| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is tatB
Identifier: 66043650
GI number: 66043650
Start: 413752
End: 414228
Strand: Reverse
Name: tatB
Synonym: Psyr_0383
Alternate gene names: 66043650
Gene position: 414228-413752 (Counterclockwise)
Preceding gene: 66043651
Following gene: 66043649
Centisome position: 6.8
GC content: 62.47
Gene sequence:
>477_bases ATGTTCGGTATCAGCTTCTCTGAACTGCTGCTTGTCGGCCTGGTTGCCTTGCTGGTACTGGGTCCCGAGCGCCTGCCGGG TGCTGCACGCACCGCAGGCTTATGGATCGGCCGCTTGAAGCGCAGCTTCAATGCGATCAAACAGGAAGTTGAACGTGAAA TCGGGGCCGACGAAATTCGTCGGCAGTTGCACAACGAGCATATTCTTTCGATGGAAGACGAAGCGCGCAAAATGTTCGCG CCCAATCAGCCGTCCGAGAACAGCCCGGAGCCGGCAAACCCGCCGCCAGCGCCCGCTGCGGCCGAAGCTGCAAGCCCCGT GCACAACCAAGCCGCACACCACGAAATCGGCCCTGCCCAACCTGCGGCACCAAAGACCGAGCTGTCGCTGGAGAAAACCG CGAAACCGGCTGACGCCGGCACACCGGTCCCGGCGCCTCCCGCCCACGATTCGTCATTGCCACCGCGAGCACCATGA
Upstream 100 bases:
>100_bases CAGCCAGCCCCACAGGGCTCGCCGCTGAATCAGCCGCACACCATCGACGCGCAGGCGCACAAAGTCGACGAGCCGATCCG CAAAGACCAGGTTTAAGCCC
Downstream 100 bases:
>100_bases GCGCTGATACCCCGGAAAATGATCAGCAAATGCCGCTGATCTCGCACCTCACCGAGCTGCGTACACGTCTGTTGCGCTGC GTTGCGGCAGTCTTCCTGAT
Product: sec-independent translocase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MFGISFSELLLVGLVALLVLGPERLPGAARTAGLWIGRLKRSFNAIKQEVEREIGADEIRRQLHNEHILSMEDEARKMFA PNQPSENSPEPANPPPAPAAAEAASPVHNQAAHHEIGPAQPAAPKTELSLEKTAKPADAGTPVPAPPAHDSSLPPRAP
Sequences:
>Translated_158_residues MFGISFSELLLVGLVALLVLGPERLPGAARTAGLWIGRLKRSFNAIKQEVEREIGADEIRRQLHNEHILSMEDEARKMFA PNQPSENSPEPANPPPAPAAAEAASPVHNQAAHHEIGPAQPAAPKTELSLEKTAKPADAGTPVPAPPAHDSSLPPRAP >Mature_158_residues MFGISFSELLLVGLVALLVLGPERLPGAARTAGLWIGRLKRSFNAIKQEVEREIGADEIRRQLHNEHILSMEDEARKMFA PNQPSENSPEPANPPPAPAAAEAASPVHNQAAHHEIGPAQPAAPKTELSLEKTAKPADAGTPVPAPPAHDSSLPPRAP
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family
Homologues:
Organism=Escherichia coli, GI48994984, Length=173, Percent_Identity=32.3699421965318, Blast_Score=64, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATB_PSEU2 (Q4ZZG9)
Other databases:
- EMBL: CP000075 - RefSeq: YP_233491.1 - STRING: Q4ZZG9 - GeneID: 3365859 - GenomeReviews: CP000075_GR - KEGG: psb:Psyr_0383 - NMPDR: fig|205918.4.peg.716 - eggNOG: COG1826 - HOGENOM: HBG751935 - OMA: KTAKPAD - ProtClustDB: PRK00404 - BioCyc: PSYR205918:PSYR_0383-MONOMER - HAMAP: MF_00237 - InterPro: IPR003369 - InterPro: IPR018448 - InterPro: IPR003998 - PRINTS: PR01506 - TIGRFAMs: TIGR01410
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 16764; Mature: 16764
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x16a7e8b0)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGISFSELLLVGLVALLVLGPERLPGAARTAGLWIGRLKRSFNAIKQEVEREIGADEIR CCCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RQLHNEHILSMEDEARKMFAPNQPSENSPEPANPPPAPAAAEAASPVHNQAAHHEIGPAQ HHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHCCCCCCC PAAPKTELSLEKTAKPADAGTPVPAPPAHDSSLPPRAP CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH >Mature Secondary Structure MFGISFSELLLVGLVALLVLGPERLPGAARTAGLWIGRLKRSFNAIKQEVEREIGADEIR CCCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RQLHNEHILSMEDEARKMFAPNQPSENSPEPANPPPAPAAAEAASPVHNQAAHHEIGPAQ HHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHCCCCCCC PAAPKTELSLEKTAKPADAGTPVPAPPAHDSSLPPRAP CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA