| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yghU [H]
Identifier: 66043876
GI number: 66043876
Start: 699376
End: 700218
Strand: Reverse
Name: yghU [H]
Synonym: Psyr_0609
Alternate gene names: 66043876
Gene position: 700218-699376 (Counterclockwise)
Preceding gene: 66043889
Following gene: 66043875
Centisome position: 11.49
GC content: 60.62
Gene sequence:
>843_bases ATGACCCAAACGTCCTACACCCCGCCGAAGGTCTGGCAGCAGGAAACAAAAGCGGGCGGCACGTTCGCCAGCATCAACCG GCCCGTCGCCGGCCCCACACACGACAAGGCGCTGCCGGTCGGCAAGCACCCGCTGCAGCTTTATTCACTGGCCACCCCCA ACGGTGTGAAAGTCGCGATCATGCTCGAAGAGCTGCTGGCGCTCGGGCACAGCGGTGCGGAATACGATGCCTGGCTGATC CGTATCTCCGAGGGCGATCAGTTCTCCAGCGGTTTTGTCGAGATCAATCCCAATTCCAAGATCCCGGCATTGCTGGATCG AAGCCATGAAACACCTGTTCGGGTATTCGAGTCCGGCTCTATCCTGCTGTACCTGGCCGAAAAGTTTTCCAGCTTCCTGC CCGCCGACCCGGCAGGCCGAACCGAAACGCTGAACTGGCTGTTCTGGCAGATGGGCGCTGCGCCGTATCTGGGCGGCGGT TTCGGGCATTTCTATGCCTACGCGCCGGAGAAACTCGAATACCCCATCAATCGGTTCGCGATGGAGGCCAAGCGCCAACT CGATGTGCTGAACCGTCGCCTGGGCGAGCACCGCTACCTGGCCGGCGACACCTACACGATTGCCGATATCGCGGTCTGGC CATGGTATGGCGCACTGGTGCAGAACAAGGTGTACTCGGCTGCCGAATTCCTCTCGGTACACGAATACCCGCACCTGATT CGCTGGACAGAAGAAATCGCCGCACGCCCTGCCGTCATCAGAGGCCAGAAGGTCAACCGCACCTGGGGCGAAGAAGCCGA TCAGGTTCCGGAGCGGCATCAGGCGTCCGATCTGGATAAATAA
Upstream 100 bases:
>100_bases ATCGCAAGGCACTTCCCAGCCCGTACGTTGATCTATAACGTCTATGGTCCTTTGCAACACGACCGGTCCAGCGAACACCC TTGAACAAGCGAGGCTCCTC
Downstream 100 bases:
>100_bases GGCACACGTCAAGTCCTTCGCGGACAGAAACCTGATGCTACAAACCCACAGGAAACTCTGGAAAAGAACGTCCTGATCTG CACGTAAAGTAGCCGACCTT
Product: putative glutathione S-transferase YghU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTQTSYTPPKVWQQETKAGGTFASINRPVAGPTHDKALPVGKHPLQLYSLATPNGVKVAIMLEELLALGHSGAEYDAWLI RISEGDQFSSGFVEINPNSKIPALLDRSHETPVRVFESGSILLYLAEKFSSFLPADPAGRTETLNWLFWQMGAAPYLGGG FGHFYAYAPEKLEYPINRFAMEAKRQLDVLNRRLGEHRYLAGDTYTIADIAVWPWYGALVQNKVYSAAEFLSVHEYPHLI RWTEEIAARPAVIRGQKVNRTWGEEADQVPERHQASDLDK
Sequences:
>Translated_280_residues MTQTSYTPPKVWQQETKAGGTFASINRPVAGPTHDKALPVGKHPLQLYSLATPNGVKVAIMLEELLALGHSGAEYDAWLI RISEGDQFSSGFVEINPNSKIPALLDRSHETPVRVFESGSILLYLAEKFSSFLPADPAGRTETLNWLFWQMGAAPYLGGG FGHFYAYAPEKLEYPINRFAMEAKRQLDVLNRRLGEHRYLAGDTYTIADIAVWPWYGALVQNKVYSAAEFLSVHEYPHLI RWTEEIAARPAVIRGQKVNRTWGEEADQVPERHQASDLDK >Mature_279_residues TQTSYTPPKVWQQETKAGGTFASINRPVAGPTHDKALPVGKHPLQLYSLATPNGVKVAIMLEELLALGHSGAEYDAWLIR ISEGDQFSSGFVEINPNSKIPALLDRSHETPVRVFESGSILLYLAEKFSSFLPADPAGRTETLNWLFWQMGAAPYLGGGF GHFYAYAPEKLEYPINRFAMEAKRQLDVLNRRLGEHRYLAGDTYTIADIAVWPWYGALVQNKVYSAAEFLSVHEYPHLIR WTEEIAARPAVIRGQKVNRTWGEEADQVPERHQASDLDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=279, Percent_Identity=68.8172043010753, Blast_Score=406, Evalue=1e-115, Organism=Escherichia coli, GI1788640, Length=213, Percent_Identity=41.3145539906103, Blast_Score=149, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6324100, Length=259, Percent_Identity=28.957528957529, Blast_Score=100, Evalue=2e-22, Organism=Drosophila melanogaster, GI17864598, Length=179, Percent_Identity=29.0502793296089, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI28571670, Length=179, Percent_Identity=28.4916201117318, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI17864592, Length=209, Percent_Identity=28.2296650717703, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 31399; Mature: 31268
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTSYTPPKVWQQETKAGGTFASINRPVAGPTHDKALPVGKHPLQLYSLATPNGVKVAI CCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEH MLEELLALGHSGAEYDAWLIRISEGDQFSSGFVEINPNSKIPALLDRSHETPVRVFESGS HHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHHHCCCCCCCEEEEECCC ILLYLAEKFSSFLPADPAGRTETLNWLFWQMGAAPYLGGGFGHFYAYAPEKLEYPINRFA EEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHEEECCHHHCCCHHHHH MEAKRQLDVLNRRLGEHRYLAGDTYTIADIAVWPWYGALVQNKVYSAAEFLSVHEYPHLI HHHHHHHHHHHHHHCCCEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHH RWTEEIAARPAVIRGQKVNRTWGEEADQVPERHQASDLDK HHHHHHHCCCCEECCCCCCCCCCCHHHHCCHHHHHCCCCC >Mature Secondary Structure TQTSYTPPKVWQQETKAGGTFASINRPVAGPTHDKALPVGKHPLQLYSLATPNGVKVAI CCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEH MLEELLALGHSGAEYDAWLIRISEGDQFSSGFVEINPNSKIPALLDRSHETPVRVFESGS HHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHHHCCCCCCCEEEEECCC ILLYLAEKFSSFLPADPAGRTETLNWLFWQMGAAPYLGGGFGHFYAYAPEKLEYPINRFA EEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHEEECCHHHCCCHHHHH MEAKRQLDVLNRRLGEHRYLAGDTYTIADIAVWPWYGALVQNKVYSAAEFLSVHEYPHLI HHHHHHHHHHHHHHCCCEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHH RWTEEIAARPAVIRGQKVNRTWGEEADQVPERHQASDLDK HHHHHHHCCCCEECCCCCCCCCCCHHHHCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]