| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043375
Identifier: 66043375
GI number: 66043375
Start: 115713
End: 116873
Strand: Direct
Name: 66043375
Synonym: Psyr_0104
Alternate gene names: NA
Gene position: 115713-116873 (Clockwise)
Preceding gene: 66043370
Following gene: 66043378
Centisome position: 1.9
GC content: 46.68
Gene sequence:
>1161_bases ATGTCGCTCAAAATATTTGTGAGTTACGCCAAAGAAGACAGGTTGCAAGCACTGAAGTATTACGACCTCCTTGTACATGA TGGCATGGTTCCATGGATCGATGTGAAGCACATCCTGCCGGGACAAAATTGGGAAGCGGAGATCGACAAAGCTTTCCTGG AGGCAAATGTTGTAATGCTGCTGCTTAGCAATAAGAGCGTTAACAAACGTGGTTTCGTTCAAAGGGAGGCAAACGACGCT ATAGAGCGCCTCAGGTACAAACAGCCAACTGACATCTATGTGTTACCTCTACTACTGGAGCAATGTGAGGTACCTACTCA TATATCTGGACGCCTCCAATATATTGATTTAACTACGACGGGAGCATGGATACAGGTTCAAGCATCTCTTCAATTAGCTG CTGAGCAACAGTCCATAGAAATTAAACATGGTTCAAACGCAGGCCCGTTTAAAGTTTTCTCAGAGCAGTTAAAGGATTAT TGGGAAGGCGCCCCTGGGCATGATATTAAAATTGAATATCCTCGCTTTGAGTCGGCCTCTTTGAAGAGCGCCGCAGAAGA ATTATCGCTTTATTTCGGTGGGCGGGCGACTCTAGGGCTGATCAAATCTAGACAGAAGCCTTGGGACCAGCAAAAGGATT TATTCCCGGAAACCGGAGGGTACATATCTCTAAATGGCCGCTGGGATGGGTTCGGGGTCGTACATGCAACCGACGAAATT CTGAGTTTGATTTACGAAGTTAGTTGGTACGGGGCTGGTGCCGCACACCCAAATTCCCATTTTGAAACCTATAATTTTTC CTTACATGAGCGTCTGCTACTTTTGAGTCTCGACGATTTTTTTTGTGACCACACAGCTGCGTTACAACGCATCAGCGAGC TGTGTATCGCAGAGTTGTGTAGGGAGTATTGGAGGAGAACCGGCGAAAAACCCGGTGAAGATCAAGTTGAATGGTTCACG AATGGCGCGGCGGGTACTGAGGAAAATCTCAGTGCATTCACAGTTGGCGCAAACCATTTCACATTTCTATTTGCACCATA CCAAGTGAGCTCCTATGCAGATGGAAGATGGAGCGTGGAAATTTCTTTCTATGACCTTCTGGAATTCCTAAAACCAGATG GGCCCCACACGTACGCAGCGGTAAGGCTAGGTCTGGAATAG
Upstream 100 bases:
>100_bases CCCCTTAGCTAAGTCCCATAACCAAATGTTGATTTCCAGCTAAAGTGTCAGACAGTCGCCCGGTTCAGGGCTCAACGAAA ACCGAAAAGCAGGATGCATC
Downstream 100 bases:
>100_bases GATTGCAGAAGTCCTAACAGTGTATGCCCACATGTATGCCTAACCGAGCATCATCATATAAAACGTGACCTTGCCCCCGA GAAACGTATCCCTTAACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSLKIFVSYAKEDRLQALKYYDLLVHDGMVPWIDVKHILPGQNWEAEIDKAFLEANVVMLLLSNKSVNKRGFVQREANDA IERLRYKQPTDIYVLPLLLEQCEVPTHISGRLQYIDLTTTGAWIQVQASLQLAAEQQSIEIKHGSNAGPFKVFSEQLKDY WEGAPGHDIKIEYPRFESASLKSAAEELSLYFGGRATLGLIKSRQKPWDQQKDLFPETGGYISLNGRWDGFGVVHATDEI LSLIYEVSWYGAGAAHPNSHFETYNFSLHERLLLLSLDDFFCDHTAALQRISELCIAELCREYWRRTGEKPGEDQVEWFT NGAAGTEENLSAFTVGANHFTFLFAPYQVSSYADGRWSVEISFYDLLEFLKPDGPHTYAAVRLGLE
Sequences:
>Translated_386_residues MSLKIFVSYAKEDRLQALKYYDLLVHDGMVPWIDVKHILPGQNWEAEIDKAFLEANVVMLLLSNKSVNKRGFVQREANDA IERLRYKQPTDIYVLPLLLEQCEVPTHISGRLQYIDLTTTGAWIQVQASLQLAAEQQSIEIKHGSNAGPFKVFSEQLKDY WEGAPGHDIKIEYPRFESASLKSAAEELSLYFGGRATLGLIKSRQKPWDQQKDLFPETGGYISLNGRWDGFGVVHATDEI LSLIYEVSWYGAGAAHPNSHFETYNFSLHERLLLLSLDDFFCDHTAALQRISELCIAELCREYWRRTGEKPGEDQVEWFT NGAAGTEENLSAFTVGANHFTFLFAPYQVSSYADGRWSVEISFYDLLEFLKPDGPHTYAAVRLGLE >Mature_385_residues SLKIFVSYAKEDRLQALKYYDLLVHDGMVPWIDVKHILPGQNWEAEIDKAFLEANVVMLLLSNKSVNKRGFVQREANDAI ERLRYKQPTDIYVLPLLLEQCEVPTHISGRLQYIDLTTTGAWIQVQASLQLAAEQQSIEIKHGSNAGPFKVFSEQLKDYW EGAPGHDIKIEYPRFESASLKSAAEELSLYFGGRATLGLIKSRQKPWDQQKDLFPETGGYISLNGRWDGFGVVHATDEIL SLIYEVSWYGAGAAHPNSHFETYNFSLHERLLLLSLDDFFCDHTAALQRISELCIAELCREYWRRTGEKPGEDQVEWFTN GAAGTEENLSAFTVGANHFTFLFAPYQVSSYADGRWSVEISFYDLLEFLKPDGPHTYAAVRLGLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43891; Mature: 43760
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKIFVSYAKEDRLQALKYYDLLVHDGMVPWIDVKHILPGQNWEAEIDKAFLEANVVML CCEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEHCCCCCCCCHHHHHHHHHHCCEEEE LLSNKSVNKRGFVQREANDAIERLRYKQPTDIYVLPLLLEQCEVPTHISGRLQYIDLTTT EEECCCCCCCCCEEHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCCEEEEEEEEEC GAWIQVQASLQLAAEQQSIEIKHGSNAGPFKVFSEQLKDYWEGAPGHDIKIEYPRFESAS CCEEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHH LKSAAEELSLYFGGRATLGLIKSRQKPWDQQKDLFPETGGYISLNGRWDGFGVVHATDEI HHHHHHHHHHEECCCHHHHHHHCCCCCCCHHHCCCCCCCCEEEECCCCCCEEEEECHHHH LSLIYEVSWYGAGAAHPNSHFETYNFSLHERLLLLSLDDFFCDHTAALQRISELCIAELC HHHHHHHHHCCCCCCCCCCCCEEEECCHHHEEEEEEHHHHHCCHHHHHHHHHHHHHHHHH REYWRRTGEKPGEDQVEWFTNGAAGTEENLSAFTVGANHFTFLFAPYQVSSYADGRWSVE HHHHHHCCCCCCCCCHHEEECCCCCCCCCCEEEEECCCCEEEEEECEEECCCCCCEEEEE ISFYDLLEFLKPDGPHTYAAVRLGLE EEHHHHHHHHCCCCCCEEEEEEECCC >Mature Secondary Structure SLKIFVSYAKEDRLQALKYYDLLVHDGMVPWIDVKHILPGQNWEAEIDKAFLEANVVML CEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEHCCCCCCCCHHHHHHHHHHCCEEEE LLSNKSVNKRGFVQREANDAIERLRYKQPTDIYVLPLLLEQCEVPTHISGRLQYIDLTTT EEECCCCCCCCCEEHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCCEEEEEEEEEC GAWIQVQASLQLAAEQQSIEIKHGSNAGPFKVFSEQLKDYWEGAPGHDIKIEYPRFESAS CCEEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHH LKSAAEELSLYFGGRATLGLIKSRQKPWDQQKDLFPETGGYISLNGRWDGFGVVHATDEI HHHHHHHHHHEECCCHHHHHHHCCCCCCCHHHCCCCCCCCEEEECCCCCCEEEEECHHHH LSLIYEVSWYGAGAAHPNSHFETYNFSLHERLLLLSLDDFFCDHTAALQRISELCIAELC HHHHHHHHHCCCCCCCCCCCCEEEECCHHHEEEEEEHHHHHCCHHHHHHHHHHHHHHHHH REYWRRTGEKPGEDQVEWFTNGAAGTEENLSAFTVGANHFTFLFAPYQVSSYADGRWSVE HHHHHHCCCCCCCCCHHEEECCCCCCCCCCEEEEECCCCEEEEEECEEECCCCCCEEEEE ISFYDLLEFLKPDGPHTYAAVRLGLE EEHHHHHHHHCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA