| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043951
Identifier: 66043951
GI number: 66043951
Start: 787414
End: 787830
Strand: Reverse
Name: 66043951
Synonym: Psyr_0684
Alternate gene names: NA
Gene position: 787830-787414 (Counterclockwise)
Preceding gene: 66043952
Following gene: 66043944
Centisome position: 12.93
GC content: 50.84
Gene sequence:
>417_bases ATGTCTGCAAGTGAGAAAAATTTCTACCTAGCGCGATGGATTATAGGCTTTGCTTGCCTCCTGATCGCTGGATGGTATTT AGCACTGCCAAGGGTCGTCATTTATTACTCAGCCGATGGCTCAAAAGGATTTCATTACGTACTCAATACGCAGCATTCAA TCTTACGACGGGACTTGCTGCCCGGCGAGACAACCGGTGACACCGGTCATATTTTGCCCGACGAGGATTTCTTTATGATG TTCGATTGGTGGGCTGATAAGACCCCGCCACGGTGCATCGACATCACACCAAAACGGTGGAGCATGTTGGATATTTATCT TGATGGGAGCGGTAAGATTGACATCGCCAAGACAGCCCCTGACGTCACTGCTCGTCTGAAACAGTGTCCGGGGCGACCAG ACCCCTTCCGGCCCTGA
Upstream 100 bases:
>100_bases CTGTACAAGGAATATCCAAACGGCGGCCTTACCGGAAAGATCGTTATGGACAAAGTGTTGGCCGTACCTATAAGCGACTG GGCGACAGGGGTCCAACCGC
Downstream 100 bases:
>100_bases GGCGTGCTACCCGCGCCACGTCAAACTCGGCACAGCCAATGAGTAAACACAGAAAACACTCCCGGCATCTAAAGAAGAGC TGACCCATACCCAGACTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSASEKNFYLARWIIGFACLLIAGWYLALPRVVIYYSADGSKGFHYVLNTQHSILRRDLLPGETTGDTGHILPDEDFFMM FDWWADKTPPRCIDITPKRWSMLDIYLDGSGKIDIAKTAPDVTARLKQCPGRPDPFRP
Sequences:
>Translated_138_residues MSASEKNFYLARWIIGFACLLIAGWYLALPRVVIYYSADGSKGFHYVLNTQHSILRRDLLPGETTGDTGHILPDEDFFMM FDWWADKTPPRCIDITPKRWSMLDIYLDGSGKIDIAKTAPDVTARLKQCPGRPDPFRP >Mature_137_residues SASEKNFYLARWIIGFACLLIAGWYLALPRVVIYYSADGSKGFHYVLNTQHSILRRDLLPGETTGDTGHILPDEDFFMMF DWWADKTPPRCIDITPKRWSMLDIYLDGSGKIDIAKTAPDVTARLKQCPGRPDPFRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15755; Mature: 15624
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASEKNFYLARWIIGFACLLIAGWYLALPRVVIYYSADGSKGFHYVLNTQHSILRRDLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEECCHHHHHHHHCC PGETTGDTGHILPDEDFFMMFDWWADKTPPRCIDITPKRWSMLDIYLDGSGKIDIAKTAP CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEEEECCCCCEEEECCCC DVTARLKQCPGRPDPFRP HHHHHHHHCCCCCCCCCC >Mature Secondary Structure SASEKNFYLARWIIGFACLLIAGWYLALPRVVIYYSADGSKGFHYVLNTQHSILRRDLL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEECCHHHHHHHHCC PGETTGDTGHILPDEDFFMMFDWWADKTPPRCIDITPKRWSMLDIYLDGSGKIDIAKTAP CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEEEECCCCCEEEECCCC DVTARLKQCPGRPDPFRP HHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA