| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043465
Identifier: 66043465
GI number: 66043465
Start: 205820
End: 206563
Strand: Reverse
Name: 66043465
Synonym: Psyr_0195
Alternate gene names: NA
Gene position: 206563-205820 (Counterclockwise)
Preceding gene: 66043466
Following gene: 66043463
Centisome position: 3.39
GC content: 50.4
Gene sequence:
>744_bases ATGACAACCTCCCCAACACACCCGATCGCTACAAAAAAACTCAAAGGCATCACCTCGGAATCAGAAGCTTTTGGAATAAC CAAACAATATCCAAACGGTAAGGAGATCCTGAGCTGGTCAATAAAAACCATTGCAAGACCGTCAAAAGAAATATTTTTTG CTGAAATGGCAATTATTTCAATCTATGCGGCGATGCTGAGCTTTGGCCTGTGGGCAGGATGGAGCTTTTATTCAAAAAAT CCGGTGCAAGCGATTTATATTTTAGCGAGTGCAAGTGGCGGAGCCATTTATTTTATTGTCTTGGGTGTCCGCCAAAAAAC CATCTACAACTACACCATCAAAACCAACCACGCCCTCGTTGAGTACCACCTCCACTACCCCGACTTCGCCTCATCCCTTT TCAAGGGCATCGCCATAGCCGTCATCCTGATATTCGTTTTTGTAGCACTCTTCACCGGCTCGCTGCTCTTCCTGATCGGC CCCGTGGCCATGGCTTTTATCGCAGCCATCAAGCTACTCAACTGGGAAAACCCCATCCACCATGAACAAAGCCTGCCATG GGCCGAGTACAACTTCGTCACTGTCGACCGCAAACGCTTGATGATCGTCACCCACCGCACCGACGTCACACTTGGCTTCG AGGCCCGCTTCCAGCACGAGGTCCTGTTCAACAAATACCTCGCGTTTCTCCGCGGCGCGCTGCCTCCAACGGCCGAGTTC ACCGAAAGGGCCTGGAAGTGGTAG
Upstream 100 bases:
>100_bases CGAGGGAGATACCAAGGTCGACGGCCTGATCACTGCTGAACTCGAAGTAAAAGCGCTAAACCGCAGCACTGCCTTGACTC TCGAAGTAGCGGAATAAACT
Downstream 100 bases:
>100_bases TCCTCATTACCGGTCTCAATAAGCACTCCCCGTAGGCCGCACCACAATCTCGCTCACATCCACCCCGTCCGGCTGCTCGA TTGCATAAACAAGCGCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTTSPTHPIATKKLKGITSESEAFGITKQYPNGKEILSWSIKTIARPSKEIFFAEMAIISIYAAMLSFGLWAGWSFYSKN PVQAIYILASASGGAIYFIVLGVRQKTIYNYTIKTNHALVEYHLHYPDFASSLFKGIAIAVILIFVFVALFTGSLLFLIG PVAMAFIAAIKLLNWENPIHHEQSLPWAEYNFVTVDRKRLMIVTHRTDVTLGFEARFQHEVLFNKYLAFLRGALPPTAEF TERAWKW
Sequences:
>Translated_247_residues MTTSPTHPIATKKLKGITSESEAFGITKQYPNGKEILSWSIKTIARPSKEIFFAEMAIISIYAAMLSFGLWAGWSFYSKN PVQAIYILASASGGAIYFIVLGVRQKTIYNYTIKTNHALVEYHLHYPDFASSLFKGIAIAVILIFVFVALFTGSLLFLIG PVAMAFIAAIKLLNWENPIHHEQSLPWAEYNFVTVDRKRLMIVTHRTDVTLGFEARFQHEVLFNKYLAFLRGALPPTAEF TERAWKW >Mature_246_residues TTSPTHPIATKKLKGITSESEAFGITKQYPNGKEILSWSIKTIARPSKEIFFAEMAIISIYAAMLSFGLWAGWSFYSKNP VQAIYILASASGGAIYFIVLGVRQKTIYNYTIKTNHALVEYHLHYPDFASSLFKGIAIAVILIFVFVALFTGSLLFLIGP VAMAFIAAIKLLNWENPIHHEQSLPWAEYNFVTVDRKRLMIVTHRTDVTLGFEARFQHEVLFNKYLAFLRGALPPTAEFT ERAWKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27977; Mature: 27846
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSPTHPIATKKLKGITSESEAFGITKQYPNGKEILSWSIKTIARPSKEIFFAEMAIIS CCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH IYAAMLSFGLWAGWSFYSKNPVQAIYILASASGGAIYFIVLGVRQKTIYNYTIKTNHALV HHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECEEEEEEEEEEECCCEEE EYHLHYPDFASSLFKGIAIAVILIFVFVALFTGSLLFLIGPVAMAFIAAIKLLNWENPIH EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC HEQSLPWAEYNFVTVDRKRLMIVTHRTDVTLGFEARFQHEVLFNKYLAFLRGALPPTAEF CCCCCCCCCCEEEEECCCEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHH TERAWKW HHHHCCC >Mature Secondary Structure TTSPTHPIATKKLKGITSESEAFGITKQYPNGKEILSWSIKTIARPSKEIFFAEMAIIS CCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH IYAAMLSFGLWAGWSFYSKNPVQAIYILASASGGAIYFIVLGVRQKTIYNYTIKTNHALV HHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECEEEEEEEEEEECCCEEE EYHLHYPDFASSLFKGIAIAVILIFVFVALFTGSLLFLIGPVAMAFIAAIKLLNWENPIH EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC HEQSLPWAEYNFVTVDRKRLMIVTHRTDVTLGFEARFQHEVLFNKYLAFLRGALPPTAEF CCCCCCCCCCEEEEECCCEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHH TERAWKW HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA