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The map label for this gene is yejB [H]

Identifier: 66043410

GI number: 66043410

Start: 151342

End: 152409

Strand: Direct

Name: yejB [H]

Synonym: Psyr_0140

Alternate gene names: 66043410

Gene position: 151342-152409 (Clockwise)

Preceding gene: 66043409

Following gene: 66043411

Centisome position: 2.48

GC content: 61.7

Gene sequence:

>1068_bases
ATGCTGGCTTATGTGATTCGACGCCTGCTGCTGATCATTCCCACGCTGCTGGCCATTCTGATCGTCAACTTCCTGATCGT
GCAGGCCGCCCCCGGCGGACCGGTCGAGCAGGCCATTGCGCGCATTCAGGGCTTCAGCCCCAACGGTGTGGGCGGCGGCG
GGGGCGAAGTGGCTGCCTCCGGCACTGCGAGCCGCAGCACCCGCGGGCTGGACCCGGCGCTGATCGAGCAGATCAAGCAA
CACTACGGTTTCGACAAACCGATGCACGAACGGCTGTGGCTGATGCTCAAGAACTACGCGCAACTGGACTTCGGCACCAG
CTTCTTCCGTGGCGCGCCGGTCACCGAACTGATCGCGCAAAAGCTTCCGGTGTCGCTGTCCCTCGGGCTCTGGGCGACGC
TGATCACGTACCTGATTTCCATCCCGCTGGGCATTCGCAAGGCGGTGCGGCATGGCAGTGCGTTTGATGTCTGGAGCAGC
ACGCTGGTGATCATCGGTTACGCCACGCCCGCGTTTCTGTTCGCCATTCTGCTGATCGTGGTGTTCGCCGGGGGCAGTTA
CCTGAGCTGGTTTCCGGCGCAGGGGCTGTTCTCGGACAACTTCGACAGCCTGAGCACCTGGGGCAAGGTGAAGGACTACC
TGTGGCACTTGGTGCTGCCGGTCAGTTCGCTGGTGATCGGCGGGTTCGCCACGCTGACCATCCTCACCAAGAACAGCTTT
CTCAACGAGATCAGCCGCCAGTACGTGGTCACGGCGCGCGCCAAGGGCCTGACCGAGCATCGCGTGCTGTACGGCCATGT
GTTTCGCAACGCCATGTTGCTGGTGATCGCCGGTATTCCACAGGCCTTGATCGAAGTGTTTTTCGCCGGCTCGTTGCTGA
TCGAAACCATCTTCGGCCTCGATGGTTTGGGGCGTATGAGTTACGAAGCGGCGGTGTCGCGCGACTACCCGATTGTGTTC
GGCACGCTGTTTCTGTTCACGCTGTTCGGCCTGCTGATCAAGCTGATCGGTGACCTGTGTTACACGCTGGTCGACGCACG
CATCGACTTTTCCGCGAGGAGCGCCTGA

Upstream 100 bases:

>100_bases
GTGGGCCTGGAAACCTGGTGGCAGATCAGCCCGACGCCGCTGACCAATGCTCAGGCCACTGCGCTGACCGGCAAGCCTGC
CGCCGCCAAGGAGTACTGAG

Downstream 100 bases:

>100_bases
TGTTCGAGTTCTCTCCCCAGACCCGGCGCCGCTTCGACCTGTTCAAGGCCAACCGTCGCGGTTGGTGGTCGCTGTGGATC
TTCATCGGCCTGCTGCTGGT

Product: binding-protein dependent transport system inner membrane protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MLAYVIRRLLLIIPTLLAILIVNFLIVQAAPGGPVEQAIARIQGFSPNGVGGGGGEVAASGTASRSTRGLDPALIEQIKQ
HYGFDKPMHERLWLMLKNYAQLDFGTSFFRGAPVTELIAQKLPVSLSLGLWATLITYLISIPLGIRKAVRHGSAFDVWSS
TLVIIGYATPAFLFAILLIVVFAGGSYLSWFPAQGLFSDNFDSLSTWGKVKDYLWHLVLPVSSLVIGGFATLTILTKNSF
LNEISRQYVVTARAKGLTEHRVLYGHVFRNAMLLVIAGIPQALIEVFFAGSLLIETIFGLDGLGRMSYEAAVSRDYPIVF
GTLFLFTLFGLLIKLIGDLCYTLVDARIDFSARSA

