| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is opgH [H]
Identifier: 66043645
GI number: 66043645
Start: 403976
End: 406558
Strand: Direct
Name: opgH [H]
Synonym: Psyr_0378
Alternate gene names: 66043645
Gene position: 403976-406558 (Clockwise)
Preceding gene: 66043644
Following gene: 66043657
Centisome position: 6.63
GC content: 61.94
Gene sequence:
>2583_bases ATGAGTAATTCTCTACCGGTGCCAATGTCTCTGAACGAGTACCTGGCGCATTTACCGATGAGCGACGAGCAGCGGGCAGA ACTTGCCGGCTGCACGACCTTCGCCGAGTTGCATGAGCGACTTTCCGCGCAGCCGGTCACTGACCCTGCCGAGGCCGCTC AGGCTTCGGTGGGTCGCCGTCTGACGCTGACTACCGCAGATCAGCTGGAGGACGCCGAGATGCTCGGCGTCGATGCCAGC GGTCGCCTGTGCCTGAAGGCCACACCACCGATTCGCCGGACCAAGGTCGTGCCAGAGCCATGGCGCACCAACATCCTGGT GCGCGGCTGGCGTCGCCTGACCGGCAAGGGCAACCCGCCCAAGCCCGAGCACGATGATCTGCCGCGGGATCTGCCGAAGG CGCGCTGGCGTACCGTCGGTTCGATCCGTCGCTACATCCTGCTGATCCTCATGCTGGGTCAGACGATCGTGGCTGGCTGG TACATGAAAGGCATTCTGCCGTATCAGGGCTGGTCGCTGGTTTCGCTCGACGAAATCACCCGTCAGACCTTCGTGCAGAC CGCCTTGCAGGTCATGCCTTATGCCTTGCAGACCAGTATCCTGTTGTTGTTCGGGATTCTGTTCTGCTGGGTATCGGCCG GTTTCTGGACCGCGCTGATGGGCTTCCTGGAACTGCTCACCGGTCGCGACAAATACCGCATCTCGGGTGCCAGTGCCGGC AACGAGCCGATCGAAAAGGGCGCACGTACTGCGCTGGTCATGCCGATCTGCAACGAAGACGTGCCTCGGGTTTTCGCCGG TCTGCGCGCTACGTTCGAATCGGTAGCGGCCACGGGTGACCTGGATCGTTTCGATTTCTTCGTGCTCAGTGACACCAACG AAACCGACATCGCCGTTGCCGAGCAACAGGCGTGGCTGGACGTGTGCCGCGAGACCAAAGGCTTCGGCAAGATCTTCTAC CGTCGTCGTCGCCGTCGCGTAAAACGCAAAAGCGGCAACCTCGACGACTTCTGCCGGCGCTGGGGCGGTGACTACCGCTA CATGGTCGTGCTGGACGCCGACAGCGTCATGAGCGGTGAGTGTCTGACCAGTCTGGTTCGCCTGATGGAAGCCACGCCGG ACGCCGGTATCATCCAGACCGCGCCACGTGCGTCGGGCATGGACACGCTGTATGCACGCATGCAGCAGTTCGCTACCCGG GTCTATGGTCCGCTGTTCACTGCCGGTCTGCACTTCTGGCAGCTGGGTGAATCCCACTATTGGGGTCACAACGCGATCAT CCGCATGAAGCCCTTCATCGAGCACTGCGCCCTGGCGCCGCTGCCCGGCAAAGGCGCATTCGCCGGTGCGATCCTCTCCC ACGACTTCGTCGAAGCTGCGCTGATGCGCCGTGCCGGCTGGGGCGTGTGGATTGCCTACGACCTGCCAGGCAGTTACGAA GAGTTGCCGCCTAACCTGCTGGACGAACTCAAGCGTGACCGTCGCTGGTGCCACGGCAACCTGATGAACTTCAGGCTGTT CCTGGTCAAGGGCATGCACCCGGTTCACCGTGCGGTGTTCCTGACCGGTGTGATGTCTTACCTGTCGGCACCGTTGTGGT TCTTCTTCCTCGTGCTGTCCACGGCTTTGCTGGCGGTGAACACGCTGATGGAGCCGACCTACTTCCTTGAACCGCGTCAG CTGTACCCGCTGTGGCCACAATGGCACCCAGAAAAAGCCGTTGCGTTGTTCTCGACCACCATCGTCCTGCTGTTCCTGCC TAAACTGCTCAGCGTCATTCTGATCTGGGCCAAGGGCGCGAAAGGCTTCGGTGGCAAGTTCAAGGTCACCGTTTCGATGC TGCTGGAAATGCTCTTCTCGGTGCTGCTGGCTCCGGTGCGCATGCTGTTCCACACACGCTTCGTACTGGCCGCGTTCCTG GGCTGGGCCGCGACCTGGAACTCGCCGCAACGCGACGATGACTCCACGCCGTGGATCGAAGCGGTGAAGCGTCATGGTCC GCAAACCCTGCTGGGCGCGTGCTGGGCCTTGCTGGTGTTCTGGTTGAACCCGAGCTTCCTGTGGTGGCTTGCGCCGATCG TGGTGTCGTTGATGCTGTCGATTCCGGTGTCGGTGATTTCCAGCCGTACCAATCTGGGCGTCAAGGCGCGTGACGAGAAG TTCTTCCTGATTCCTGAAGAGTTCGAGCCGCCGCAAGAGCTGATCTCGACGGATCGGTACACCTACGAGAACCGCTGGCA TGCGCTGAAGCAGGGCTTCATCCGCGCTGTGGTCGACCCGCGCCAGAACGCCCTGGCCTGCGCCCTGGCGACGTCGCGTC ACCGTCAGGCTCAGCCGATTGAAGTGGTGCGTATGGAGCGTGTCGATCAGGCACTCAAGGTCGGTCCGGCAAAACTCGGC AATCAGGAACGCCTGATGCTGCTGAGCGACCCGGTCGCCCTTGGCCGCTTGCACGAGCGCGTCTGGAGCGAAGGTCACGA AGAGTGGCTGGCCGCGTGGAGAGCTTCCATCGAAGCCGATCCACATGCGCCTCTGCTGCCTTTGCAGCCTGAAGGTAAAG CATCGGAGCCGGTTCCGGTCTAA
Upstream 100 bases:
>100_bases GAAATTCAGCAGCCTGAAACCGAGGCAGCACCCACCCATCCGGAACCGGCCAAGACGTTGCAAGTCATGACCGAGACCTG GAGCTATCAGTTGCCGAGCG
Downstream 100 bases:
>100_bases AACCGCCCGGCTACGAAAAGAGCCCCTGACGCTTAGCGCGTCGGTGGCTTTTTTATTGGGCTTTGTGGCAAAGACCCACG CAAGCGAGGGGGAGAGGCGA
Product: glucosyltransferase MdoH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 860; Mature: 859
Protein sequence:
>860_residues MSNSLPVPMSLNEYLAHLPMSDEQRAELAGCTTFAELHERLSAQPVTDPAEAAQASVGRRLTLTTADQLEDAEMLGVDAS GRLCLKATPPIRRTKVVPEPWRTNILVRGWRRLTGKGNPPKPEHDDLPRDLPKARWRTVGSIRRYILLILMLGQTIVAGW YMKGILPYQGWSLVSLDEITRQTFVQTALQVMPYALQTSILLLFGILFCWVSAGFWTALMGFLELLTGRDKYRISGASAG NEPIEKGARTALVMPICNEDVPRVFAGLRATFESVAATGDLDRFDFFVLSDTNETDIAVAEQQAWLDVCRETKGFGKIFY RRRRRRVKRKSGNLDDFCRRWGGDYRYMVVLDADSVMSGECLTSLVRLMEATPDAGIIQTAPRASGMDTLYARMQQFATR VYGPLFTAGLHFWQLGESHYWGHNAIIRMKPFIEHCALAPLPGKGAFAGAILSHDFVEAALMRRAGWGVWIAYDLPGSYE ELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFFFLVLSTALLAVNTLMEPTYFLEPRQ LYPLWPQWHPEKAVALFSTTIVLLFLPKLLSVILIWAKGAKGFGGKFKVTVSMLLEMLFSVLLAPVRMLFHTRFVLAAFL GWAATWNSPQRDDDSTPWIEAVKRHGPQTLLGACWALLVFWLNPSFLWWLAPIVVSLMLSIPVSVISSRTNLGVKARDEK FFLIPEEFEPPQELISTDRYTYENRWHALKQGFIRAVVDPRQNALACALATSRHRQAQPIEVVRMERVDQALKVGPAKLG NQERLMLLSDPVALGRLHERVWSEGHEEWLAAWRASIEADPHAPLLPLQPEGKASEPVPV
Sequences:
>Translated_860_residues MSNSLPVPMSLNEYLAHLPMSDEQRAELAGCTTFAELHERLSAQPVTDPAEAAQASVGRRLTLTTADQLEDAEMLGVDAS GRLCLKATPPIRRTKVVPEPWRTNILVRGWRRLTGKGNPPKPEHDDLPRDLPKARWRTVGSIRRYILLILMLGQTIVAGW YMKGILPYQGWSLVSLDEITRQTFVQTALQVMPYALQTSILLLFGILFCWVSAGFWTALMGFLELLTGRDKYRISGASAG NEPIEKGARTALVMPICNEDVPRVFAGLRATFESVAATGDLDRFDFFVLSDTNETDIAVAEQQAWLDVCRETKGFGKIFY RRRRRRVKRKSGNLDDFCRRWGGDYRYMVVLDADSVMSGECLTSLVRLMEATPDAGIIQTAPRASGMDTLYARMQQFATR VYGPLFTAGLHFWQLGESHYWGHNAIIRMKPFIEHCALAPLPGKGAFAGAILSHDFVEAALMRRAGWGVWIAYDLPGSYE ELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFFFLVLSTALLAVNTLMEPTYFLEPRQ LYPLWPQWHPEKAVALFSTTIVLLFLPKLLSVILIWAKGAKGFGGKFKVTVSMLLEMLFSVLLAPVRMLFHTRFVLAAFL GWAATWNSPQRDDDSTPWIEAVKRHGPQTLLGACWALLVFWLNPSFLWWLAPIVVSLMLSIPVSVISSRTNLGVKARDEK FFLIPEEFEPPQELISTDRYTYENRWHALKQGFIRAVVDPRQNALACALATSRHRQAQPIEVVRMERVDQALKVGPAKLG NQERLMLLSDPVALGRLHERVWSEGHEEWLAAWRASIEADPHAPLLPLQPEGKASEPVPV >Mature_859_residues SNSLPVPMSLNEYLAHLPMSDEQRAELAGCTTFAELHERLSAQPVTDPAEAAQASVGRRLTLTTADQLEDAEMLGVDASG RLCLKATPPIRRTKVVPEPWRTNILVRGWRRLTGKGNPPKPEHDDLPRDLPKARWRTVGSIRRYILLILMLGQTIVAGWY MKGILPYQGWSLVSLDEITRQTFVQTALQVMPYALQTSILLLFGILFCWVSAGFWTALMGFLELLTGRDKYRISGASAGN EPIEKGARTALVMPICNEDVPRVFAGLRATFESVAATGDLDRFDFFVLSDTNETDIAVAEQQAWLDVCRETKGFGKIFYR RRRRRVKRKSGNLDDFCRRWGGDYRYMVVLDADSVMSGECLTSLVRLMEATPDAGIIQTAPRASGMDTLYARMQQFATRV YGPLFTAGLHFWQLGESHYWGHNAIIRMKPFIEHCALAPLPGKGAFAGAILSHDFVEAALMRRAGWGVWIAYDLPGSYEE LPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFFFLVLSTALLAVNTLMEPTYFLEPRQL YPLWPQWHPEKAVALFSTTIVLLFLPKLLSVILIWAKGAKGFGGKFKVTVSMLLEMLFSVLLAPVRMLFHTRFVLAAFLG WAATWNSPQRDDDSTPWIEAVKRHGPQTLLGACWALLVFWLNPSFLWWLAPIVVSLMLSIPVSVISSRTNLGVKARDEKF FLIPEEFEPPQELISTDRYTYENRWHALKQGFIRAVVDPRQNALACALATSRHRQAQPIEVVRMERVDQALKVGPAKLGN QERLMLLSDPVALGRLHERVWSEGHEEWLAAWRASIEADPHAPLLPLQPEGKASEPVPV
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG2943
COG function: function code M; Membrane glycosyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787287, Length=852, Percent_Identity=63.0281690140845, Blast_Score=1053, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 97086; Mature: 96955
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSLPVPMSLNEYLAHLPMSDEQRAELAGCTTFAELHERLSAQPVTDPAEAAQASVGRR CCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE LTLTTADQLEDAEMLGVDASGRLCLKATPPIRRTKVVPEPWRTNILVRGWRRLTGKGNPP EEEEEHHHCCCHHHCCCCCCCCEEEECCCCCHHCCCCCCCHHCCHHHHHHHHHCCCCCCC KPEHDDLPRDLPKARWRTVGSIRRYILLILMLGQTIVAGWYMKGILPYQGWSLVSLDEIT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHH RQTFVQTALQVMPYALQTSILLLFGILFCWVSAGFWTALMGFLELLTGRDKYRISGASAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC NEPIEKGARTALVMPICNEDVPRVFAGLRATFESVAATGDLDRFDFFVLSDTNETDIAVA CCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEHH EQQAWLDVCRETKGFGKIFYRRRRRRVKRKSGNLDDFCRRWGGDYRYMVVLDADSVMSGE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCCCH CLTSLVRLMEATPDAGIIQTAPRASGMDTLYARMQQFATRVYGPLFTAGLHFWQLGESHY HHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WGHNAIIRMKPFIEHCALAPLPGKGAFAGAILSHDFVEAALMRRAGWGVWIAYDLPGSYE CCCCEEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH ELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFFFLVLS HCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TALLAVNTLMEPTYFLEPRQLYPLWPQWHPEKAVALFSTTIVLLFLPKLLSVILIWAKGA HHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KGFGGKFKVTVSMLLEMLFSVLLAPVRMLFHTRFVLAAFLGWAATWNSPQRDDDSTPWIE CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH AVKRHGPQTLLGACWALLVFWLNPSFLWWLAPIVVSLMLSIPVSVISSRTNLGVKARDEK HHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCE FFLIPEEFEPPQELISTDRYTYENRWHALKQGFIRAVVDPRQNALACALATSRHRQAQPI EEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH EVVRMERVDQALKVGPAKLGNQERLMLLSDPVALGRLHERVWSEGHEEWLAAWRASIEAD HHHHHHHHHHHHHCCCHHCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHCCCC PHAPLLPLQPEGKASEPVPV CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SNSLPVPMSLNEYLAHLPMSDEQRAELAGCTTFAELHERLSAQPVTDPAEAAQASVGRR CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE LTLTTADQLEDAEMLGVDASGRLCLKATPPIRRTKVVPEPWRTNILVRGWRRLTGKGNPP EEEEEHHHCCCHHHCCCCCCCCEEEECCCCCHHCCCCCCCHHCCHHHHHHHHHCCCCCCC KPEHDDLPRDLPKARWRTVGSIRRYILLILMLGQTIVAGWYMKGILPYQGWSLVSLDEIT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHH RQTFVQTALQVMPYALQTSILLLFGILFCWVSAGFWTALMGFLELLTGRDKYRISGASAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC NEPIEKGARTALVMPICNEDVPRVFAGLRATFESVAATGDLDRFDFFVLSDTNETDIAVA CCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEHH EQQAWLDVCRETKGFGKIFYRRRRRRVKRKSGNLDDFCRRWGGDYRYMVVLDADSVMSGE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCCCH CLTSLVRLMEATPDAGIIQTAPRASGMDTLYARMQQFATRVYGPLFTAGLHFWQLGESHY HHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WGHNAIIRMKPFIEHCALAPLPGKGAFAGAILSHDFVEAALMRRAGWGVWIAYDLPGSYE CCCCEEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH ELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFFFLVLS HCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TALLAVNTLMEPTYFLEPRQLYPLWPQWHPEKAVALFSTTIVLLFLPKLLSVILIWAKGA HHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KGFGGKFKVTVSMLLEMLFSVLLAPVRMLFHTRFVLAAFLGWAATWNSPQRDDDSTPWIE CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH AVKRHGPQTLLGACWALLVFWLNPSFLWWLAPIVVSLMLSIPVSVISSRTNLGVKARDEK HHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCE FFLIPEEFEPPQELISTDRYTYENRWHALKQGFIRAVVDPRQNALACALATSRHRQAQPI EEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH EVVRMERVDQALKVGPAKLGNQERLMLLSDPVALGRLHERVWSEGHEEWLAAWRASIEAD HHHHHHHHHHHHHCCCHHCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHCCCC PHAPLLPLQPEGKASEPVPV CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA