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The map label for this gene is dcyD [H]

Identifier: 66043628

GI number: 66043628

Start: 384416

End: 385414

Strand: Reverse

Name: dcyD [H]

Synonym: Psyr_0359

Alternate gene names: 66043628

Gene position: 385414-384416 (Counterclockwise)

Preceding gene: 66043630

Following gene: 66043627

Centisome position: 6.32

GC content: 62.36

Gene sequence:

>999_bases
ATGATCAAACATCAGCTTGCCCGCTTCAATCGCCTGGACCTGATCAGCGCGCCAACGGCTCTGGAAAAGCTCGAGCGCCT
GTCGATCTGGGCAGATCGTGATATCTACATCAAGCGGGATGACACCACAACGCTGGCCCTGGGCGGCAACAAAGTGCGCA
AACTCGAGTACCTGGCCGCCGATGCGCTGGCCCAGGGTGCCGATACACTGATCACCGCCGGTGCCATCCAGTCCAACCAT
GTCCGTCAGACCGCTGCCCTGGCCGCGCGTCTGGGCCTTGGCTGTGTGGCGCTGCTGGAAAATCCCATCGGCACCGAAGA
CCCCAGCTACCTGAAAAACGGCAATCGCCTGCTGCTCGAACTGTTCGATGCCAAGGTAGAGCTGGTGGAAAACCTCGACA
ACGCTGACGAACAACTGCATGCCCTGGCTGCACGCCTGCGCTCCAGTGGCAAAAAGCCTTATCTGGTCCCCATCGGAGGC
TCAAGCCCGGTGGGTGCGCTGGGTTATGTGCGCGCCGGGCTGGAACTGGCCGAGCAGATCAAGCAGACCGGCATCGAGTT
TGCGGCTGTCGTTCTGGCCTCCGGCAGTGCCGGCACGCACAGCGGCCTGGCGTTGGCACTGGCTCACGAGCTGCCGCAAT
TGCCGGTCATCGGTGTGACCGTGTCGCGCAGTGAAGAAGCACAGCTGCCCAAGGTCCAGGGCCTGGCCGAGCGCACCGCA
GAGTTGCTCGGCGTTGCGCTGCCTGAACACTTCAAGGTCGAACTGTGGGATGAGTATTTCGCCCCGCGATATGGTGAACC
GAACGCCGGTACGCTGTCAGCCATCAAGCTGGTGGCCAGCCACGAAGGACTGTTGCTTGACCCGGTCTACACCGGCAAGG
CCATGTCCGGTCTGCTCGATGGCATCGGCCGTCAACGCTTCAACGACGGCCCGCTGATCTTCCTGCACACCGGCGGTGCG
CCAGCGCTGTTTGCCTATCCGGATGCGTTCGACCAGTGA

Upstream 100 bases:

>100_bases
CTGTCGGAATACGCGAAGAGCGCCGTGCGCACAGATAAGTTGCCGTGCGAGAAACGTCTGCCTATAGTCCGGTGACTCTT
TACACGGCTTATCGACCACC

Downstream 100 bases:

>100_bases
CGTTCTAGCCAACGGGTCCTTTATGCTTTTGTGGAGGGGAAATAACTTTTTTTGTTATTTTTCCTCATAAGCAGATGGCT
ATATAGTCGCGCCCGGCAGA

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MIKHQLARFNRLDLISAPTALEKLERLSIWADRDIYIKRDDTTTLALGGNKVRKLEYLAADALAQGADTLITAGAIQSNH
VRQTAALAARLGLGCVALLENPIGTEDPSYLKNGNRLLLELFDAKVELVENLDNADEQLHALAARLRSSGKKPYLVPIGG
SSPVGALGYVRAGLELAEQIKQTGIEFAAVVLASGSAGTHSGLALALAHELPQLPVIGVTVSRSEEAQLPKVQGLAERTA
ELLGVALPEHFKVELWDEYFAPRYGEPNAGTLSAIKLVASHEGLLLDPVYTGKAMSGLLDGIGRQRFNDGPLIFLHTGGA
PALFAYPDAFDQ

