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The map label for this gene is ygbL [H]

Identifier: 66043731

GI number: 66043731

Start: 502892

End: 503530

Strand: Reverse

Name: ygbL [H]

Synonym: Psyr_0464

Alternate gene names: 66043731

Gene position: 503530-502892 (Counterclockwise)

Preceding gene: 66043732

Following gene: 66043730

Centisome position: 8.26

GC content: 64.63

Gene sequence:

>639_bases
ATGATCGATGAAAACGCACTGCGTCAGGAAATCTGCGACGTCGGCCGTTTGCTGTATGGCCGCGGCTATACGGTGGGCAG
CGCCGGCAACATCAGCGCACGACTCGACGACGGCTGGCTGATTACCCCGACCGACGCCTGCCTGGGGCGCATGGACCCGG
CCGATATCGCCAAGGTCAATCTGGCCGGTGAATGGGTGTCTGGCAGCAAGCCGTCCAAAACCCTGGCCTTGCACCGCGAG
GTCTACGACCGCAATCCGCAGGTCGGTGGTGTGGTGCACACGCACTCGACGCATCTGGTCGCCCTGACCCTGGCCGGGGT
GTGGCAGGAAGACGACATTCTGCCGCCGCTGACGCCGTACCAGGTCATGAAGGTCGGGCATATCCCATTGATCCCTTACG
AGCGTCCGGGCTCGCCGAAAGTCGCCGAGCGCGTGGCGGAACTGGCCAACAGCGTGCGCGGCGTGATGCTGGAGCGCCTC
GGTCCGGTGGTCTGGGAAAGCTCGGTGGCCAAGGCCTGCTATGCCTTGGAGGAGCTGGAAGAGACTGCCCGTCTGTGGCT
GATGAGCAACCCCAAACCTGCACCGCTGGCCCCGGCGGCGCTTGAAGAGCTGCGTCAGGTGTTCGACGCCAGGTGGTAA

Upstream 100 bases:

>100_bases
GCAGCGGCGCACAACCGCTGGCCCTGGCCCTCAAATCCGGCAACTTCGGTGCGCGCGACTTCTTCGCCAAGGCGCTCAAG
CAACTGGCGGGGGCTGCCTG

Downstream 100 bases:

>100_bases
CGGACACACGGTGATCGCGAGGCGCACTGCGCCTCCCGGTCGAAAACAATAACAACAGGAATCGAGAGCATGACTCATCC
CTACCCCGCTGTTTCGTTGT

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MIDENALRQEICDVGRLLYGRGYTVGSAGNISARLDDGWLITPTDACLGRMDPADIAKVNLAGEWVSGSKPSKTLALHRE
VYDRNPQVGGVVHTHSTHLVALTLAGVWQEDDILPPLTPYQVMKVGHIPLIPYERPGSPKVAERVAELANSVRGVMLERL
GPVVWESSVAKACYALEELEETARLWLMSNPKPAPLAPAALEELRQVFDARW

Sequences:

>Translated_212_residues
MIDENALRQEICDVGRLLYGRGYTVGSAGNISARLDDGWLITPTDACLGRMDPADIAKVNLAGEWVSGSKPSKTLALHRE
VYDRNPQVGGVVHTHSTHLVALTLAGVWQEDDILPPLTPYQVMKVGHIPLIPYERPGSPKVAERVAELANSVRGVMLERL
GPVVWESSVAKACYALEELEETARLWLMSNPKPAPLAPAALEELRQVFDARW
>Mature_212_residues
MIDENALRQEICDVGRLLYGRGYTVGSAGNISARLDDGWLITPTDACLGRMDPADIAKVNLAGEWVSGSKPSKTLALHRE
VYDRNPQVGGVVHTHSTHLVALTLAGVWQEDDILPPLTPYQVMKVGHIPLIPYERPGSPKVAERVAELANSVRGVMLERL
GPVVWESSVAKACYALEELEETARLWLMSNPKPAPLAPAALEELRQVFDARW

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=204, Percent_Identity=42.6470588235294, Blast_Score=167, Evalue=3e-43,
Organism=Escherichia coli, GI1789164, Length=210, Percent_Identity=27.1428571428571, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1790642, Length=203, Percent_Identity=29.064039408867, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 23269; Mature: 23269

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDENALRQEICDVGRLLYGRGYTVGSAGNISARLDDGWLITPTDACLGRMDPADIAKVN
CCCHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCEEECCHHHHHCCCCCHHHEEEE
LAGEWVSGSKPSKTLALHREVYDRNPQVGGVVHTHSTHLVALTLAGVWQEDDILPPLTPY
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEHHCCCCCCCCCCCCHH
QVMKVGHIPLIPYERPGSPKVAERVAELANSVRGVMLERLGPVVWESSVAKACYALEELE
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
ETARLWLMSNPKPAPLAPAALEELRQVFDARW
HHHHEEEECCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIDENALRQEICDVGRLLYGRGYTVGSAGNISARLDDGWLITPTDACLGRMDPADIAKVN
CCCHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCEEECCHHHHHCCCCCHHHEEEE
LAGEWVSGSKPSKTLALHREVYDRNPQVGGVVHTHSTHLVALTLAGVWQEDDILPPLTPY
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEHHCCCCCCCCCCCCHH
QVMKVGHIPLIPYERPGSPKVAERVAELANSVRGVMLERLGPVVWESSVAKACYALEELE
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
ETARLWLMSNPKPAPLAPAALEELRQVFDARW
HHHHEEEECCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]