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The map label for this gene is rimK [H]

Identifier: 66043442

GI number: 66043442

Start: 186394

End: 186870

Strand: Direct

Name: rimK [H]

Synonym: Psyr_0172

Alternate gene names: 66043442

Gene position: 186394-186870 (Clockwise)

Preceding gene: 66043441

Following gene: 66043443

Centisome position: 3.06

GC content: 58.28

Gene sequence:

>477_bases
TTGAAGACATTCGATCATCTGACAGTCATCGGCCTGCGCGAGTGGGTGGCGCTCCCCGACCTGGGGGTGGCAGGTCTGCG
GGCAAAAATCGATACCGGTGCGAGCACGTCGAGTCTGCATGCCACGGAAATCGAACCTTTTGAGCGCAATGGCCAGAAAT
GGGTGCGCTTCAACGCGCATCTGGGCACGGTGGTTCAGTTGCGGCATCGTCGCTGCGAAGCGCAACTGGTTGCCATGAAA
ACCATTAAAAGCTCCAACGGTCAGGCGCAGGTGCGCTATGTCATTCGCACCACGCTGGCCCTGGGTGATCGTATCTGGCC
GGTGGAATTCACACTGGCCTGCCGCAAGTCGATGCGTTATCGACTGCTGCTGGGTTCCAAGGCTCTGATCGACGGCCAGC
TGGTGGTCAATCCGGGCATAACTTACGTACAAGACAAGCCGGTGTTCCCGGCCTCTACTTCCTCAGGTGTTGCATGA

Upstream 100 bases:

>100_bases
TCCCTGATGCAAGGCTATCTGTTCGCCAAACCCGCATTCAAAGCCCTGGCTCAGGTAGCCCCCGAGGCCTGGCAGAAGTC
TTGAGAAGTACGGAATCGCA

Downstream 100 bases:

>100_bases
AGATCGCTGTGCTTTCGCGTAATCCGCGTCTGTATTCCACCCGTCGTCTGGTCGAAGCTGGCATCGAGCGTGGCCATGAG
ATGGTGGTGATCGACACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKTFDHLTVIGLREWVALPDLGVAGLRAKIDTGASTSSLHATEIEPFERNGQKWVRFNAHLGTVVQLRHRRCEAQLVAMK
TIKSSNGQAQVRYVIRTTLALGDRIWPVEFTLACRKSMRYRLLLGSKALIDGQLVVNPGITYVQDKPVFPASTSSGVA

Sequences:

>Translated_158_residues
MKTFDHLTVIGLREWVALPDLGVAGLRAKIDTGASTSSLHATEIEPFERNGQKWVRFNAHLGTVVQLRHRRCEAQLVAMK
TIKSSNGQAQVRYVIRTTLALGDRIWPVEFTLACRKSMRYRLLLGSKALIDGQLVVNPGITYVQDKPVFPASTSSGVA
>Mature_158_residues
MKTFDHLTVIGLREWVALPDLGVAGLRAKIDTGASTSSLHATEIEPFERNGQKWVRFNAHLGTVVQLRHRRCEAQLVAMK
TIKSSNGQAQVRYVIRTTLALGDRIWPVEFTLACRKSMRYRLLLGSKALIDGQLVVNPGITYVQDKPVFPASTSSGVA

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 17488; Mature: 17488

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFDHLTVIGLREWVALPDLGVAGLRAKIDTGASTSSLHATEIEPFERNGQKWVRFNAH
CCCCCCEEEEEHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEECC
LGTVVQLRHRRCEAQLVAMKTIKSSNGQAQVRYVIRTTLALGDRIWPVEFTLACRKSMRY
CCHHHHHHHHHHHHHHHHEEHHCCCCCCEEEEEEEEHHHHHCCEECCEEEEHHHHHCCEE
RLLLGSKALIDGQLVVNPGITYVQDKPVFPASTSSGVA
EEEECCCEEECCEEEECCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKTFDHLTVIGLREWVALPDLGVAGLRAKIDTGASTSSLHATEIEPFERNGQKWVRFNAH
CCCCCCEEEEEHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEECC
LGTVVQLRHRRCEAQLVAMKTIKSSNGQAQVRYVIRTTLALGDRIWPVEFTLACRKSMRY
CCHHHHHHHHHHHHHHHHEEHHCCCCCCEEEEEEEEHHHHHCCEECCEEEEHHHHHCCEE
RLLLGSKALIDGQLVVNPGITYVQDKPVFPASTSSGVA
EEEECCCEEECCEEEECCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA