| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is phnC1 [H]
Identifier: 66043961
GI number: 66043961
Start: 798617
End: 799414
Strand: Reverse
Name: phnC1 [H]
Synonym: Psyr_0694
Alternate gene names: 66043961
Gene position: 799414-798617 (Counterclockwise)
Preceding gene: 66043962
Following gene: 66043960
Centisome position: 13.12
GC content: 66.67
Gene sequence:
>798_bases ATGACCCTGCGTCTGTCCGCCATCGAGCTGCGCCACAGCGACGGCACACTGGCGTTGCGCGGCCTGGACCTGAGCATCGC TCGTGGCGAACGGGTAGCGATCATCGGGCCGTCCGGTGCGGGCAAGACCACGCTGCTTAACCTGCTGGCCAGCGCTCTGC CGCCCAGCGCCGGGCAACTGCAGGTGCTGGGGACTGATCCCTGGCAGCTCTCCAGCAAACGACGCCAGCGCCTGCGCAGC CGCATTGCGCTGATTCATCAGGCACCGCCGTTGCCGGCGCGCCAGCGGGTGGTCACTGCGGTGTCGGCGGGCAGGCTTGG TCAATGGGGGCTGGGCAAAAGCCTGCTGAACCTGCTGCATCCACTCGACATCAGCGGCGCCCGTGAGGTGCTGGCACGTC TGGACCTGGCGGACAAACTGTTCGAACGTTGCCAGCAGTTGTCCGGCGGACAGCTGCAACGTGTCGGCATTGCCCGCGCC TTGTATCAGCAACCCGAACTGCTGCTGGCCGACGAGCCGGTTTCGGCGATGGACCCGCGCCTCGCCGATCACACCCTGGC GCTGCTGGGTCAGCACGCCATCGAGCACAACGTGACGCTGGTCGCCAGCCTGCATGCGGTGGAACTGGCGCTGGCGCATT TTCCGCGAATCATCGGGGTGCGCGACGGGCGCATTCACTTCGACCTCGCCGCCAGCGAGGTCGGCCGGGAGCATCTCGAC ACGCTGTATGCCAATGAACAACTCAGCCCTCAGCCGGTTTCGGATGCGGCTGAAACACGCTGGACGCCGCGATGCTGA
Upstream 100 bases:
>100_bases AGGCGATCCTCGATCTTCAGGCCGCCAGCCGCTTCATCGAGACCAAGCCAGAGAACTACAAAGGCATCGAAGAAGCCGCA CGCGCTGCCGACCTGCTGAA
Downstream 100 bases:
>100_bases GTCGGGATCAGCGCGACCCGGCGGCAACGCCGCGCCTGTTGCTGACGTTGCTGGCGGTCGCCCTGCTCTGGCCGGGCATT CGTCTGGCCGAACTGAATCC
Product: ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTLRLSAIELRHSDGTLALRGLDLSIARGERVAIIGPSGAGKTTLLNLLASALPPSAGQLQVLGTDPWQLSSKRRQRLRS RIALIHQAPPLPARQRVVTAVSAGRLGQWGLGKSLLNLLHPLDISGAREVLARLDLADKLFERCQQLSGGQLQRVGIARA LYQQPELLLADEPVSAMDPRLADHTLALLGQHAIEHNVTLVASLHAVELALAHFPRIIGVRDGRIHFDLAASEVGREHLD TLYANEQLSPQPVSDAAETRWTPRC
Sequences:
>Translated_265_residues MTLRLSAIELRHSDGTLALRGLDLSIARGERVAIIGPSGAGKTTLLNLLASALPPSAGQLQVLGTDPWQLSSKRRQRLRS RIALIHQAPPLPARQRVVTAVSAGRLGQWGLGKSLLNLLHPLDISGAREVLARLDLADKLFERCQQLSGGQLQRVGIARA LYQQPELLLADEPVSAMDPRLADHTLALLGQHAIEHNVTLVASLHAVELALAHFPRIIGVRDGRIHFDLAASEVGREHLD TLYANEQLSPQPVSDAAETRWTPRC >Mature_264_residues TLRLSAIELRHSDGTLALRGLDLSIARGERVAIIGPSGAGKTTLLNLLASALPPSAGQLQVLGTDPWQLSSKRRQRLRSR IALIHQAPPLPARQRVVTAVSAGRLGQWGLGKSLLNLLHPLDISGAREVLARLDLADKLFERCQQLSGGQLQRVGIARAL YQQPELLLADEPVSAMDPRLADHTLALLGQHAIEHNVTLVASLHAVELALAHFPRIIGVRDGRIHFDLAASEVGREHLDT LYANEQLSPQPVSDAAETRWTPRC
Specific function: Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system [H]
COG id: COG3638
COG function: function code P; ABC-type phosphate/phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI255708477, Length=165, Percent_Identity=37.5757575757576, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI148612844, Length=165, Percent_Identity=36.3636363636364, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI4505771, Length=174, Percent_Identity=32.183908045977, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI9961252, Length=174, Percent_Identity=32.183908045977, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI42741659, Length=160, Percent_Identity=32.5, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI157502203, Length=216, Percent_Identity=29.1666666666667, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI157502201, Length=216, Percent_Identity=29.1666666666667, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI9961250, Length=163, Percent_Identity=33.1288343558282, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI27262624, Length=180, Percent_Identity=28.3333333333333, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI27262626, Length=180, Percent_Identity=28.3333333333333, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI110832839, Length=222, Percent_Identity=28.8288288288288, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI110832835, Length=222, Percent_Identity=28.8288288288288, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI110832837, Length=222, Percent_Identity=28.8288288288288, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1790544, Length=236, Percent_Identity=33.8983050847458, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1787029, Length=222, Percent_Identity=36.9369369369369, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1788225, Length=230, Percent_Identity=36.5217391304348, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1786253, Length=215, Percent_Identity=36.2790697674419, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI87081834, Length=229, Percent_Identity=32.7510917030568, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1787105, Length=213, Percent_Identity=36.150234741784, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1789873, Length=233, Percent_Identity=33.0472103004292, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787089, Length=232, Percent_Identity=31.4655172413793, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1786703, Length=197, Percent_Identity=32.994923857868, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI87081791, Length=236, Percent_Identity=32.6271186440678, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1787370, Length=224, Percent_Identity=32.5892857142857, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1787164, Length=230, Percent_Identity=33.4782608695652, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1786319, Length=224, Percent_Identity=29.0178571428571, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1786563, Length=197, Percent_Identity=34.010152284264, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87081709, Length=179, Percent_Identity=33.5195530726257, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789032, Length=211, Percent_Identity=29.8578199052133, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1789891, Length=212, Percent_Identity=31.1320754716981, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788761, Length=232, Percent_Identity=31.0344827586207, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787712, Length=209, Percent_Identity=30.1435406698565, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1790739, Length=259, Percent_Identity=29.3436293436293, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1789962, Length=219, Percent_Identity=29.2237442922374, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1786803, Length=235, Percent_Identity=31.063829787234, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787758, Length=238, Percent_Identity=31.9327731092437, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787112, Length=208, Percent_Identity=33.1730769230769, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790162, Length=201, Percent_Identity=30.3482587064677, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786398, Length=192, Percent_Identity=34.8958333333333, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786345, Length=248, Percent_Identity=28.2258064516129, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788450, Length=170, Percent_Identity=32.9411764705882, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1789672, Length=209, Percent_Identity=26.7942583732057, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1786872, Length=196, Percent_Identity=31.6326530612245, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI48994997, Length=200, Percent_Identity=30, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787759, Length=209, Percent_Identity=31.1004784688995, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787500, Length=194, Percent_Identity=29.3814432989691, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786698, Length=212, Percent_Identity=26.4150943396226, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI87082267, Length=179, Percent_Identity=30.7262569832402, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788506, Length=248, Percent_Identity=31.8548387096774, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1789963, Length=239, Percent_Identity=28.8702928870293, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI48994943, Length=188, Percent_Identity=30.8510638297872, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1788644, Length=238, Percent_Identity=31.9327731092437, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1786653, Length=263, Percent_Identity=28.1368821292776, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789864, Length=220, Percent_Identity=26.3636363636364, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786654, Length=211, Percent_Identity=28.436018957346, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1790467, Length=165, Percent_Identity=31.5151515151515, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787792, Length=234, Percent_Identity=25.6410256410256, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1789586, Length=196, Percent_Identity=29.5918367346939, Blast_Score=61, Evalue=7e-11, Organism=Escherichia coli, GI1789991, Length=240, Percent_Identity=28.3333333333333, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17543740, Length=190, Percent_Identity=31.0526315789474, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71992290, Length=215, Percent_Identity=32.5581395348837, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17558664, Length=193, Percent_Identity=32.6424870466321, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17567269, Length=165, Percent_Identity=35.1515151515151, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193202349, Length=186, Percent_Identity=30.1075268817204, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17565938, Length=189, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17567265, Length=163, Percent_Identity=34.9693251533742, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17511077, Length=235, Percent_Identity=31.4893617021277, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI115535101, Length=165, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193211015, Length=169, Percent_Identity=32.5443786982249, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193211017, Length=169, Percent_Identity=32.5443786982249, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71996809, Length=169, Percent_Identity=32.5443786982249, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17541710, Length=173, Percent_Identity=30.635838150289, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193209708, Length=177, Percent_Identity=31.0734463276836, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI212646699, Length=183, Percent_Identity=28.4153005464481, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193208177, Length=179, Percent_Identity=29.608938547486, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17569143, Length=162, Percent_Identity=34.5679012345679, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI25146777, Length=167, Percent_Identity=31.1377245508982, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17569145, Length=168, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI17136662, Length=223, Percent_Identity=33.1838565022422, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI85726357, Length=162, Percent_Identity=30.8641975308642, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI281363262, Length=164, Percent_Identity=33.5365853658537, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24653245, Length=164, Percent_Identity=33.5365853658537, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI28574744, Length=209, Percent_Identity=29.6650717703349, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24641565, Length=165, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24659289, Length=163, Percent_Identity=29.4478527607362, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI45552337, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552341, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552359, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552355, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552347, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45550972, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552339, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552335, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24583969, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552361, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552351, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552345, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552363, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552353, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552357, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552343, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552349, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR012693 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.28 [H]
Molecular weight: Translated: 28771; Mature: 28639
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRLSAIELRHSDGTLALRGLDLSIARGERVAIIGPSGAGKTTLLNLLASALPPSAGQL CEEEEEEEEEECCCCEEEEEECEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEE QVLGTDPWQLSSKRRQRLRSRIALIHQAPPLPARQRVVTAVSAGRLGQWGLGKSLLNLLH EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHC PLDISGAREVLARLDLADKLFERCQQLSGGQLQRVGIARALYQQPELLLADEPVSAMDPR CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHCCC LADHTLALLGQHAIEHNVTLVASLHAVELALAHFPRIIGVRDGRIHFDLAASEVGREHLD HHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCHHEECCCCEEEEEECHHHHHHHHHH TLYANEQLSPQPVSDAAETRWTPRC HHHCCCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure TLRLSAIELRHSDGTLALRGLDLSIARGERVAIIGPSGAGKTTLLNLLASALPPSAGQL EEEEEEEEEECCCCEEEEEECEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEE QVLGTDPWQLSSKRRQRLRSRIALIHQAPPLPARQRVVTAVSAGRLGQWGLGKSLLNLLH EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHC PLDISGAREVLARLDLADKLFERCQQLSGGQLQRVGIARALYQQPELLLADEPVSAMDPR CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHCCC LADHTLALLGQHAIEHNVTLVASLHAVELALAHFPRIIGVRDGRIHFDLAASEVGREHLD HHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCHHEECCCCEEEEEECHHHHHHHHHH TLYANEQLSPQPVSDAAETRWTPRC HHHCCCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA