| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is gltP [H]
Identifier: 66043444
GI number: 66043444
Start: 188229
End: 189560
Strand: Direct
Name: gltP [H]
Synonym: Psyr_0174
Alternate gene names: 66043444
Gene position: 188229-189560 (Clockwise)
Preceding gene: 66043443
Following gene: 66043445
Centisome position: 3.09
GC content: 58.03
Gene sequence:
>1332_bases ATGAAGAAGGCAAAGCTGAGTCTGGCCTGGCAGATTCTGATCGGACTGGTACTGGGTATCGCTGTGGGGGCGCTACTCAA TCATTTCAGCGCAGAAAAGGCCTGGTGGATCACCAACATCCTGCAGCCCGCAGGCGATATCTTCATTCGTCTGATCAAGA TGATCGTTATTCCCATCGTTGTCGCCTCGCTGATCGTCGGCATCGCGGGCGTGGGCGATGCCAAGAAGCTGGGACGTATC GGTCTCAAGACCATTCTCTATTTTGAAGTCGTGACCACTATCGCGATTCTGGTGGGGCTGGTGCTGGCCAACGTGTTCCA TCCGGGCACCGGCATCGACATGAGCACACTGGGCACCGTCGATATTTCCAAGTATCAGCAGACGACGGCTGAAGTTCAGC ACGATCATGCGTTTATCGCGACCATTCTCAACCTGATCCCGTCCAACATCTTCGCCGCCATGGCGCGTGGCGAGATGCTG CCGATCATCTTCTTTTCGGTGTTGTTCGGCCTGGGGCTTTCCAGTCTGCAAGCCGAGGTCCGTGAGCCGCTGGTGAAGCT GTTTCAGGGCGTCTCGGAGACCATGTTCAAGGTCACTCACATGATCATGAACTACGCGCCGATTGGTGTGTTTGCCCTGA TTGCGGTGACTGTCGCCAACTTCGGCTTCGCCTCCCTGCTGCCGCTCGCCAAGCTGGTGATTCTGGTTTACGTGGCCATC GCCTTCTTCGCCTTCGTGGTGCTGGGGCTGATCGCTCGTGCATTCGGCTTTTCGGTCATCAGGCTGATGCGTATCTTCAA GGACGAGCTGATTCTGTCCTACTCCACGGCCAGCTCTGAAACCGTGCTGCCACGGGTGATCCAGAAGATGGAAGCCTATG GCGCACCGAAGGCGATTTGCAGTTTCGTGGTGCCCACGGGCTACTCGTTCAACCTTGACGGTTCGACGCTCTATCAGAGC ATCGCAGCCATCTTCATCGCTCAGTTGTACGGCATCGACCTGTCGATTGGCGCGCAATTGATGTTGGTGCTGACCCTGAT GGTCACCTCCAAAGGCATCGCGGGCGTACCGGGCGTTTCCTTCGTTGTGCTGCTGGCGACCCTGGGCAGCGCCGGTATTC CACTGGAAGGCCTGGCGTTCATCGCTGGCGTCGACCGCATCATGGACATGGCGCGTACCGCTTTGAACGTGATCGGCAAT GCGCTGGCAGTGCTGGTTATCTCGCGCTGGGAGGGCATGTATGACGATGCCAAGGGCGAGCGCTACTGGAACTCCCTGCC GCACTGGCGCAGCAAAGAGCCAGTGCCGATGGGGCAACCGACGGCGGACTGA
Upstream 100 bases:
>100_bases CATTTCCAAAGGGAGCTCCTGCCTCGAAACTGCTGTGAAAAAGCATGCTCGGTGCACGGGTTTTGGACTTGCCCAAGCCA CTTTGAACAAGGGTAATAAT
Downstream 100 bases:
>100_bases TCTTCGCTATGTGCTGACAAGCCCCGGACCTCCGGGGTTTGTTGTTTTCAGGTCGCCGGTTAGACTGCCTGCCTTACCTG AGGAGTGACCATGACCGACG
Product: glutamate/aspartate:proton symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MKKAKLSLAWQILIGLVLGIAVGALLNHFSAEKAWWITNILQPAGDIFIRLIKMIVIPIVVASLIVGIAGVGDAKKLGRI GLKTILYFEVVTTIAILVGLVLANVFHPGTGIDMSTLGTVDISKYQQTTAEVQHDHAFIATILNLIPSNIFAAMARGEML PIIFFSVLFGLGLSSLQAEVREPLVKLFQGVSETMFKVTHMIMNYAPIGVFALIAVTVANFGFASLLPLAKLVILVYVAI AFFAFVVLGLIARAFGFSVIRLMRIFKDELILSYSTASSETVLPRVIQKMEAYGAPKAICSFVVPTGYSFNLDGSTLYQS IAAIFIAQLYGIDLSIGAQLMLVLTLMVTSKGIAGVPGVSFVVLLATLGSAGIPLEGLAFIAGVDRIMDMARTALNVIGN ALAVLVISRWEGMYDDAKGERYWNSLPHWRSKEPVPMGQPTAD
Sequences:
>Translated_443_residues MKKAKLSLAWQILIGLVLGIAVGALLNHFSAEKAWWITNILQPAGDIFIRLIKMIVIPIVVASLIVGIAGVGDAKKLGRI GLKTILYFEVVTTIAILVGLVLANVFHPGTGIDMSTLGTVDISKYQQTTAEVQHDHAFIATILNLIPSNIFAAMARGEML PIIFFSVLFGLGLSSLQAEVREPLVKLFQGVSETMFKVTHMIMNYAPIGVFALIAVTVANFGFASLLPLAKLVILVYVAI AFFAFVVLGLIARAFGFSVIRLMRIFKDELILSYSTASSETVLPRVIQKMEAYGAPKAICSFVVPTGYSFNLDGSTLYQS IAAIFIAQLYGIDLSIGAQLMLVLTLMVTSKGIAGVPGVSFVVLLATLGSAGIPLEGLAFIAGVDRIMDMARTALNVIGN ALAVLVISRWEGMYDDAKGERYWNSLPHWRSKEPVPMGQPTAD >Mature_443_residues MKKAKLSLAWQILIGLVLGIAVGALLNHFSAEKAWWITNILQPAGDIFIRLIKMIVIPIVVASLIVGIAGVGDAKKLGRI GLKTILYFEVVTTIAILVGLVLANVFHPGTGIDMSTLGTVDISKYQQTTAEVQHDHAFIATILNLIPSNIFAAMARGEML PIIFFSVLFGLGLSSLQAEVREPLVKLFQGVSETMFKVTHMIMNYAPIGVFALIAVTVANFGFASLLPLAKLVILVYVAI AFFAFVVLGLIARAFGFSVIRLMRIFKDELILSYSTASSETVLPRVIQKMEAYGAPKAICSFVVPTGYSFNLDGSTLYQS IAAIFIAQLYGIDLSIGAQLMLVLTLMVTSKGIAGVPGVSFVVLLATLGSAGIPLEGLAFIAGVDRIMDMARTALNVIGN ALAVLVISRWEGMYDDAKGERYWNSLPHWRSKEPVPMGQPTAD
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI40254478, Length=490, Percent_Identity=25.9183673469388, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI21314632, Length=439, Percent_Identity=27.1070615034169, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI169790839, Length=424, Percent_Identity=26.6509433962264, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI66773030, Length=455, Percent_Identity=28.3516483516484, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI5032093, Length=417, Percent_Identity=27.3381294964029, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI4827012, Length=256, Percent_Identity=32.03125, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI223468564, Length=291, Percent_Identity=28.5223367697594, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI223468566, Length=291, Percent_Identity=28.5223367697594, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI262359914, Length=365, Percent_Identity=25.2054794520548, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI194239697, Length=257, Percent_Identity=29.5719844357977, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI301601644, Length=203, Percent_Identity=30.5418719211823, Blast_Score=86, Evalue=5e-17, Organism=Escherichia coli, GI1790514, Length=423, Percent_Identity=73.9952718676123, Blast_Score=622, Evalue=1e-179, Organism=Escherichia coli, GI1789947, Length=431, Percent_Identity=38.9791183294664, Blast_Score=313, Evalue=1e-86, Organism=Escherichia coli, GI1788024, Length=384, Percent_Identity=25.5208333333333, Blast_Score=103, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71983099, Length=483, Percent_Identity=26.7080745341615, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI71983106, Length=451, Percent_Identity=26.8292682926829, Blast_Score=151, Evalue=5e-37, Organism=Caenorhabditis elegans, GI71996953, Length=461, Percent_Identity=27.765726681128, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17537407, Length=424, Percent_Identity=27.122641509434, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI193206505, Length=464, Percent_Identity=28.0172413793103, Blast_Score=141, Evalue=5e-34, Organism=Caenorhabditis elegans, GI193206654, Length=460, Percent_Identity=25.8695652173913, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17541374, Length=407, Percent_Identity=25.3071253071253, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24583025, Length=467, Percent_Identity=25.2676659528908, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI17137668, Length=467, Percent_Identity=25.2676659528908, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24583023, Length=467, Percent_Identity=25.2676659528908, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI281360481, Length=472, Percent_Identity=27.5423728813559, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI281360483, Length=471, Percent_Identity=26.963906581741, Blast_Score=102, Evalue=7e-22, Organism=Drosophila melanogaster, GI17137666, Length=471, Percent_Identity=26.963906581741, Blast_Score=102, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 47695; Mature: 47695
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: PS00713 NA_DICARBOXYL_SYMP_1 ; PS00714 NA_DICARBOXYL_SYMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAKLSLAWQILIGLVLGIAVGALLNHFSAEKAWWITNILQPAGDIFIRLIKMIVIPIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VASLIVGIAGVGDAKKLGRIGLKTILYFEVVTTIAILVGLVLANVFHPGTGIDMSTLGTV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCH DISKYQQTTAEVQHDHAFIATILNLIPSNIFAAMARGEMLPIIFFSVLFGLGLSSLQAEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHH REPLVKLFQGVSETMFKVTHMIMNYAPIGVFALIAVTVANFGFASLLPLAKLVILVYVAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AFFAFVVLGLIARAFGFSVIRLMRIFKDELILSYSTASSETVLPRVIQKMEAYGAPKAIC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCHHHHH SFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIGAQLMLVLTLMVTSKGIAGVPGVS HHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH FVVLLATLGSAGIPLEGLAFIAGVDRIMDMARTALNVIGNALAVLVISRWEGMYDDAKGE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH RYWNSLPHWRSKEPVPMGQPTAD HHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKAKLSLAWQILIGLVLGIAVGALLNHFSAEKAWWITNILQPAGDIFIRLIKMIVIPIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VASLIVGIAGVGDAKKLGRIGLKTILYFEVVTTIAILVGLVLANVFHPGTGIDMSTLGTV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCH DISKYQQTTAEVQHDHAFIATILNLIPSNIFAAMARGEMLPIIFFSVLFGLGLSSLQAEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHH REPLVKLFQGVSETMFKVTHMIMNYAPIGVFALIAVTVANFGFASLLPLAKLVILVYVAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AFFAFVVLGLIARAFGFSVIRLMRIFKDELILSYSTASSETVLPRVIQKMEAYGAPKAIC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCHHHHH SFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIGAQLMLVLTLMVTSKGIAGVPGVS HHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH FVVLLATLGSAGIPLEGLAFIAGVDRIMDMARTALNVIGNALAVLVISRWEGMYDDAKGE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH RYWNSLPHWRSKEPVPMGQPTAD HHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]