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The map label for this gene is blc [H]

Identifier: 66043637

GI number: 66043637

Start: 392869

End: 393447

Strand: Reverse

Name: blc [H]

Synonym: Psyr_0368

Alternate gene names: 66043637

Gene position: 393447-392869 (Counterclockwise)

Preceding gene: 66043638

Following gene: 66043635

Centisome position: 6.46

GC content: 59.59

Gene sequence:

>579_bases
ATGATCAAGGTACTGGTACGTTTTGGAATTTGTGTCATGGCCAGCTTCCTGGCCATCGGTTTTGCCCACTCGGCTGACAA
CCTCGAGCCAAAGACTGTCGACAGCGTCGACCTCAAGCAGTACCAGGGCACCTGGTACGAGATCGCGCGTCTGCCGATGT
TCTTCCAGCGCAAGTGCGCTCAGTCCGAGGCGCGTTATACGCTCAAGGATGACGGCAACATCGCGGTGACCAACCGCTGC
CGCACGATTGAAGGCAAGTGGGAAGAAGCAACGGGCACCGCCTCGCCGCAGGTTCCGGGCAAGACCGACAAGCTGTGGGT
TGTGTTCGACAACTGGTTCTCGCGCCTGCTGCCGAGCGTTGCCAAGGGTGATTACTGGATTCTGGACGTCAGCGAAGGCT
ACCGCACCGCCGTGGTCGGCAACCCGGATCGCAAATACCTGTGGCTGTTGTCGCGTACACCGACCGTGTCTGCCTCGGTC
AGGGAAGACATGCTCAGCAAGGCCCGCCAGCAAGGCTACGACACCTCACGCCTGATCTGGCGCGAGGATGACTCGAAGAT
TGGCAAGGGCGAGAAGTAA

Upstream 100 bases:

>100_bases
CATGTCGAGCTGCACCTGGGGCGACCAGAACACCTTTATCAGCGTGCAGTACGCAGCGGACAAGGTTGTGCTGTTCTCGG
GCCAGGGTCTGAAATAACAC

Downstream 100 bases:

>100_bases
CCGAATCGGGATTCTGGCTAAGCCCGGTAGGAGCGAACTTGTTCGCGAAGACGGTCGTTCGAACGATAAATTTCAGAACG
CTTTCCGCCCCCTTCGCAAA

Product: lipoprotein Blc

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MIKVLVRFGICVMASFLAIGFAHSADNLEPKTVDSVDLKQYQGTWYEIARLPMFFQRKCAQSEARYTLKDDGNIAVTNRC
RTIEGKWEEATGTASPQVPGKTDKLWVVFDNWFSRLLPSVAKGDYWILDVSEGYRTAVVGNPDRKYLWLLSRTPTVSASV
REDMLSKARQQGYDTSRLIWREDDSKIGKGEK

Sequences:

>Translated_192_residues
MIKVLVRFGICVMASFLAIGFAHSADNLEPKTVDSVDLKQYQGTWYEIARLPMFFQRKCAQSEARYTLKDDGNIAVTNRC
RTIEGKWEEATGTASPQVPGKTDKLWVVFDNWFSRLLPSVAKGDYWILDVSEGYRTAVVGNPDRKYLWLLSRTPTVSASV
REDMLSKARQQGYDTSRLIWREDDSKIGKGEK
>Mature_192_residues
MIKVLVRFGICVMASFLAIGFAHSADNLEPKTVDSVDLKQYQGTWYEIARLPMFFQRKCAQSEARYTLKDDGNIAVTNRC
RTIEGKWEEATGTASPQVPGKTDKLWVVFDNWFSRLLPSVAKGDYWILDVSEGYRTAVVGNPDRKYLWLLSRTPTVSASV
REDMLSKARQQGYDTSRLIWREDDSKIGKGEK

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=168, Percent_Identity=36.3095238095238, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 21868; Mature: 21868

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVLVRFGICVMASFLAIGFAHSADNLEPKTVDSVDLKQYQGTWYEIARLPMFFQRKCA
CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCHHHHHHHH
QSEARYTLKDDGNIAVTNRCRTIEGKWEEATGTASPQVPGKTDKLWVVFDNWFSRLLPSV
HHHCCEEECCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
AKGDYWILDVSEGYRTAVVGNPDRKYLWLLSRTPTVSASVREDMLSKARQQGYDTSRLIW
HCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEE
REDDSKIGKGEK
ECCCCCCCCCCC
>Mature Secondary Structure
MIKVLVRFGICVMASFLAIGFAHSADNLEPKTVDSVDLKQYQGTWYEIARLPMFFQRKCA
CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCHHHHHHHH
QSEARYTLKDDGNIAVTNRCRTIEGKWEEATGTASPQVPGKTDKLWVVFDNWFSRLLPSV
HHHCCEEECCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
AKGDYWILDVSEGYRTAVVGNPDRKYLWLLSRTPTVSASVREDMLSKARQQGYDTSRLIW
HCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEE
REDDSKIGKGEK
ECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]