Sequences:

>Translated_355_residues
MLAYVIRRLLLIIPTLLAILIVNFLIVQAAPGGPVEQAIARIQGFSPNGVGGGGGEVAASGTASRSTRGLDPALIEQIKQ
HYGFDKPMHERLWLMLKNYAQLDFGTSFFRGAPVTELIAQKLPVSLSLGLWATLITYLISIPLGIRKAVRHGSAFDVWSS
TLVIIGYATPAFLFAILLIVVFAGGSYLSWFPAQGLFSDNFDSLSTWGKVKDYLWHLVLPVSSLVIGGFATLTILTKNSF
LNEISRQYVVTARAKGLTEHRVLYGHVFRNAMLLVIAGIPQALIEVFFAGSLLIETIFGLDGLGRMSYEAAVSRDYPIVF
GTLFLFTLFGLLIKLIGDLCYTLVDARIDFSARSA
>Mature_355_residues
MLAYVIRRLLLIIPTLLAILIVNFLIVQAAPGGPVEQAIARIQGFSPNGVGGGGGEVAASGTASRSTRGLDPALIEQIKQ
HYGFDKPMHERLWLMLKNYAQLDFGTSFFRGAPVTELIAQKLPVSLSLGLWATLITYLISIPLGIRKAVRHGSAFDVWSS
TLVIIGYATPAFLFAILLIVVFAGGSYLSWFPAQGLFSDNFDSLSTWGKVKDYLWHLVLPVSSLVIGGFATLTILTKNSF
LNEISRQYVVTARAKGLTEHRVLYGHVFRNAMLLVIAGIPQALIEVFFAGSLLIETIFGLDGLGRMSYEAAVSRDYPIVF
GTLFLFTLFGLLIKLIGDLCYTLVDARIDFSARSA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=365, Percent_Identity=62.4657534246575, Blast_Score=442, Evalue=1e-125,
Organism=Escherichia coli, GI1789965, Length=364, Percent_Identity=31.3186813186813, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1787053, Length=351, Percent_Identity=30.7692307692308, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1787497, Length=351, Percent_Identity=27.9202279202279, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1789888, Length=348, Percent_Identity=28.1609195402299, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI1787761, Length=263, Percent_Identity=30.0380228136882, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1787550, Length=253, Percent_Identity=23.7154150197628, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38723; Mature: 38723

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAYVIRRLLLIIPTLLAILIVNFLIVQAAPGGPVEQAIARIQGFSPNGVGGGGGEVAAS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
GTASRSTRGLDPALIEQIKQHYGFDKPMHERLWLMLKNYAQLDFGTSFFRGAPVTELIAQ
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHH
KLPVSLSLGLWATLITYLISIPLGIRKAVRHGSAFDVWSSTLVIIGYATPAFLFAILLIV
HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCEEEEEECCCHHHHHHHHHHH
VFAGGSYLSWFPAQGLFSDNFDSLSTWGKVKDYLWHLVLPVSSLVIGGFATLTILTKNSF
HHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHH
LNEISRQYVVTARAKGLTEHRVLYGHVFRNAMLLVIAGIPQALIEVFFAGSLLIETIFGL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
DGLGRMSYEAAVSRDYPIVFGTLFLFTLFGLLIKLIGDLCYTLVDARIDFSARSA
CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLAYVIRRLLLIIPTLLAILIVNFLIVQAAPGGPVEQAIARIQGFSPNGVGGGGGEVAAS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
GTASRSTRGLDPALIEQIKQHYGFDKPMHERLWLMLKNYAQLDFGTSFFRGAPVTELIAQ
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHH
KLPVSLSLGLWATLITYLISIPLGIRKAVRHGSAFDVWSSTLVIIGYATPAFLFAILLIV
HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCEEEEEECCCHHHHHHHHHHH
VFAGGSYLSWFPAQGLFSDNFDSLSTWGKVKDYLWHLVLPVSSLVIGGFATLTILTKNSF
HHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHH
LNEISRQYVVTARAKGLTEHRVLYGHVFRNAMLLVIAGIPQALIEVFFAGSLLIETIFGL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
DGLGRMSYEAAVSRDYPIVFGTLFLFTLFGLLIKLIGDLCYTLVDARIDFSARSA
CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]