| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is eutB [H]
Identifier: 66043895
GI number: 66043895
Start: 716978
End: 718372
Strand: Reverse
Name: eutB [H]
Synonym: Psyr_0628
Alternate gene names: 66043895
Gene position: 718372-716978 (Counterclockwise)
Preceding gene: 66043896
Following gene: 66043894
Centisome position: 11.79
GC content: 62.37
Gene sequence:
>1395_bases ATGGCGAGCTTTTCCCATTCTGTCGGTGCGCAGACGTACCGCTTCGACAGCCTCAAAGAAGTCATGGCCAAGGCCAGTCC TGCGCGCTCCGGTGATTATCTGGCCGAAGTCGCGGCGCAGAATGACGGCGAACGGGTCGCTGCGCAGATGGCGCTGGCGA ATATTCCGCTCAAGCACTTTCTTGAAGAAGCCCTGATTCCCTATGAACAGGACGAAGTCACCCGGCTGATCATCGATACC CACGACAAACTGGCGTTCGCTCCGGTCAGTCATCTGACAGTCGGCGGCTTTCGCGACTGGCTGCTCAGCGACAAGGCTGA CGAAACCAGTCTGCGCGCACTGGCCCCCGGCCTGACCCCGGAAATGGCCGCCGCCGTTTCAAAGATCATGCGCGTGCAGG ATCTGGTGCTGGTGGCGCAGAAAATCCGCGTGGTCACGCGCTTCCGTAACACCATGGGCCTGCGCGGCCGGCTGTCGACA CGCCTGCAACCCAATCACCCCACCGACGACCCGTCCGGCATTGCCGCCAGCGTGCTCGACGGCCTGCTGTACGGCAATGG CGATGCCATGATCGGCATCAACCCGGCCACCGACAGCACCTCGTCCATCGTCGCCCTGCTGGAAATGCTCGACGCCATCG TCCAGCGCTATGAAATACCGACCCAGTCCTGCGTACTGACCCACGTCACCACCTCCATTGAAGTGATCAACCGTGGCGTG CCGGTCGATCTGGTGTTTCAGTCGATCACCGGCACTGAGGCCGCCAACGCCAGCTTCGGCATCAGCCTCAAGCTGTTGCA GGAAGGCTATGAAGCGGGCCTGAGCCTGAATCGCGGCACCCTCGGGCAAAACCTGATGTATTTCGAGACCGGACAAGGCA GCGCGCTGTCGGCCAACGCGCATCATGGCGTCGACCAGCAGACCTGCGAGACCCGCGCCTACGCCGTCGCCCGGCATTTC AACCCGTTTCTGGTCAACACCGTGGTCGGTTTCATCGGCCCCGAGTACCTGTACAACGGCAAACAGATCATCCGCGCCGG TCTGGAGGATCACTTCTGCGGCAAGCTGCTGGGCGTGCCGATGGGCTGTGACATCTGCTACACCAACCACGCAGAGGCCG ATCAGGACGACATGGACACCCTGCTGACCCTGCTGGGCGTCGCGGGGATCAACTTCATCATGGGCATCCCCGGCTCCGAC GACATCATGCTCAACTACCAGACCACCTCGTTCCACGACGCGCTGTACGCCAGGCAAAGCCTGGGCCTGCGTCCTGCGCC GGAATACGAAGCCTGGCTGGAAAAAATGGGCATCTTCACCCAGGCCGACGGCCGTGTGCGCTTCGGCGACAGCCTGCCGC CAGCCTTCCGTCAGGCGCTGGCGCATCTAGCATGA
Upstream 100 bases:
>100_bases TTGCTTACGTTGCTTCCCATAGTCGTTTGAACCGGGACGTCACCGGTTCGACCGAAAGACCACGTCCGACGCGAACAGCG CGACGTCATGGAGAATCTGT
Downstream 100 bases:
>100_bases GTGACGAGCCGATGAACGAACTACAAGACAGCGCCGCCCCCGCCAATCCATGGCTGGAACTGCGCCGCCTGACCCCTGCG CGTATTGCGCTGGGGCGTAC
Product: ethanolamine ammonia lyase large subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase large subunit [H]
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MASFSHSVGAQTYRFDSLKEVMAKASPARSGDYLAEVAAQNDGERVAAQMALANIPLKHFLEEALIPYEQDEVTRLIIDT HDKLAFAPVSHLTVGGFRDWLLSDKADETSLRALAPGLTPEMAAAVSKIMRVQDLVLVAQKIRVVTRFRNTMGLRGRLST RLQPNHPTDDPSGIAASVLDGLLYGNGDAMIGINPATDSTSSIVALLEMLDAIVQRYEIPTQSCVLTHVTTSIEVINRGV PVDLVFQSITGTEAANASFGISLKLLQEGYEAGLSLNRGTLGQNLMYFETGQGSALSANAHHGVDQQTCETRAYAVARHF NPFLVNTVVGFIGPEYLYNGKQIIRAGLEDHFCGKLLGVPMGCDICYTNHAEADQDDMDTLLTLLGVAGINFIMGIPGSD DIMLNYQTTSFHDALYARQSLGLRPAPEYEAWLEKMGIFTQADGRVRFGDSLPPAFRQALAHLA
Sequences:
>Translated_464_residues MASFSHSVGAQTYRFDSLKEVMAKASPARSGDYLAEVAAQNDGERVAAQMALANIPLKHFLEEALIPYEQDEVTRLIIDT HDKLAFAPVSHLTVGGFRDWLLSDKADETSLRALAPGLTPEMAAAVSKIMRVQDLVLVAQKIRVVTRFRNTMGLRGRLST RLQPNHPTDDPSGIAASVLDGLLYGNGDAMIGINPATDSTSSIVALLEMLDAIVQRYEIPTQSCVLTHVTTSIEVINRGV PVDLVFQSITGTEAANASFGISLKLLQEGYEAGLSLNRGTLGQNLMYFETGQGSALSANAHHGVDQQTCETRAYAVARHF NPFLVNTVVGFIGPEYLYNGKQIIRAGLEDHFCGKLLGVPMGCDICYTNHAEADQDDMDTLLTLLGVAGINFIMGIPGSD DIMLNYQTTSFHDALYARQSLGLRPAPEYEAWLEKMGIFTQADGRVRFGDSLPPAFRQALAHLA >Mature_463_residues ASFSHSVGAQTYRFDSLKEVMAKASPARSGDYLAEVAAQNDGERVAAQMALANIPLKHFLEEALIPYEQDEVTRLIIDTH DKLAFAPVSHLTVGGFRDWLLSDKADETSLRALAPGLTPEMAAAVSKIMRVQDLVLVAQKIRVVTRFRNTMGLRGRLSTR LQPNHPTDDPSGIAASVLDGLLYGNGDAMIGINPATDSTSSIVALLEMLDAIVQRYEIPTQSCVLTHVTTSIEVINRGVP VDLVFQSITGTEAANASFGISLKLLQEGYEAGLSLNRGTLGQNLMYFETGQGSALSANAHHGVDQQTCETRAYAVARHFN PFLVNTVVGFIGPEYLYNGKQIIRAGLEDHFCGKLLGVPMGCDICYTNHAEADQDDMDTLLTLLGVAGINFIMGIPGSDD IMLNYQTTSFHDALYARQSLGLRPAPEYEAWLEKMGIFTQADGRVRFGDSLPPAFRQALAHLA
Specific function: Ethanolamine utilization. [C]
COG id: COG4303
COG function: function code E; Ethanolamine ammonia-lyase, large subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082106, Length=442, Percent_Identity=50.9049773755656, Blast_Score=452, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010628 [H]
Pfam domain/function: PF06751 EutB [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 50349; Mature: 50218
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFSHSVGAQTYRFDSLKEVMAKASPARSGDYLAEVAAQNDGERVAAQMALANIPLKHF CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHH LEEALIPYEQDEVTRLIIDTHDKLAFAPVSHLTVGGFRDWLLSDKADETSLRALAPGLTP HHHHCCCCCCCHHHEEEEECCCCEEECCHHHHECCCHHHHHHCCCCCHHHHHHHCCCCCH EMAAAVSKIMRVQDLVLVAQKIRVVTRFRNTMGLRGRLSTRLQPNHPTDDPSGIAASVLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH GLLYGNGDAMIGINPATDSTSSIVALLEMLDAIVQRYEIPTQSCVLTHVTTSIEVINRGV HHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC PVDLVFQSITGTEAANASFGISLKLLQEGYEAGLSLNRGTLGQNLMYFETGQGSALSANA CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCC HHGVDQQTCETRAYAVARHFNPFLVNTVVGFIGPEYLYNGKQIIRAGLEDHFCGKLLGVP CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHCCHHHHHHCCCHHHHHHHHCCC MGCDICYTNHAEADQDDMDTLLTLLGVAGINFIMGIPGSDDIMLNYQTTSFHDALYARQS CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCHHHHHHHHHHH LGLRPAPEYEAWLEKMGIFTQADGRVRFGDSLPPAFRQALAHLA CCCCCCCHHHHHHHHHCCEEECCCCEEECCCCCHHHHHHHHHCC >Mature Secondary Structure ASFSHSVGAQTYRFDSLKEVMAKASPARSGDYLAEVAAQNDGERVAAQMALANIPLKHF CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHH LEEALIPYEQDEVTRLIIDTHDKLAFAPVSHLTVGGFRDWLLSDKADETSLRALAPGLTP HHHHCCCCCCCHHHEEEEECCCCEEECCHHHHECCCHHHHHHCCCCCHHHHHHHCCCCCH EMAAAVSKIMRVQDLVLVAQKIRVVTRFRNTMGLRGRLSTRLQPNHPTDDPSGIAASVLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH GLLYGNGDAMIGINPATDSTSSIVALLEMLDAIVQRYEIPTQSCVLTHVTTSIEVINRGV HHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC PVDLVFQSITGTEAANASFGISLKLLQEGYEAGLSLNRGTLGQNLMYFETGQGSALSANA CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCC HHGVDQQTCETRAYAVARHFNPFLVNTVVGFIGPEYLYNGKQIIRAGLEDHFCGKLLGVP CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHCCHHHHHHCCCHHHHHHHHCCC MGCDICYTNHAEADQDDMDTLLTLLGVAGINFIMGIPGSDDIMLNYQTTSFHDALYARQS CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCHHHHHHHHHHH LGLRPAPEYEAWLEKMGIFTQADGRVRFGDSLPPAFRQALAHLA CCCCCCCHHHHHHHHHCCEEECCCCEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]