| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is tauD [H]
Identifier: 66043606
GI number: 66043606
Start: 359311
End: 360207
Strand: Direct
Name: tauD [H]
Synonym: Psyr_0337
Alternate gene names: 66043606
Gene position: 359311-360207 (Clockwise)
Preceding gene: 66043604
Following gene: 66043607
Centisome position: 5.9
GC content: 59.53
Gene sequence:
>897_bases ATGCCAGCAGCCTCCCTCGCTTCATCGTCCGCTCAACCTGCTTCGCAAGCGTTCGAAGTGCGTCCATTCACCGAAAAGGT GGGCGCGGAAATCGTTGGGCTGGATCTGTCCAGGCCGTTGAACGATGCCGACTTCGCTCGTGTGCATCAGGCACATCTGG ATCACCATGTGGTGGTGTTTCGCGATCAGCAGATCACGCCGCAACAGCAGATCGATTTCAGCCGGCGCTTCGGGGTGCTG CAGATCCATGTGCTCAAGCAGTTTCTGTTGGCCAACCATCCGGAAATTCTGATCGTCTCCAACATTGTCGAGAACGATAA GCCCGTGGGCCTGGGCGATGCCGGTAAATACTGGCATTCGGACCTGTCATACAAAGAGTTGCCGAGCCTGGGCTCGATGC TTTACGCCCAGGAGTTGCCGAGTGAAGGCGGCGATACGCTGTTTGCAGACATGCATCTGGCGTGGGAAACGTTGCCGCAA CACCTGCGCGATGCCGTCGAGGGGCGCTCAGCGGTGCACAGTTACACCGCACGCTACGCCGAGGGCCATAACGCCGCCAA CTGGCGTCCGACCCTGACCGCCGAGCAACTGGCGCAGGTAGTTGAAGTCAGCCACCCGATCGTTCGTACCCACCCTGAAA ACGGGCGCAAGGCACTGTTTGTCAGCGAGGGTTTCACGACGCGCATCCTTGGTCTGCCGGAAGACGAGAGCCGTCAGATT CTCAACGAGATTTATGCTCACAGCGTGAAGCCCGAGCACATTTATCGGCACCAGTGGCGGGCCAACGACATGGTGTTCTG GGACAACCGTTCCCTGACCCACCTGGCTGCCGGCTGCCCGGCGCATCTGCGCCGCAAACTGCATCGCACGACCATTCAAG GCACCGCGCCATTTTGA
Upstream 100 bases:
>100_bases ACTTCAGCACTATCGATATTCCTTAACGGTATTTAAATTCTCTTTCTTATATCTATAGAGTTTCTTCTTTCAGCCACACA GTCCTGGAGTCGGAGTTCTC
Downstream 100 bases:
>100_bases TCCAGGAGGGCCGTTCATGAATGCTGTCGCGCAAGGCCACACGGCCAGCACCCAAGCGCAGTCGGCTGCACAGCCCACTG CTGAAGCCTTGTTGCAAGTC
Product: taurine dioxygenase
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MPAASLASSSAQPASQAFEVRPFTEKVGAEIVGLDLSRPLNDADFARVHQAHLDHHVVVFRDQQITPQQQIDFSRRFGVL QIHVLKQFLLANHPEILIVSNIVENDKPVGLGDAGKYWHSDLSYKELPSLGSMLYAQELPSEGGDTLFADMHLAWETLPQ HLRDAVEGRSAVHSYTARYAEGHNAANWRPTLTAEQLAQVVEVSHPIVRTHPENGRKALFVSEGFTTRILGLPEDESRQI LNEIYAHSVKPEHIYRHQWRANDMVFWDNRSLTHLAAGCPAHLRRKLHRTTIQGTAPF
Sequences:
>Translated_298_residues MPAASLASSSAQPASQAFEVRPFTEKVGAEIVGLDLSRPLNDADFARVHQAHLDHHVVVFRDQQITPQQQIDFSRRFGVL QIHVLKQFLLANHPEILIVSNIVENDKPVGLGDAGKYWHSDLSYKELPSLGSMLYAQELPSEGGDTLFADMHLAWETLPQ HLRDAVEGRSAVHSYTARYAEGHNAANWRPTLTAEQLAQVVEVSHPIVRTHPENGRKALFVSEGFTTRILGLPEDESRQI LNEIYAHSVKPEHIYRHQWRANDMVFWDNRSLTHLAAGCPAHLRRKLHRTTIQGTAPF >Mature_297_residues PAASLASSSAQPASQAFEVRPFTEKVGAEIVGLDLSRPLNDADFARVHQAHLDHHVVVFRDQQITPQQQIDFSRRFGVLQ IHVLKQFLLANHPEILIVSNIVENDKPVGLGDAGKYWHSDLSYKELPSLGSMLYAQELPSEGGDTLFADMHLAWETLPQH LRDAVEGRSAVHSYTARYAEGHNAANWRPTLTAEQLAQVVEVSHPIVRTHPENGRKALFVSEGFTTRILGLPEDESRQIL NEIYAHSVKPEHIYRHQWRANDMVFWDNRSLTHLAAGCPAHLRRKLHRTTIQGTAPF
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=290, Percent_Identity=39.6551724137931, Blast_Score=194, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6322971, Length=268, Percent_Identity=30.9701492537313, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 33540; Mature: 33409
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAASLASSSAQPASQAFEVRPFTEKVGAEIVGLDLSRPLNDADFARVHQAHLDHHVVVF CCCCHHCCCCCCCHHHHEECCCHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEE RDQQITPQQQIDFSRRFGVLQIHVLKQFLLANHPEILIVSNIVENDKPVGLGDAGKYWHS ECCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECHHCCCCCCCCCCCCHHHHC DLSYKELPSLGSMLYAQELPSEGGDTLFADMHLAWETLPQHLRDAVEGRSAVHSYTARYA CCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGHNAANWRPTLTAEQLAQVVEVSHPIVRTHPENGRKALFVSEGFTTRILGLPEDESRQI CCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCEEEEECCCCHHHHHH LNEIYAHSVKPEHIYRHQWRANDMVFWDNRSLTHLAAGCPAHLRRKLHRTTIQGTAPF HHHHHHCCCCHHHHHHHHCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PAASLASSSAQPASQAFEVRPFTEKVGAEIVGLDLSRPLNDADFARVHQAHLDHHVVVF CCCHHCCCCCCCHHHHEECCCHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEE RDQQITPQQQIDFSRRFGVLQIHVLKQFLLANHPEILIVSNIVENDKPVGLGDAGKYWHS ECCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECHHCCCCCCCCCCCCHHHHC DLSYKELPSLGSMLYAQELPSEGGDTLFADMHLAWETLPQHLRDAVEGRSAVHSYTARYA CCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGHNAANWRPTLTAEQLAQVVEVSHPIVRTHPENGRKALFVSEGFTTRILGLPEDESRQI CCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCEEEEECCCCHHHHHH LNEIYAHSVKPEHIYRHQWRANDMVFWDNRSLTHLAAGCPAHLRRKLHRTTIQGTAPF HHHHHHCCCCHHHHHHHHCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]