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The map label for this gene is yejE [H]

Identifier: 66043411

GI number: 66043411

Start: 152409

End: 153431

Strand: Direct

Name: yejE [H]

Synonym: Psyr_0141

Alternate gene names: 66043411

Gene position: 152409-153431 (Clockwise)

Preceding gene: 66043410

Following gene: 66043412

Centisome position: 2.5

GC content: 63.83

Gene sequence:

>1023_bases
ATGTTCGAGTTCTCTCCCCAGACCCGGCGCCGCTTCGACCTGTTCAAGGCCAACCGTCGCGGTTGGTGGTCGCTGTGGAT
CTTCATCGGCCTGCTGCTGGTGTGCCTGTGCGGCGAACTGATCGCCAACGACAAGCCGCTGCTGATCCGCTACGACGGGC
AGTTGTATTACCCGGTGTTGCACACCTACATGGAAACCGATTTCGGCGGCGAGCTGCCCTTCGAGCCGGACTATGCCAGC
GACTACGTGCGCAAGCTGATCGCGGCAAAAAACGGCTGGATGCTGTTCGCGCCGATCCCGTTCAGCTACGACACCATCAA
CTACGACCTGGACGCGCCATCGCCCAGTCCGCCGGACCACATCAATTGGCTGGGCACCGACGAGCAGGCCCGTGATGTGC
TGGCGCGTGTGCTGTTCGGCGCGCGGATTTCCATTCTGTTCGCGCTGCTGCTGACCGCGATCAGCACGGTGATCGGCGTG
TGTGCCGGGGCGATTCAGGGTTACTACGGCGGCATGACCGACCTGATCGGCCAGCGCATTCAGGAGATCTGGTCGGGGCT
GCCGGTGCTGTACCTGCTGATCATTCTGTCCGGCTTTGTGTCGCCGAGTTTCTGGTGGCTGCTGGGGATCATGGCGCTGT
TCTCCTGGCTGTCGCTGGTGGACGTGGTGCGTGCCGAGTTCCTGCGCGGGCGCAACCTGGAATACGTCAAGGCCGCCCGC
GCACTGGGCCTGACCGATGCCGCGCTGATGTGGCGGCACATCCTGCCCAACGCGATGACCAGCACCCTGACTTACCTGCC
GTTCATCATCACCGGCGCCATCGCCACCCTCACTGCGCTGGATTTTCTCGGCTTCGGCATGCCGGCGGGCAGTGCGTCGC
TGGGCGAGCTGATCGGCGAGGCCAAGCGCAATCTGCAAGCGCCCTGGCTGGGGCTGACGGCGTTCGTGGTGCTGGCCCTG
ATTCTTTCTCTGCTGGTGTTCATCGGCGAAGCCTGCCGCGACGCGTTCGATCCTCGGAGCTGA

Upstream 100 bases:

>100_bases
TGTTTCTGTTCACGCTGTTCGGCCTGCTGATCAAGCTGATCGGTGACCTGTGTTACACGCTGGTCGACGCACGCATCGAC
TTTTCCGCGAGGAGCGCCTG

Downstream 100 bases:

>100_bases
CATGCACGACAACCTGATTGAAATTCGCGACCTGCGGGTCGCCTTCAACGGCCACGAAGTGGTGCATGGCGTCAGCCTCG
ACATCCGCCGTGGCGAGTGC

Product: binding-protein dependent transport system inner membrane protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MFEFSPQTRRRFDLFKANRRGWWSLWIFIGLLLVCLCGELIANDKPLLIRYDGQLYYPVLHTYMETDFGGELPFEPDYAS
DYVRKLIAAKNGWMLFAPIPFSYDTINYDLDAPSPSPPDHINWLGTDEQARDVLARVLFGARISILFALLLTAISTVIGV
CAGAIQGYYGGMTDLIGQRIQEIWSGLPVLYLLIILSGFVSPSFWWLLGIMALFSWLSLVDVVRAEFLRGRNLEYVKAAR
ALGLTDAALMWRHILPNAMTSTLTYLPFIITGAIATLTALDFLGFGMPAGSASLGELIGEAKRNLQAPWLGLTAFVVLAL
ILSLLVFIGEACRDAFDPRS

Sequences:

>Translated_340_residues
MFEFSPQTRRRFDLFKANRRGWWSLWIFIGLLLVCLCGELIANDKPLLIRYDGQLYYPVLHTYMETDFGGELPFEPDYAS
DYVRKLIAAKNGWMLFAPIPFSYDTINYDLDAPSPSPPDHINWLGTDEQARDVLARVLFGARISILFALLLTAISTVIGV
CAGAIQGYYGGMTDLIGQRIQEIWSGLPVLYLLIILSGFVSPSFWWLLGIMALFSWLSLVDVVRAEFLRGRNLEYVKAAR
ALGLTDAALMWRHILPNAMTSTLTYLPFIITGAIATLTALDFLGFGMPAGSASLGELIGEAKRNLQAPWLGLTAFVVLAL
ILSLLVFIGEACRDAFDPRS
>Mature_340_residues
MFEFSPQTRRRFDLFKANRRGWWSLWIFIGLLLVCLCGELIANDKPLLIRYDGQLYYPVLHTYMETDFGGELPFEPDYAS
DYVRKLIAAKNGWMLFAPIPFSYDTINYDLDAPSPSPPDHINWLGTDEQARDVLARVLFGARISILFALLLTAISTVIGV
CAGAIQGYYGGMTDLIGQRIQEIWSGLPVLYLLIILSGFVSPSFWWLLGIMALFSWLSLVDVVRAEFLRGRNLEYVKAAR
ALGLTDAALMWRHILPNAMTSTLTYLPFIITGAIATLTALDFLGFGMPAGSASLGELIGEAKRNLQAPWLGLTAFVVLAL
ILSLLVFIGEACRDAFDPRS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4239

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=340, Percent_Identity=58.8235294117647, Blast_Score=418, Evalue=1e-118,
Organism=Escherichia coli, GI1787498, Length=250, Percent_Identity=28.8, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1787054, Length=241, Percent_Identity=30.2904564315353, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1787760, Length=249, Percent_Identity=31.7269076305221, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789964, Length=218, Percent_Identity=33.4862385321101, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787549, Length=253, Percent_Identity=29.2490118577075, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1789889, Length=244, Percent_Identity=27.0491803278689, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37922; Mature: 37922

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEFSPQTRRRFDLFKANRRGWWSLWIFIGLLLVCLCGELIANDKPLLIRYDGQLYYPVL
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEHHHHH
HTYMETDFGGELPFEPDYASDYVRKLIAAKNGWMLFAPIPFSYDTINYDLDAPSPSPPDH
HHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCCCCCCC
INWLGTDEQARDVLARVLFGARISILFALLLTAISTVIGVCAGAIQGYYGGMTDLIGQRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QEIWSGLPVLYLLIILSGFVSPSFWWLLGIMALFSWLSLVDVVRAEFLRGRNLEYVKAAR
HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ALGLTDAALMWRHILPNAMTSTLTYLPFIITGAIATLTALDFLGFGMPAGSASLGELIGE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
AKRNLQAPWLGLTAFVVLALILSLLVFIGEACRDAFDPRS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFEFSPQTRRRFDLFKANRRGWWSLWIFIGLLLVCLCGELIANDKPLLIRYDGQLYYPVL
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEHHHHH
HTYMETDFGGELPFEPDYASDYVRKLIAAKNGWMLFAPIPFSYDTINYDLDAPSPSPPDH
HHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCCCCCCC
INWLGTDEQARDVLARVLFGARISILFALLLTAISTVIGVCAGAIQGYYGGMTDLIGQRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QEIWSGLPVLYLLIILSGFVSPSFWWLLGIMALFSWLSLVDVVRAEFLRGRNLEYVKAAR
HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ALGLTDAALMWRHILPNAMTSTLTYLPFIITGAIATLTALDFLGFGMPAGSASLGELIGE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
AKRNLQAPWLGLTAFVVLALILSLLVFIGEACRDAFDPRS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]