Sequences:

>Translated_332_residues
MIKHQLARFNRLDLISAPTALEKLERLSIWADRDIYIKRDDTTTLALGGNKVRKLEYLAADALAQGADTLITAGAIQSNH
VRQTAALAARLGLGCVALLENPIGTEDPSYLKNGNRLLLELFDAKVELVENLDNADEQLHALAARLRSSGKKPYLVPIGG
SSPVGALGYVRAGLELAEQIKQTGIEFAAVVLASGSAGTHSGLALALAHELPQLPVIGVTVSRSEEAQLPKVQGLAERTA
ELLGVALPEHFKVELWDEYFAPRYGEPNAGTLSAIKLVASHEGLLLDPVYTGKAMSGLLDGIGRQRFNDGPLIFLHTGGA
PALFAYPDAFDQ
>Mature_332_residues
MIKHQLARFNRLDLISAPTALEKLERLSIWADRDIYIKRDDTTTLALGGNKVRKLEYLAADALAQGADTLITAGAIQSNH
VRQTAALAARLGLGCVALLENPIGTEDPSYLKNGNRLLLELFDAKVELVENLDNADEQLHALAARLRSSGKKPYLVPIGG
SSPVGALGYVRAGLELAEQIKQTGIEFAAVVLASGSAGTHSGLALALAHELPQLPVIGVTVSRSEEAQLPKVQGLAERTA
ELLGVALPEHFKVELWDEYFAPRYGEPNAGTLSAIKLVASHEGLLLDPVYTGKAMSGLLDGIGRQRFNDGPLIFLHTGGA
PALFAYPDAFDQ

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=327, Percent_Identity=59.3272171253823, Blast_Score=383, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 35482; Mature: 35482

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKHQLARFNRLDLISAPTALEKLERLSIWADRDIYIKRDDTTTLALGGNKVRKLEYLAA
CCCHHHHHCCCCCEECCCHHHHHHHHHHEEECCCEEEEECCCEEEEECCCCHHHHHHHHH
DALAQGADTLITAGAIQSNHVRQTAALAARLGLGCVALLENPIGTEDPSYLKNGNRLLLE
HHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEH
LFDAKVELVENLDNADEQLHALAARLRSSGKKPYLVPIGGSSPVGALGYVRAGLELAEQI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
KQTGIEFAAVVLASGSAGTHSGLALALAHELPQLPVIGVTVSRSEEAQLPKVQGLAERTA
HHCCHHEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
ELLGVALPEHFKVELWDEYFAPRYGEPNAGTLSAIKLVASHEGLLLDPVYTGKAMSGLLD
HHHHHCCCCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
GIGRQRFNDGPLIFLHTGGAPALFAYPDAFDQ
HHHHCCCCCCCEEEEECCCCCEEEECCCCCCC
>Mature Secondary Structure
MIKHQLARFNRLDLISAPTALEKLERLSIWADRDIYIKRDDTTTLALGGNKVRKLEYLAA
CCCHHHHHCCCCCEECCCHHHHHHHHHHEEECCCEEEEECCCEEEEECCCCHHHHHHHHH
DALAQGADTLITAGAIQSNHVRQTAALAARLGLGCVALLENPIGTEDPSYLKNGNRLLLE
HHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEH
LFDAKVELVENLDNADEQLHALAARLRSSGKKPYLVPIGGSSPVGALGYVRAGLELAEQI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
KQTGIEFAAVVLASGSAGTHSGLALALAHELPQLPVIGVTVSRSEEAQLPKVQGLAERTA
HHCCHHEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
ELLGVALPEHFKVELWDEYFAPRYGEPNAGTLSAIKLVASHEGLLLDPVYTGKAMSGLLD
HHHHHCCCCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
GIGRQRFNDGPLIFLHTGGAPALFAYPDAFDQ
HHHHCCCCCCCEEEEECCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA