| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yhiN [H]
Identifier: 66043782
GI number: 66043782
Start: 571412
End: 572590
Strand: Reverse
Name: yhiN [H]
Synonym: Psyr_0515
Alternate gene names: 66043782
Gene position: 572590-571412 (Counterclockwise)
Preceding gene: 66043783
Following gene: 66043781
Centisome position: 9.4
GC content: 60.9
Gene sequence:
>1179_bases GTGCCCGTTACTGACGTTGTAATCATTGGCGCCGGCGCTGCCGGTCTGATGTGTGCGTTCACCGCTGCCGCTCGCGGGCG CAAGGTGATGTTGATCGACCACGCCAACAAACCCGGCAAGAAGATCCTGATGTCCGGTGGCGGGCGGTGCAACTTCACCA ATATGTACACCGAGCCGGCCAACTTCCTGTCGCAGAACCCGCATTTCTGCAAATCGGCCCTGGCCCGCTACACCCAATGG GATTTCATCGCGATGGTCGCCAAACATGGCGTGCCTTATCACGAGAAAAAGCTCGGCCAGCTGTTTTGCGACAACAAGTC CAGCGACATTCTGGAAATGCTTCTGGAAGAATGCCGACAAGCCGGTGTCAGCCTGCACATGGACACCGCCGTGCAGCAGA TCGAAAAAACCGACGACGGCTACAGCCTGCAGACCACGCTGGGCACCCTGAACTGCCAGTCGCTGGTGATTGCCACGGGC GGGCTGTCGATTCCGACGCTGGGCGCCACCGGTTTTGGCTATCAGGTCGGCAAGCAGTTCGGCCACACGCTGCTGCCGAC CCGTGCCGGGCTGGTGCCGTTCACCATCACCGATCAGCTCAAGGAGCTGTGCACCGAGCTGTCAGGCACCTCGGTGGATT GCCTGGTGAGCTGCAACGACACCAGCTTCCGCGAAAACATCCTGTTCACCCACCGCGGCCTCAGTGGCCCGGCGATCCTG CAGATTTCCTCGTTCTGGCAGCCCGGCGACACCGTGGAAATCAACCTGCTGCCCGATCATGACGTGCCCGCCTGGCTCAA CCAGCAGCAGGCCGAGCGCCCCAACAGTGAACTGAAAACCCTGCTGGGCGAGATTTTCACCAAGAAGATGGCCAACCTGA TCGCCGAACACTGGTTCGTTTCCAGACCGATGAAGCAGTACACCCACGCCGAACTGGCCGAGATCGCCGAAAAGCTGGCG AGCTGGCAGGTGGTCCCGGCGGGCACCGAGGGTTATCGCACGGCCGAAGTGACGCTGGGCGGTATCGACACCCGCGAAGT GTCGTCCAAGACCATGGAATCGCTGAAATCCCCCGGTCTTTATTTCGTGGGCGAAGTGCTCGACGTGAGCGGTCATCTGG GCGGTTTCAACTTTCAGTGGGCGTGGGCCTCGGCCTATGCTGCCGCACACTACGTGTGA
Upstream 100 bases:
>100_bases CGGTTTTCAGGCTTCTGCGGCCAGAATCAAAAACAGGCTTGTGCATAGCTTGGCGCGGAGCATGGGAACGATCGTGACCT GAAGATCGAGGAACCACGCT
Downstream 100 bases:
>100_bases CCTGGTCGCTGATATGCAACATCACGACACGGCAAACCGGTATAAATTTTGCGAGGCGGATGTACAGCCAGTCATTTGGT CTGTACATATCCTCCTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MPVTDVVIIGAGAAGLMCAFTAAARGRKVMLIDHANKPGKKILMSGGGRCNFTNMYTEPANFLSQNPHFCKSALARYTQW DFIAMVAKHGVPYHEKKLGQLFCDNKSSDILEMLLEECRQAGVSLHMDTAVQQIEKTDDGYSLQTTLGTLNCQSLVIATG GLSIPTLGATGFGYQVGKQFGHTLLPTRAGLVPFTITDQLKELCTELSGTSVDCLVSCNDTSFRENILFTHRGLSGPAIL QISSFWQPGDTVEINLLPDHDVPAWLNQQQAERPNSELKTLLGEIFTKKMANLIAEHWFVSRPMKQYTHAELAEIAEKLA SWQVVPAGTEGYRTAEVTLGGIDTREVSSKTMESLKSPGLYFVGEVLDVSGHLGGFNFQWAWASAYAAAHYV
Sequences:
>Translated_392_residues MPVTDVVIIGAGAAGLMCAFTAAARGRKVMLIDHANKPGKKILMSGGGRCNFTNMYTEPANFLSQNPHFCKSALARYTQW DFIAMVAKHGVPYHEKKLGQLFCDNKSSDILEMLLEECRQAGVSLHMDTAVQQIEKTDDGYSLQTTLGTLNCQSLVIATG GLSIPTLGATGFGYQVGKQFGHTLLPTRAGLVPFTITDQLKELCTELSGTSVDCLVSCNDTSFRENILFTHRGLSGPAIL QISSFWQPGDTVEINLLPDHDVPAWLNQQQAERPNSELKTLLGEIFTKKMANLIAEHWFVSRPMKQYTHAELAEIAEKLA SWQVVPAGTEGYRTAEVTLGGIDTREVSSKTMESLKSPGLYFVGEVLDVSGHLGGFNFQWAWASAYAAAHYV >Mature_391_residues PVTDVVIIGAGAAGLMCAFTAAARGRKVMLIDHANKPGKKILMSGGGRCNFTNMYTEPANFLSQNPHFCKSALARYTQWD FIAMVAKHGVPYHEKKLGQLFCDNKSSDILEMLLEECRQAGVSLHMDTAVQQIEKTDDGYSLQTTLGTLNCQSLVIATGG LSIPTLGATGFGYQVGKQFGHTLLPTRAGLVPFTITDQLKELCTELSGTSVDCLVSCNDTSFRENILFTHRGLSGPAILQ ISSFWQPGDTVEINLLPDHDVPAWLNQQQAERPNSELKTLLGEIFTKKMANLIAEHWFVSRPMKQYTHAELAEIAEKLAS WQVVPAGTEGYRTAEVTLGGIDTREVSSKTMESLKSPGLYFVGEVLDVSGHLGGFNFQWAWASAYAAAHYV
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=377, Percent_Identity=54.3766578249337, Blast_Score=437, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 42800; Mature: 42669
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTDVVIIGAGAAGLMCAFTAAARGRKVMLIDHANKPGKKILMSGGGRCNFTNMYTEPA CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCCCH NFLSQNPHFCKSALARYTQWDFIAMVAKHGVPYHEKKLGQLFCDNKSSDILEMLLEECRQ HHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH AGVSLHMDTAVQQIEKTDDGYSLQTTLGTLNCQSLVIATGGLSIPTLGATGFGYQVGKQF CCCEEEHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHC GHTLLPTRAGLVPFTITDQLKELCTELSGTSVDCLVSCNDTSFRENILFTHRGLSGPAIL CCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCEEEEECCCCCCEEE QISSFWQPGDTVEINLLPDHDVPAWLNQQQAERPNSELKTLLGEIFTKKMANLIAEHWFV EEECCCCCCCEEEEEEECCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SRPMKQYTHAELAEIAEKLASWQVVPAGTEGYRTAEVTLGGIDTREVSSKTMESLKSPGL HCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC YFVGEVLDVSGHLGGFNFQWAWASAYAAAHYV EEEHHHHHCCCCCCCCCEEEHHHHHHHHHCCC >Mature Secondary Structure PVTDVVIIGAGAAGLMCAFTAAARGRKVMLIDHANKPGKKILMSGGGRCNFTNMYTEPA CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCCCH NFLSQNPHFCKSALARYTQWDFIAMVAKHGVPYHEKKLGQLFCDNKSSDILEMLLEECRQ HHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH AGVSLHMDTAVQQIEKTDDGYSLQTTLGTLNCQSLVIATGGLSIPTLGATGFGYQVGKQF CCCEEEHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHC GHTLLPTRAGLVPFTITDQLKELCTELSGTSVDCLVSCNDTSFRENILFTHRGLSGPAIL CCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCEEEEECCCCCCEEE QISSFWQPGDTVEINLLPDHDVPAWLNQQQAERPNSELKTLLGEIFTKKMANLIAEHWFV EEECCCCCCCEEEEEEECCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SRPMKQYTHAELAEIAEKLASWQVVPAGTEGYRTAEVTLGGIDTREVSSKTMESLKSPGL HCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC YFVGEVLDVSGHLGGFNFQWAWASAYAAAHYV EEEHHHHHCCCCCCCCCEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]