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The map label for this gene is yjbQ [H]

Identifier: 66043458

GI number: 66043458

Start: 199974

End: 200399

Strand: Reverse

Name: yjbQ [H]

Synonym: Psyr_0188

Alternate gene names: 66043458

Gene position: 200399-199974 (Counterclockwise)

Preceding gene: 66043459

Following gene: 66043457

Centisome position: 3.29

GC content: 60.56

Gene sequence:

>426_bases
ATGTGGCATCAATCCAGGATTGCCTTGCGGGCCAGGCCCCGCGGGTTCCATCTGGTGACTGACGAGATAGTCGCGGGGTT
GCCCCCGTTGCGCGGTTGTCGTGTCGGGCTACTGCATGTATGGCTGCAACATACCTCGGCTTCGTTGACCGTCAACGAAA
ATGCCGACCCGGCGGTACGTCGCGACTTTGAGCGTTTTTTCAACCGTCTGGTGCCCCAGGGCGTGGACGGCTACGAACAT
GACGACGAAGGCCCTGATGACTTGCCAGCGCATTTCAAGGCCAGTCTGCTGGGCTGCCAGTTGCTGTTGCCGGTTACGGC
AGGGCGACTGGCGCTGGGCACCTGGCAAGGTATTTACCTGGGCGAACATCGAGACGCTGGTGGGTCTCGTAACGTCCTGG
CCACCCTTCAGGGTGAGTGGACATAA

Upstream 100 bases:

>100_bases
TTGCCACCGTCTTCGTCAACTTGCAGGGAAGCCGGTTTATTGCGCGCTTTGCTTTTTTCTCAGTCGAGTTAGAATGCGCG
CCGAAGGTGCGGAGAACGGT

Downstream 100 bases:

>100_bases
CCGCTGAGGTCAGCGGTTGTTGAATTTTTCCGGTTGCCTTAGCAATTCTGGGCGGTTGGGCTATAACTAATCAGCTTTCG
CAAGTCATGAGGTACAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MWHQSRIALRARPRGFHLVTDEIVAGLPPLRGCRVGLLHVWLQHTSASLTVNENADPAVRRDFERFFNRLVPQGVDGYEH
DDEGPDDLPAHFKASLLGCQLLLPVTAGRLALGTWQGIYLGEHRDAGGSRNVLATLQGEWT

Sequences:

>Translated_141_residues
MWHQSRIALRARPRGFHLVTDEIVAGLPPLRGCRVGLLHVWLQHTSASLTVNENADPAVRRDFERFFNRLVPQGVDGYEH
DDEGPDDLPAHFKASLLGCQLLLPVTAGRLALGTWQGIYLGEHRDAGGSRNVLATLQGEWT
>Mature_141_residues
MWHQSRIALRARPRGFHLVTDEIVAGLPPLRGCRVGLLHVWLQHTSASLTVNENADPAVRRDFERFFNRLVPQGVDGYEH
DDEGPDDLPAHFKASLLGCQLLLPVTAGRLALGTWQGIYLGEHRDAGGSRNVLATLQGEWT

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=139, Percent_Identity=61.1510791366906, Blast_Score=175, Evalue=1e-45,
Organism=Drosophila melanogaster, GI221476594, Length=137, Percent_Identity=53.2846715328467, Blast_Score=151, Evalue=1e-37,
Organism=Drosophila melanogaster, GI221476589, Length=137, Percent_Identity=53.2846715328467, Blast_Score=150, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15669; Mature: 15669

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWHQSRIALRARPRGFHLVTDEIVAGLPPLRGCRVGLLHVWLQHTSASLTVNENADPAVR
CCCCCCEEEEECCCCCEEEHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHH
RDFERFFNRLVPQGVDGYEHDDEGPDDLPAHFKASLLGCQLLLPVTAGRLALGTWQGIYL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEEECCCCCEEE
GEHRDAGGSRNVLATLQGEWT
CCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MWHQSRIALRARPRGFHLVTDEIVAGLPPLRGCRVGLLHVWLQHTSASLTVNENADPAVR
CCCCCCEEEEECCCCCEEEHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHH
RDFERFFNRLVPQGVDGYEHDDEGPDDLPAHFKASLLGCQLLLPVTAGRLALGTWQGIYL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEEECCCCCEEE
GEHRDAGGSRNVLATLQGEWT
CCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]