVQEISAASEEQAAGVAQINTAMTQLNQVTQQNASSSEELAAT
HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AEEMSSQAEQLQQAMSFFTLDASPRAVAQSATVDSRNSPNRQPPRPPQQAPRKAFAQSMA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GAPDESEFTRF
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]