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The map label for this gene is prtR [H]

Identifier: 66043890

GI number: 66043890

Start: 712693

End: 713424

Strand: Reverse

Name: prtR [H]

Synonym: Psyr_0623

Alternate gene names: 66043890

Gene position: 713424-712693 (Counterclockwise)

Preceding gene: 66043891

Following gene: 66043889

Centisome position: 11.71

GC content: 59.43

Gene sequence:

>732_bases
ATGAATACATCAGGTGATCGACTCCGCATCCTCCTTCGGGAGTGCCATCTCACAGCGACTGATTTTGCCGCCAACCGCAA
AATCACGCCGCAACACGTCAATAACTGGTTCAAGCGCGGCGTGCCCATGGCGCGGATTGACGAGGTGGCTGAACTGTTGA
CCGTCAACGCCCGCTGGCTGCGCACCGGCGAAGGCCCCAAACACCCTAACGAATGCGCCAATGAAAACACCGCCGGCGAT
ACTCGCGTCATCATTCATCAGGCCAGAAACGTGTCGCGCGGCGATGTGGAAATCCAGATTTTCATGGAAGCCGAATCCAC
CCACGGCGTCGGCAAGACCGTCCTCGCCGAAGCCCTCGGACAGAAAATTCGCCTGCCCCTGCAAGTCCTGCAGAACATGG
GCATCGACCCGAAAAACTGCATGTGTGTGGCCATGGTCGGTAACAGCATGGCCGACAAGATTCAGGACGGCTCGATCCTC
GGCGTCGACCGCGAGCTGACTCAGGTCATCGACGGCGAAATCTACGCCCTCGAACACGGCGGCATCCTGCGCGTCCGCTA
CCTCTACCGCCTGCCCAACGGCGGCCTGCGCCTGCGCAGCCACAACGACGCCGAATACCCGGACGAACTGTTCAGCGCCG
AAGACATTGACCGGGAGAAAATACGGATTCTGGGCTGGATATTCTGGTGGTCGACCCTGAACAGCCGACGCAATGCCATG
CTGCTGTTATGA

Upstream 100 bases:

>100_bases
TCCATCCGTAGTCCGGATAGCCACGCCCACCCTGGGATAACGTCGACGTCAACACCTCGTTCATTTAAACGCCCCGGCGA
CGCCCGTAGACTTCGCCACT

Downstream 100 bases:

>100_bases
AGCGTTTACGGCTGAAAGGCATTCGGGCTGGGCATGGGAGGCGAAGTTCAGTATCCTGTTCGCCATCCAGAGCACCTGAC
GCAGTCATGCGATGCGGTGT

Product: peptidase S24, S26A and S26B

Products: NA

Alternate protein names: Pyocin repressor protein [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNTSGDRLRILLRECHLTATDFAANRKITPQHVNNWFKRGVPMARIDEVAELLTVNARWLRTGEGPKHPNECANENTAGD
TRVIIHQARNVSRGDVEIQIFMEAESTHGVGKTVLAEALGQKIRLPLQVLQNMGIDPKNCMCVAMVGNSMADKIQDGSIL
GVDRELTQVIDGEIYALEHGGILRVRYLYRLPNGGLRLRSHNDAEYPDELFSAEDIDREKIRILGWIFWWSTLNSRRNAM
LLL

Sequences:

>Translated_243_residues
MNTSGDRLRILLRECHLTATDFAANRKITPQHVNNWFKRGVPMARIDEVAELLTVNARWLRTGEGPKHPNECANENTAGD
TRVIIHQARNVSRGDVEIQIFMEAESTHGVGKTVLAEALGQKIRLPLQVLQNMGIDPKNCMCVAMVGNSMADKIQDGSIL
GVDRELTQVIDGEIYALEHGGILRVRYLYRLPNGGLRLRSHNDAEYPDELFSAEDIDREKIRILGWIFWWSTLNSRRNAM
LLL
>Mature_243_residues
MNTSGDRLRILLRECHLTATDFAANRKITPQHVNNWFKRGVPMARIDEVAELLTVNARWLRTGEGPKHPNECANENTAGD
TRVIIHQARNVSRGDVEIQIFMEAESTHGVGKTVLAEALGQKIRLPLQVLQNMGIDPKNCMCVAMVGNSMADKIQDGSIL
GVDRELTQVIDGEIYALEHGGILRVRYLYRLPNGGLRLRSHNDAEYPDELFSAEDIDREKIRILGWIFWWSTLNSRRNAM
LLL

Specific function: Represses the promoter activity of the prtN gene [H]

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF01381 HTH_3; PF00717 Peptidase_S24 [H]

EC number: NA

Molecular weight: Translated: 27482; Mature: 27482

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSGDRLRILLRECHLTATDFAANRKITPQHVNNWFKRGVPMARIDEVAELLTVNARWL
CCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHEE
RTGEGPKHPNECANENTAGDTRVIIHQARNVSRGDVEIQIFMEAESTHGVGKTVLAEALG
ECCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHH
QKIRLPLQVLQNMGIDPKNCMCVAMVGNSMADKIQDGSILGVDRELTQVIDGEIYALEHG
HHCCCHHHHHHHCCCCCCCCEEEEEECCHHHHHCCCCCEEECCHHHHHHHCCEEEEEECC
GILRVRYLYRLPNGGLRLRSHNDAEYPDELFSAEDIDREKIRILGWIFWWSTLNSRRNAM
CEEEEEEEEECCCCCEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
LLL
EEC
>Mature Secondary Structure
MNTSGDRLRILLRECHLTATDFAANRKITPQHVNNWFKRGVPMARIDEVAELLTVNARWL
CCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHEE
RTGEGPKHPNECANENTAGDTRVIIHQARNVSRGDVEIQIFMEAESTHGVGKTVLAEALG
ECCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHH
QKIRLPLQVLQNMGIDPKNCMCVAMVGNSMADKIQDGSILGVDRELTQVIDGEIYALEHG
HHCCCHHHHHHHCCCCCCCCEEEEEECCHHHHHCCCCCEEECCHHHHHHHCCEEEEEECC
GILRVRYLYRLPNGGLRLRSHNDAEYPDELFSAEDIDREKIRILGWIFWWSTLNSRRNAM
CEEEEEEEEECCCCCEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
LLL
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444788; 10984043 [H]