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The map label for this gene is yraR [H]

Identifier: 66043900

GI number: 66043900

Start: 723078

End: 723719

Strand: Reverse

Name: yraR [H]

Synonym: Psyr_0633

Alternate gene names: 66043900

Gene position: 723719-723078 (Counterclockwise)

Preceding gene: 66043901

Following gene: 66043896

Centisome position: 11.88

GC content: 66.04

Gene sequence:

>642_bases
ATGTACCTGACGCCGCAACACATCCTGCTCGCAGGAGCCACGGGCCTTACAGGCGAGCATTTGCTGGACCGGCTGCTCAG
CGAGCCGACCGTCACCCGCGTGCTGGCACCGACGCGCAAGCCGCTGGCCGAACACTCGCACCTGGAAAATCCGGTCGGCG
AGCTGGCGACGCTGCTGCCAACGCTGTCTGGCCGGGTGGACATCGCATTCTGCTGCCTGGGCACCACGATCAAACAGGCG
GGCTCGCAGGACGCCTTCAAGGCGGTCGATCTGGACATGGTCACAGCGTTCGCCAGCCGCGCCCGCGAGCTCGGCGCTCG
CCATTTGCTGGTGATCAGCGCAGTCGGCGCAGATCCGCAGTCCAGCACCTTCTACAACCGCGTCAAAGGCGAAATGGAAC
AGGCGCTTCGTGCGCAGGGCTGGCCGCAACTGACCATCGCCCGCCCTTCCCTGCTGGTGGGCAGCCGTCCTGAAACCCGC
TGGGTCGAGCAACTGGCGGCACCTATCGCCAAACTGATCCCCGGCAAATACGGCGCCATCGAAGCCTGCCACCTGGCCCG
CGCCCTGTGGCGGCTGGCGCTGGAAGAGCAGAACGGCGAACGGATCGTCGAATCGGATGAGCTGCGCAAGCTGGGCAAGT
AG

Upstream 100 bases:

>100_bases
CGCAAGAGCCAGGCCGAACGCGCGTTGAGCACGGCGTTGAACCGCACGGAAGCGAAGACTTCGACTAGCCGCTAGGCTTA
GCAGTATCAAGGAGAACGAT

Downstream 100 bases:

>100_bases
GTTCGCCGAGGCTCAGCGATGATCGTCCCCACGCTCCGCGCTCATCTTTAAACACAAGTCCGATTTTGATTCTGGCCGGA
GGCCGTAGGAGCGAACCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MYLTPQHILLAGATGLTGEHLLDRLLSEPTVTRVLAPTRKPLAEHSHLENPVGELATLLPTLSGRVDIAFCCLGTTIKQA
GSQDAFKAVDLDMVTAFASRARELGARHLLVISAVGADPQSSTFYNRVKGEMEQALRAQGWPQLTIARPSLLVGSRPETR
WVEQLAAPIAKLIPGKYGAIEACHLARALWRLALEEQNGERIVESDELRKLGK

Sequences:

>Translated_213_residues
MYLTPQHILLAGATGLTGEHLLDRLLSEPTVTRVLAPTRKPLAEHSHLENPVGELATLLPTLSGRVDIAFCCLGTTIKQA
GSQDAFKAVDLDMVTAFASRARELGARHLLVISAVGADPQSSTFYNRVKGEMEQALRAQGWPQLTIARPSLLVGSRPETR
WVEQLAAPIAKLIPGKYGAIEACHLARALWRLALEEQNGERIVESDELRKLGK
>Mature_213_residues
MYLTPQHILLAGATGLTGEHLLDRLLSEPTVTRVLAPTRKPLAEHSHLENPVGELATLLPTLSGRVDIAFCCLGTTIKQA
GSQDAFKAVDLDMVTAFASRARELGARHLLVISAVGADPQSSTFYNRVKGEMEQALRAQGWPQLTIARPSLLVGSRPETR
WVEQLAAPIAKLIPGKYGAIEACHLARALWRLALEEQNGERIVESDELRKLGK

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=183, Percent_Identity=28.4153005464481, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI148728168, Length=183, Percent_Identity=28.4153005464481, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI148728164, Length=183, Percent_Identity=28.4153005464481, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI148728166, Length=221, Percent_Identity=26.2443438914027, Blast_Score=81, Evalue=6e-16,
Organism=Escherichia coli, GI87082218, Length=206, Percent_Identity=48.0582524271845, Blast_Score=190, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI71983631, Length=204, Percent_Identity=32.843137254902, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 23201; Mature: 23201

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLTPQHILLAGATGLTGEHLLDRLLSEPTVTRVLAPTRKPLAEHSHLENPVGELATLLP
CCCCCCHHEEECCCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHH
TLSGRVDIAFCCLGTTIKQAGSQDAFKAVDLDMVTAFASRARELGARHLLVISAVGADPQ
HHCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCC
SSTFYNRVKGEMEQALRAQGWPQLTIARPSLLVGSRPETRWVEQLAAPIAKLIPGKYGAI
CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCHHHHHHHHHHHHHHHCCCCCCHH
EACHLARALWRLALEEQNGERIVESDELRKLGK
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MYLTPQHILLAGATGLTGEHLLDRLLSEPTVTRVLAPTRKPLAEHSHLENPVGELATLLP
CCCCCCHHEEECCCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHH
TLSGRVDIAFCCLGTTIKQAGSQDAFKAVDLDMVTAFASRARELGARHLLVISAVGADPQ
HHCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCC
SSTFYNRVKGEMEQALRAQGWPQLTIARPSLLVGSRPETRWVEQLAAPIAKLIPGKYGAI
CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCHHHHHHHHHHHHHHHCCCCCCHH
EACHLARALWRLALEEQNGERIVESDELRKLGK
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]