Click here to switch to the map view.

The map label for this gene is 66043449

Identifier: 66043449

GI number: 66043449

Start: 194094

End: 194330

Strand: Reverse

Name: 66043449

Synonym: Psyr_0179

Alternate gene names: NA

Gene position: 194330-194094 (Counterclockwise)

Preceding gene: 66043450

Following gene: 66043448

Centisome position: 3.19

GC content: 65.82

Gene sequence:

>237_bases
GTGAGCCAGTCCCCCGTTCGACCGCCCAAGCCGCTTTTCAGCAATGTCAGCCCGGCAGTAGCCTCGCCGTGTATCAGCCT
GTGCCGGCTCGATGAGCAGAAGGTTTGCCTGGGATGCTTCCGTCATGTCGAAGACATCCGCGAATGGCGCTCGGCCGATG
ACGACCGGCGCCGCCAGATTCGCCACGAGGCCGATCAGCGTCGAGCCCGCGCCGAGGTTGACCAGGCGGCAGGCTGA

Upstream 100 bases:

>100_bases
GCTGGGCCTGCGATTCCAGTGATGAGCTGCTGAGCGAGATGCTGGAGCGCTTTACCGTCGAGCAGGCCGGTGTCGAACTG
GACTTCTCCGAGATCTGATC

Downstream 100 bases:

>100_bases
AACCGCGTCGGGTTGTGTATTTACTGCGCTGTGTTAGTGTCAGGCCTTGCCTCTGCAGACAAGAGGCTCGTCAAACCCCG
CCAATTGGTGGGGTTTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MSQSPVRPPKPLFSNVSPAVASPCISLCRLDEQKVCLGCFRHVEDIREWRSADDDRRRQIRHEADQRRARAEVDQAAG

Sequences:

>Translated_78_residues
MSQSPVRPPKPLFSNVSPAVASPCISLCRLDEQKVCLGCFRHVEDIREWRSADDDRRRQIRHEADQRRARAEVDQAAG
>Mature_77_residues
SQSPVRPPKPLFSNVSPAVASPCISLCRLDEQKVCLGCFRHVEDIREWRSADDDRRRQIRHEADQRRARAEVDQAAG

Specific function: Unknown

COG id: COG3313

COG function: function code R; Predicted Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8915; Mature: 8784

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSPVRPPKPLFSNVSPAVASPCISLCRLDEQKVCLGCFRHVEDIREWRSADDDRRRQI
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RHEADQRRARAEVDQAAG
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQSPVRPPKPLFSNVSPAVASPCISLCRLDEQKVCLGCFRHVEDIREWRSADDDRRRQI
CCCCCCCCCHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RHEADQRRARAEVDQAAG
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA