| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043380
Identifier: 66043380
GI number: 66043380
Start: 120719
End: 121144
Strand: Direct
Name: 66043380
Synonym: Psyr_0109
Alternate gene names: NA
Gene position: 120719-121144 (Clockwise)
Preceding gene: 66043379
Following gene: 66043381
Centisome position: 1.98
GC content: 42.02
Gene sequence:
>426_bases ATGAATAAAGAGAGCGTGGACTATGAGCTGCTGAACGACATAGTCAAGTGTATTCAAGAAGTGTTTGAATTCAGCAAGGA TGCATTTGAAACTCTCAGCCTGGCCACTGATATCAACCGTGAGCTGGGCATTGAAGGGGATGATGCCAATGAACTGATGC CCGAGTTCTTTGAGCGTTTTTCCATAAATATAGATAACTATGATCCCTACAGGTATTTCGTACCTGAGGGATATGATTTT TTTTCCTTCAGGCGAAGCAAGGACAGGCGCGGCAAGATTCCTATAACTTTGGGTATGCTTTATATGGCTGCTAGAGAAAA AGTCTGGAACACACAGGAGTTAGAAAGCGTGAAGTTTAGTCCTGCTCCGCTTTATAACTGCACGTCTGAGATTCCTTTGG AAGATTATAAGAATAATGATAAGTAG
Upstream 100 bases:
>100_bases TGCTACCTGAACGCACTGGAGTCGAAATCTAGGACTCATCGGCTATAAAACCGTTGTCGCATACAATGCTATTGTATGCG CTGAGGATCAGGTGTTCTGA
Downstream 100 bases:
>100_bases AACCTCTCAACTGCACAAATGCCGAGTGCATCGCGTTACGCTACTCAATGTGGCAGAAGAGGAGCATTCAAACCAGCGCA CCTTTCCGACTGCTAACTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MNKESVDYELLNDIVKCIQEVFEFSKDAFETLSLATDINRELGIEGDDANELMPEFFERFSINIDNYDPYRYFVPEGYDF FSFRRSKDRRGKIPITLGMLYMAAREKVWNTQELESVKFSPAPLYNCTSEIPLEDYKNNDK
Sequences:
>Translated_141_residues MNKESVDYELLNDIVKCIQEVFEFSKDAFETLSLATDINRELGIEGDDANELMPEFFERFSINIDNYDPYRYFVPEGYDF FSFRRSKDRRGKIPITLGMLYMAAREKVWNTQELESVKFSPAPLYNCTSEIPLEDYKNNDK >Mature_141_residues MNKESVDYELLNDIVKCIQEVFEFSKDAFETLSLATDINRELGIEGDDANELMPEFFERFSINIDNYDPYRYFVPEGYDF FSFRRSKDRRGKIPITLGMLYMAAREKVWNTQELESVKFSPAPLYNCTSEIPLEDYKNNDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16646; Mature: 16646
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKESVDYELLNDIVKCIQEVFEFSKDAFETLSLATDINRELGIEGDDANELMPEFFERF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH SINIDNYDPYRYFVPEGYDFFSFRRSKDRRGKIPITLGMLYMAAREKVWNTQELESVKFS CCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCC PAPLYNCTSEIPLEDYKNNDK CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKESVDYELLNDIVKCIQEVFEFSKDAFETLSLATDINRELGIEGDDANELMPEFFERF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH SINIDNYDPYRYFVPEGYDFFSFRRSKDRRGKIPITLGMLYMAAREKVWNTQELESVKFS CCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCC PAPLYNCTSEIPLEDYKNNDK CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA