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The map label for this gene is yccS [H]

Identifier: 66043781

GI number: 66043781

Start: 569076

End: 571274

Strand: Reverse

Name: yccS [H]

Synonym: Psyr_0514

Alternate gene names: 66043781

Gene position: 571274-569076 (Counterclockwise)

Preceding gene: 66043782

Following gene: 66043779

Centisome position: 9.37

GC content: 62.66

Gene sequence:

>2199_bases
ATGGCATCGAAATCTCTCCGTCATACATTCCGTCGATTGTGGGCGCTGGATAAATTCAGCTATAGCGTTCGAGTCTTTAT
CGCACTGACCGGCAGCATGGCACTGTGCTGGTATCAAAATGAAATGGCGTTACTGATCCCGCTGTTTCTGGGGATTATCG
CCTGCGCCCTGGCCGAGACCGACGACAGCTGGCAGGGCCGACTCAACGCACTGGCCGTGACACTGGTGTGTTTCAGCATC
GCCGCCCTCGCCGTCGAATTGCTCTTCCCCTACCCCATCCTGTTTGTCTGTTCACTGGCGCTGGCCAGCTTCTGCCTGAC
CATGCTCGGCGCACTGGGTGAACGCTATGGCGCGATTGCCTACGGCACGTTGATCCTTTCGGTCTACACCATGATCGGCG
TCGATCAGCGTGGCGGTGAAGTACTGGACTTCTGGCACGAACCGATGCTGCTGGTGGCGGGCGCAGCCTGGTACGGCCTG
CTGTCGGTGCTCTGGCAGATGCTGTTCTCCAACCAGCCGGTGCAACAGGCGCTGGCGCGACTGTTTCGTGAGCTGGGCCA
GTACCTGAAGCTCAAGTCGACCCTGTTCGAACCGATTCGCACGCTCAACGTGGAGGCCCGTCGCCTGGAGCTGGCGCAGC
AGAACGGCAAAGTCGTCGCCGCGCTGAACTCCACCAAGGAAATCATCCTGCACCGCGTCGGCAGCGGCCGCCCCGGCTCC
AAGGTCAGCCGCTACCTGAAGCTGTACTTCATCGCCCAGGACATCCACGAGCGCGCCAGCTCGTCGCATTACCCCTACAA
CTCACTGGCCGATGCGTTTTTCCATAGCGACGTGCTGTTCCGCTGCCAGCGCCTGCTGCGTCAACAGGGCGTCGCCTGCC
AGGCGCTGTCGGAATCCATCCAGTTACGTCAGCCATTCGTGTATGACCCAAGCTTCGCCGAAGCCATGGAAGACCTGCAC
GCGTCCCTTGAACATCTGCGCATCCAGAGCAACCCTGCGTGGCGCGGCCTGCTGCGTTCGCTGCGCGCGCTGGCCGCCAA
CCTTGGCACCCTGGATCGCCTGATCAGCGACGCCAGCAACCCGGACGCCGTGGCCGATGCCACCGACAGCAGCCTGCTGG
ACCGCTCGCCGCGCAACCTCAAGGATGTCTGGACGCGCCTGCGCCTGCAGATGACCCCGACCTCGCTGCTGTTTCGTCAC
GCCCTGCGCCTGCCGCTGGCATTGACCATCGGTTACGCGATGGTGCACCTGATTCACCCGTCACAGGGCTACTGGATCAT
CCTGACCACGGTGTTCGTCTGCCAGCCCAGCTACGGCGCCACCCGGCTCAAGCTCGGCCAGCGGATCATCGGCACCGCGA
TCGGCCTGACGGTCGGCTGGGTGCTGTTCGATCTGGTTACCAGCCCGATTCTGCAATCGATGTGCGCCGTGCTGGCCGGG
GTGGTGTTCTTCGTCAACCGGACCACGCGCTACACCCTGTCGACCGCCGCCATCACGGTGATGGTGCTGTTCTGCTTCAA
TCAGGTCGGTGATGGTTATGGCCTGTTCCTGCCGCGGCTGTTCGATACATTGCTGGGCAGCCTTATCGCCGGTCTCGCCG
TGTTCCTGTTTTTGCCGGACTGGCAGGGACGACGCCTGAACAAGGTGCTGGCCAATACCCTGACCTGCAACAGCATCTAC
CTGCGGCAGATCATGCAACAGTACGCCAAGGGCAAGAGTGACGACCTGGCCTATCGACTGGCGCGGCGCAACGCCCACAA
CGCCGACGCCGCGCTGTCGACCACGCTGGCGAACATGCTCATGGAGCCCGGCCACTTTCGCAAGGAGGCCGACGTCGGCT
TCCGCTTTCTGGTGCTGTCACACACGCTGCTGAGCTACCTTTCCGGCCTCGGCGCGCACCGTGATACGCAGTTGCCGAGT
GATGTCCGCGAACACCTGATCGATAACGTCGGTGCCACACTGGCCGCCAGCATCGACGAAATCGCTGCAGGGCTAGCCGA
GAAGAAGCCGGTTGCGGTGCAGAGCGATGCCGAGGAAGGGCTGGCCGCGCAACTGGAGCAACTGCCCGAAGACATGGACG
AAAGTCAGCGACTGGTGCAAGCCCAGCTGGCGCTGATCTGCCGCCAGCTGGCTCCGCTGCGCACCCTCGCCGCGCACTTG
ATCAAAGCTCCGGAGGTTGCTGCAACCCATGCAGTCTGA

Upstream 100 bases:

>100_bases
CGGTATAAATTTTGCGAGGCGGATGTACAGCCAGTCATTTGGTCTGTACATATCCTCCTGCACGATCGATCAATTGCGAA
CAGGGCCGTCAAGCTAACCC

Downstream 100 bases:

>100_bases
GCAGCTCATCGTAGGTGCCGTCGGCTTTCATAGCGGCAATTTCGCGATCAAAGTCGGCGACGATCTTGTCGTGGTGGGGA
TTTTTCAGGCTGACCAGAAT

Product: intergral membrane protein, YccS:integral membrane protein, YccS/YhfK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 732; Mature: 731

Protein sequence:

>732_residues
MASKSLRHTFRRLWALDKFSYSVRVFIALTGSMALCWYQNEMALLIPLFLGIIACALAETDDSWQGRLNALAVTLVCFSI
AALAVELLFPYPILFVCSLALASFCLTMLGALGERYGAIAYGTLILSVYTMIGVDQRGGEVLDFWHEPMLLVAGAAWYGL
LSVLWQMLFSNQPVQQALARLFRELGQYLKLKSTLFEPIRTLNVEARRLELAQQNGKVVAALNSTKEIILHRVGSGRPGS
KVSRYLKLYFIAQDIHERASSSHYPYNSLADAFFHSDVLFRCQRLLRQQGVACQALSESIQLRQPFVYDPSFAEAMEDLH
ASLEHLRIQSNPAWRGLLRSLRALAANLGTLDRLISDASNPDAVADATDSSLLDRSPRNLKDVWTRLRLQMTPTSLLFRH
ALRLPLALTIGYAMVHLIHPSQGYWIILTTVFVCQPSYGATRLKLGQRIIGTAIGLTVGWVLFDLVTSPILQSMCAVLAG
VVFFVNRTTRYTLSTAAITVMVLFCFNQVGDGYGLFLPRLFDTLLGSLIAGLAVFLFLPDWQGRRLNKVLANTLTCNSIY
LRQIMQQYAKGKSDDLAYRLARRNAHNADAALSTTLANMLMEPGHFRKEADVGFRFLVLSHTLLSYLSGLGAHRDTQLPS
DVREHLIDNVGATLAASIDEIAAGLAEKKPVAVQSDAEEGLAAQLEQLPEDMDESQRLVQAQLALICRQLAPLRTLAAHL
IKAPEVAATHAV

Sequences:

>Translated_732_residues
MASKSLRHTFRRLWALDKFSYSVRVFIALTGSMALCWYQNEMALLIPLFLGIIACALAETDDSWQGRLNALAVTLVCFSI
AALAVELLFPYPILFVCSLALASFCLTMLGALGERYGAIAYGTLILSVYTMIGVDQRGGEVLDFWHEPMLLVAGAAWYGL
LSVLWQMLFSNQPVQQALARLFRELGQYLKLKSTLFEPIRTLNVEARRLELAQQNGKVVAALNSTKEIILHRVGSGRPGS
KVSRYLKLYFIAQDIHERASSSHYPYNSLADAFFHSDVLFRCQRLLRQQGVACQALSESIQLRQPFVYDPSFAEAMEDLH
ASLEHLRIQSNPAWRGLLRSLRALAANLGTLDRLISDASNPDAVADATDSSLLDRSPRNLKDVWTRLRLQMTPTSLLFRH
ALRLPLALTIGYAMVHLIHPSQGYWIILTTVFVCQPSYGATRLKLGQRIIGTAIGLTVGWVLFDLVTSPILQSMCAVLAG
VVFFVNRTTRYTLSTAAITVMVLFCFNQVGDGYGLFLPRLFDTLLGSLIAGLAVFLFLPDWQGRRLNKVLANTLTCNSIY
LRQIMQQYAKGKSDDLAYRLARRNAHNADAALSTTLANMLMEPGHFRKEADVGFRFLVLSHTLLSYLSGLGAHRDTQLPS
DVREHLIDNVGATLAASIDEIAAGLAEKKPVAVQSDAEEGLAAQLEQLPEDMDESQRLVQAQLALICRQLAPLRTLAAHL
IKAPEVAATHAV
>Mature_731_residues
ASKSLRHTFRRLWALDKFSYSVRVFIALTGSMALCWYQNEMALLIPLFLGIIACALAETDDSWQGRLNALAVTLVCFSIA
ALAVELLFPYPILFVCSLALASFCLTMLGALGERYGAIAYGTLILSVYTMIGVDQRGGEVLDFWHEPMLLVAGAAWYGLL
SVLWQMLFSNQPVQQALARLFRELGQYLKLKSTLFEPIRTLNVEARRLELAQQNGKVVAALNSTKEIILHRVGSGRPGSK
VSRYLKLYFIAQDIHERASSSHYPYNSLADAFFHSDVLFRCQRLLRQQGVACQALSESIQLRQPFVYDPSFAEAMEDLHA
SLEHLRIQSNPAWRGLLRSLRALAANLGTLDRLISDASNPDAVADATDSSLLDRSPRNLKDVWTRLRLQMTPTSLLFRHA
LRLPLALTIGYAMVHLIHPSQGYWIILTTVFVCQPSYGATRLKLGQRIIGTAIGLTVGWVLFDLVTSPILQSMCAVLAGV
VFFVNRTTRYTLSTAAITVMVLFCFNQVGDGYGLFLPRLFDTLLGSLIAGLAVFLFLPDWQGRRLNKVLANTLTCNSIYL
RQIMQQYAKGKSDDLAYRLARRNAHNADAALSTTLANMLMEPGHFRKEADVGFRFLVLSHTLLSYLSGLGAHRDTQLPSD
VREHLIDNVGATLAASIDEIAAGLAEKKPVAVQSDAEEGLAAQLEQLPEDMDESQRLVQAQLALICRQLAPLRTLAAHLI
KAPEVAATHAV

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=723, Percent_Identity=40.9405255878285, Blast_Score=509, Evalue=1e-145,
Organism=Escherichia coli, GI87082248, Length=606, Percent_Identity=23.7623762376238, Blast_Score=100, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81112; Mature: 80981

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKSLRHTFRRLWALDKFSYSVRVFIALTGSMALCWYQNEMALLIPLFLGIIACALAET
CCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCC
DDSWQGRLNALAVTLVCFSIAALAVELLFPYPILFVCSLALASFCLTMLGALGERYGAIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGTLILSVYTMIGVDQRGGEVLDFWHEPMLLVAGAAWYGLLSVLWQMLFSNQPVQQALAR
HHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LFRELGQYLKLKSTLFEPIRTLNVEARRLELAQQNGKVVAALNSTKEIILHRVGSGRPGS
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCHH
KVSRYLKLYFIAQDIHERASSSHYPYNSLADAFFHSDVLFRCQRLLRQQGVACQALSESI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
QLRQPFVYDPSFAEAMEDLHASLEHLRIQSNPAWRGLLRSLRALAANLGTLDRLISDASN
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDAVADATDSSLLDRSPRNLKDVWTRLRLQMTPTSLLFRHALRLPLALTIGYAMVHLIHP
CCCHHCCCCHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SQGYWIILTTVFVCQPSYGATRLKLGQRIIGTAIGLTVGWVLFDLVTSPILQSMCAVLAG
CCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFFVNRTTRYTLSTAAITVMVLFCFNQVGDGYGLFLPRLFDTLLGSLIAGLAVFLFLPD
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WQGRRLNKVLANTLTCNSIYLRQIMQQYAKGKSDDLAYRLARRNAHNADAALSTTLANML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
MEPGHFRKEADVGFRFLVLSHTLLSYLSGLGAHRDTQLPSDVREHLIDNVGATLAASIDE
HCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHH
IAAGLAEKKPVAVQSDAEEGLAAQLEQLPEDMDESQRLVQAQLALICRQLAPLRTLAAHL
HHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKAPEVAATHAV
HCCCCHHHCCCC
>Mature Secondary Structure 
ASKSLRHTFRRLWALDKFSYSVRVFIALTGSMALCWYQNEMALLIPLFLGIIACALAET
CCHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCC
DDSWQGRLNALAVTLVCFSIAALAVELLFPYPILFVCSLALASFCLTMLGALGERYGAIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGTLILSVYTMIGVDQRGGEVLDFWHEPMLLVAGAAWYGLLSVLWQMLFSNQPVQQALAR
HHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LFRELGQYLKLKSTLFEPIRTLNVEARRLELAQQNGKVVAALNSTKEIILHRVGSGRPGS
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCHH
KVSRYLKLYFIAQDIHERASSSHYPYNSLADAFFHSDVLFRCQRLLRQQGVACQALSESI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
QLRQPFVYDPSFAEAMEDLHASLEHLRIQSNPAWRGLLRSLRALAANLGTLDRLISDASN
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDAVADATDSSLLDRSPRNLKDVWTRLRLQMTPTSLLFRHALRLPLALTIGYAMVHLIHP
CCCHHCCCCHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SQGYWIILTTVFVCQPSYGATRLKLGQRIIGTAIGLTVGWVLFDLVTSPILQSMCAVLAG
CCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFFVNRTTRYTLSTAAITVMVLFCFNQVGDGYGLFLPRLFDTLLGSLIAGLAVFLFLPD
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WQGRRLNKVLANTLTCNSIYLRQIMQQYAKGKSDDLAYRLARRNAHNADAALSTTLANML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
MEPGHFRKEADVGFRFLVLSHTLLSYLSGLGAHRDTQLPSDVREHLIDNVGATLAASIDE
HCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHH
IAAGLAEKKPVAVQSDAEEGLAAQLEQLPEDMDESQRLVQAQLALICRQLAPLRTLAAHL
HHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKAPEVAATHAV
HCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]