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The map label for this gene is tonB2 [H]

Identifier: 66043405

GI number: 66043405

Start: 144401

End: 145225

Strand: Direct

Name: tonB2 [H]

Synonym: Psyr_0135

Alternate gene names: 66043405

Gene position: 144401-145225 (Clockwise)

Preceding gene: 66043404

Following gene: 66043406

Centisome position: 2.37

GC content: 64.48

Gene sequence:

>825_bases
ATGAATGATGCGGTCATAATGAAAGCGGTCCCCTCTCCCTCGCCCGATGACACTTCGACGGCGTGGCAGGGTATTCCTTT
CAGCGCCAATACGTCACGCCCGGGCGGCCTTAACAAGCCGCAAGTAATGGTGTTGATTGCTGCGTCGGTACTTATTCATG
GTGTGATCTGGTGGTACATGCAAACGGCCCAGCCAGACGTGCCGGAAGTTGCGCCACAAGTTCCGGAAATGACCATTGAA
CTGACCAGCCCGACACCACCCGCACCGGAACCGCCGCCGCCCGAGCCACCACCTCCGCCGCCGCCTCCACCGCCTCCCCC
CGAACCGGAACAACCGGTCGAGGACCCGGACGCGGTCGAACCGCCGCCCAAACCGGTGGAAAAACCCAAGGTCGAGAAGC
CCAAGCCGGTCAAGAAAGTCGAACCGGTGAAAAAGCCTACGCCGCCTGCGCCAACGCCTGCCGCCGCACCCAGCCCGCCC
GCGCCGCCAACACCTGCGCCCGCGCCGCCGGCACCTGCTGCGCCACCGGCTCCGGTCAAGGAAAGCGCTGCGGTATCCGG
GCTCGCCAGCCTGGGCAATCCACCGCCGGAATACCCGGGGCTGGCCTTGCGACGCAGTTGGGAAGGTCGCGTGATTCTGC
GCATCAAGGTGCTGCCCAATGGCCGCGCCGGGGCTGTCGAGGTGACCAAATCCAGCGGCAAACCGGTACTGGACGAAGCG
GCCGTGGAGGCTGTGCGCAACTGGAAGTTCATACCGGCCAAACGCGGTGACACGCCGATAGAAGGCTTCGCGACGCAGAC
CATCGACTTCAAGTTGCCGGAATGA

Upstream 100 bases:

>100_bases
TTGCCCTGCCCATCAACAATGTGCAGGTCTTCATCAATCGAACAGTGGCCCATTGTTCGAGCGGAATCTTATTGCCCTTT
AACTACCCGAGGGAGCGTTA

Downstream 100 bases:

>100_bases
TCCGGCGCATGACAACCGACTATTCAATTATCAAAGCTGGTGAGGTTTAAACCATGAACGCATCGCTCTCTTCCATGATC
GTCCCCGCCGTGCTCTGGGC

Product: TonB, C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNDAVIMKAVPSPSPDDTSTAWQGIPFSANTSRPGGLNKPQVMVLIAASVLIHGVIWWYMQTAQPDVPEVAPQVPEMTIE
LTSPTPPAPEPPPPEPPPPPPPPPPPPEPEQPVEDPDAVEPPPKPVEKPKVEKPKPVKKVEPVKKPTPPAPTPAAAPSPP
APPTPAPAPPAPAAPPAPVKESAAVSGLASLGNPPPEYPGLALRRSWEGRVILRIKVLPNGRAGAVEVTKSSGKPVLDEA
AVEAVRNWKFIPAKRGDTPIEGFATQTIDFKLPE

Sequences:

>Translated_274_residues
MNDAVIMKAVPSPSPDDTSTAWQGIPFSANTSRPGGLNKPQVMVLIAASVLIHGVIWWYMQTAQPDVPEVAPQVPEMTIE
LTSPTPPAPEPPPPEPPPPPPPPPPPPEPEQPVEDPDAVEPPPKPVEKPKVEKPKPVKKVEPVKKPTPPAPTPAAAPSPP
APPTPAPAPPAPAAPPAPVKESAAVSGLASLGNPPPEYPGLALRRSWEGRVILRIKVLPNGRAGAVEVTKSSGKPVLDEA
AVEAVRNWKFIPAKRGDTPIEGFATQTIDFKLPE
>Mature_274_residues
MNDAVIMKAVPSPSPDDTSTAWQGIPFSANTSRPGGLNKPQVMVLIAASVLIHGVIWWYMQTAQPDVPEVAPQVPEMTIE
LTSPTPPAPEPPPPEPPPPPPPPPPPPEPEQPVEDPDAVEPPPKPVEKPKVEKPKPVKKVEPVKKPTPPAPTPAAAPSPP
APPTPAPAPPAPAAPPAPVKESAAVSGLASLGNPPPEYPGLALRRSWEGRVILRIKVLPNGRAGAVEVTKSSGKPVLDEA
AVEAVRNWKFIPAKRGDTPIEGFATQTIDFKLPE

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 28749; Mature: 28749

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDAVIMKAVPSPSPDDTSTAWQGIPFSANTSRPGGLNKPQVMVLIAASVLIHGVIWWYM
CCCCEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QTAQPDVPEVAPQVPEMTIELTSPTPPAPEPPPPEPPPPPPPPPPPPEPEQPVEDPDAVE
HCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPPKPVEKPKVEKPKPVKKVEPVKKPTPPAPTPAAAPSPPAPPTPAPAPPAPAAPPAPVK
CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ESAAVSGLASLGNPPPEYPGLALRRSWEGRVILRIKVLPNGRAGAVEVTKSSGKPVLDEA
HHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCCCHHHH
AVEAVRNWKFIPAKRGDTPIEGFATQTIDFKLPE
HHHHHHCCEEEECCCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MNDAVIMKAVPSPSPDDTSTAWQGIPFSANTSRPGGLNKPQVMVLIAASVLIHGVIWWYM
CCCCEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QTAQPDVPEVAPQVPEMTIELTSPTPPAPEPPPPEPPPPPPPPPPPPEPEQPVEDPDAVE
HCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPPKPVEKPKVEKPKPVKKVEPVKKPTPPAPTPAAAPSPPAPPTPAPAPPAPAAPPAPVK
CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ESAAVSGLASLGNPPPEYPGLALRRSWEGRVILRIKVLPNGRAGAVEVTKSSGKPVLDEA
HHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCCCHHHH
AVEAVRNWKFIPAKRGDTPIEGFATQTIDFKLPE
HHHHHHCCEEEECCCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10689178; 10984043 [H]